RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 HSD17B4P51659 736 aa20.6■□□□□ 0.89
SSSCA1-201ENST00000309328 RPS6P62753 249 aaKnown RBP20.6■□□□□ 0.89
SSSCA1-201ENST00000309328 ZNF792Q3KQV3 632 aa20.6■□□□□ 0.89
SSSCA1-201ENST00000309328 WWC2Q6AWC2 1192 aa20.6■□□□□ 0.89
SSSCA1-201ENST00000309328 GALNT17Q6IS24 598 aa20.6■□□□□ 0.89
SSSCA1-201ENST00000309328 CCDC83Q8IWF9 413 aa20.6■□□□□ 0.89
SSSCA1-201ENST00000309328 NSUN7Q8NE18 718 aaKnown RBP20.6■□□□□ 0.89
SSSCA1-201ENST00000309328 DNERQ8NFT8 737 aa20.6■□□□□ 0.89
SSSCA1-201ENST00000309328 BICD2Q8TD16 824 aa20.6■□□□□ 0.89
SSSCA1-201ENST00000309328 PSTPIP2Q9H939 334 aa20.6■□□□□ 0.89
SSSCA1-201ENST00000309328 ORC3Q9UBD5 711 aaPredicted RBP20.6■□□□□ 0.89
SSSCA1-201ENST00000309328 STXBP3O00186 592 aa20.59■□□□□ 0.89
SSSCA1-201ENST00000309328 BAATQ14032 418 aaPredicted RBP20.59■□□□□ 0.89
SSSCA1-201ENST00000309328 PKN1Q16512 942 aa20.59■□□□□ 0.89
SSSCA1-201ENST00000309328 HSCBQ8IWL3 235 aa20.59■□□□□ 0.89
SSSCA1-201ENST00000309328 FAM133AQ8N9E0 248 aa20.59■□□□□ 0.89
SSSCA1-201ENST00000309328 C6orf50Q9HD87 102 aa20.59■□□□□ 0.89
SSSCA1-201ENST00000309328 NRBP1Q9UHY1 535 aa20.59■□□□□ 0.89
SSSCA1-201ENST00000309328 GABRQQ9UN88 632 aa20.59■□□□□ 0.89
SSSCA1-201ENST00000309328 hCG_1642624A0A1W2PR95 340 aa20.58■□□□□ 0.89
SSSCA1-201ENST00000309328 ASB14A6NK59 587 aa20.58■□□□□ 0.89
SSSCA1-201ENST00000309328 K7ELQ4 463 aaPredicted RBP20.58■□□□□ 0.89
SSSCA1-201ENST00000309328 CTDNEP1O95476 244 aa20.58■□□□□ 0.89
SSSCA1-201ENST00000309328 CFBP00751 764 aa20.58■□□□□ 0.89
SSSCA1-201ENST00000309328 CYP2B6P20813 491 aa20.58■□□□□ 0.89
SSSCA1-201ENST00000309328 CALML3P27482 149 aa20.58■□□□□ 0.89
SSSCA1-201ENST00000309328 CAP1Q01518 475 aa20.58■□□□□ 0.89
SSSCA1-201ENST00000309328 SMARCC2Q8TAQ2 1214 aa20.58■□□□□ 0.89
SSSCA1-201ENST00000309328 GPKOWQ92917 476 aaPredicted RBP eCLIP20.58■□□□□ 0.89
SSSCA1-201ENST00000309328 ZMYND12Q9H0C1 365 aa20.58■□□□□ 0.89
SSSCA1-201ENST00000309328 RIC8AQ9NPQ8 531 aa20.58■□□□□ 0.89
SSSCA1-201ENST00000309328 SYNGAP1Q96PV0 1343 aa20.57■□□□□ 0.88
SSSCA1-201ENST00000309328 ADCY3O60266 1144 aa20.57■□□□□ 0.88
SSSCA1-201ENST00000309328 COBLO75128 1261 aa20.57■□□□□ 0.88
SSSCA1-201ENST00000309328 ECM2O94769 699 aaPredicted RBP20.57■□□□□ 0.88
SSSCA1-201ENST00000309328 CD2BP2O95400 341 aaKnown RBP20.57■□□□□ 0.88
SSSCA1-201ENST00000309328 HMGCRP04035 888 aa20.57■□□□□ 0.88
SSSCA1-201ENST00000309328 GRK4P32298 578 aa20.57■□□□□ 0.88
SSSCA1-201ENST00000309328 ADCY7P51828 1080 aa20.57■□□□□ 0.88
SSSCA1-201ENST00000309328 MFSD14CQ5VZR4 134 aa20.57■□□□□ 0.88
SSSCA1-201ENST00000309328 MAMDC4Q6UXC1 1216 aa20.57■□□□□ 0.88
SSSCA1-201ENST00000309328 NSUN6Q8TEA1 469 aaKnown RBP20.57■□□□□ 0.88
SSSCA1-201ENST00000309328 MAML3Q96JK9 1138 aa20.57■□□□□ 0.88
SSSCA1-201ENST00000309328 EHMT1Q9H9B1 1298 aa20.57■□□□□ 0.88
SSSCA1-201ENST00000309328 PTCH2Q9Y6C5 1203 aa20.57■□□□□ 0.88
SSSCA1-201ENST00000309328 MGAMO43451 1857 aa20.56■□□□□ 0.88
SSSCA1-201ENST00000309328 SMCO2A6NFE2 343 aa20.56■□□□□ 0.88
SSSCA1-201ENST00000309328 OPLAHO14841 1288 aa20.56■□□□□ 0.88
SSSCA1-201ENST00000309328 FOSP01100 380 aaPredicted RBP20.56■□□□□ 0.88
SSSCA1-201ENST00000309328 PGK2P07205 417 aa20.56■□□□□ 0.88
SSSCA1-201ENST00000309328 SLC9C1Q4G0N8 1177 aa20.56■□□□□ 0.88
SSSCA1-201ENST00000309328 FAM184AQ8NB25 1140 aa20.56■□□□□ 0.88
SSSCA1-201ENST00000309328 SYTL5Q8TDW5 730 aaPredicted RBP20.56■□□□□ 0.88
SSSCA1-201ENST00000309328 IWS1Q96ST2 819 aa20.56■□□□□ 0.88
SSSCA1-201ENST00000309328 CASP8AP2Q9UKL3 1982 aa20.55■□□□□ 0.88
SSSCA1-201ENST00000309328 UBXN2AP68543 259 aa20.55■□□□□ 0.88
SSSCA1-201ENST00000309328 AP3B2Q13367 1082 aa20.55■□□□□ 0.88
SSSCA1-201ENST00000309328 CUL4AQ13619 759 aa20.55■□□□□ 0.88
SSSCA1-201ENST00000309328 TRIM29Q14134 588 aa20.55■□□□□ 0.88
SSSCA1-201ENST00000309328 SLC30A10Q6XR72 485 aa20.55■□□□□ 0.88
SSSCA1-201ENST00000309328 INTS4Q96HW7 963 aaKnown RBP20.55■□□□□ 0.88
SSSCA1-201ENST00000309328 TINF2Q9BSI4 451 aa20.55■□□□□ 0.88
SSSCA1-201ENST00000309328 BAZ2BQ9UIF8 2168 aaKnown RBP20.55■□□□□ 0.88
SSSCA1-201ENST00000309328 SPDYE3A6NKU9 549 aa20.54■□□□□ 0.88
SSSCA1-201ENST00000309328 TAL1P17542 331 aaPredicted RBP20.54■□□□□ 0.88
SSSCA1-201ENST00000309328 NLRP5P59047 1200 aa20.54■□□□□ 0.88
SSSCA1-201ENST00000309328 ST3GAL1Q11201 340 aa20.54■□□□□ 0.88
SSSCA1-201ENST00000309328 NPLOC4Q8TAT6 608 aa20.54■□□□□ 0.88
SSSCA1-201ENST00000309328 ALG1Q9BT22 464 aa20.54■□□□□ 0.88
SSSCA1-201ENST00000309328 BRMS1Q9HCU9 246 aa20.54■□□□□ 0.88
SSSCA1-201ENST00000309328 MEIS2O14770 477 aa20.53■□□□□ 0.88
SSSCA1-201ENST00000309328 XRRA1Q6P2D8 792 aa20.53■□□□□ 0.88
SSSCA1-201ENST00000309328 REXO1Q8N1G1 1221 aaKnown RBP20.53■□□□□ 0.88
SSSCA1-201ENST00000309328 DAGLBQ8NCG7 672 aa20.53■□□□□ 0.88
SSSCA1-201ENST00000309328 MORC4Q8TE76 937 aa20.53■□□□□ 0.88
SSSCA1-201ENST00000309328 ARMC5Q96C12 935 aa20.53■□□□□ 0.88
SSSCA1-201ENST00000309328 RMDN3Q96TC7 470 aa20.53■□□□□ 0.88
SSSCA1-201ENST00000309328 VPS54Q9P1Q0 977 aa20.53■□□□□ 0.88
SSSCA1-201ENST00000309328 CNPY2Q9Y2B0 182 aa20.53■□□□□ 0.88
SSSCA1-201ENST00000309328 PLXNB2O15031 1838 aa20.53■□□□□ 0.88
SSSCA1-201ENST00000309328 JAK2O60674 1132 aa20.52■□□□□ 0.88
SSSCA1-201ENST00000309328 STAM2O75886 525 aa20.52■□□□□ 0.88
SSSCA1-201ENST00000309328 IGHA2P01877 340 aa20.52■□□□□ 0.88
SSSCA1-201ENST00000309328 FDPSP14324 419 aaKnown RBP20.52■□□□□ 0.88
SSSCA1-201ENST00000309328 CAPN2P17655 700 aa20.52■□□□□ 0.88
SSSCA1-201ENST00000309328 ALDH5A1P51649 535 aaPredicted RBP20.52■□□□□ 0.88
SSSCA1-201ENST00000309328 CNTN2Q02246 1040 aa20.52■□□□□ 0.88
SSSCA1-201ENST00000309328 BECN1Q14457 450 aa20.52■□□□□ 0.88
SSSCA1-201ENST00000309328 ARHGEF16Q5VV41 709 aa20.52■□□□□ 0.88
SSSCA1-201ENST00000309328 TYW1BQ6NUM6 668 aa20.52■□□□□ 0.88
SSSCA1-201ENST00000309328 TRIB2Q92519 343 aa20.52■□□□□ 0.88
SSSCA1-201ENST00000309328 MCOLN1Q9GZU1 580 aa20.52■□□□□ 0.88
SSSCA1-201ENST00000309328 BIN2Q9UBW5 565 aaPredicted RBP20.52■□□□□ 0.88
SSSCA1-201ENST00000309328 SMC3Q9UQE7 1217 aa20.52■□□□□ 0.88
SSSCA1-201ENST00000309328 HTTP42858 3142 aa20.52■□□□□ 0.88
SSSCA1-201ENST00000309328 MYH6P13533 1939 aa20.51■□□□□ 0.87
SSSCA1-201ENST00000309328 PPFIA3O75145 1194 aa20.51■□□□□ 0.87
SSSCA1-201ENST00000309328 EDNRBP24530 442 aa20.51■□□□□ 0.87
SSSCA1-201ENST00000309328 HOXA13P31271 388 aaPredicted RBP20.51■□□□□ 0.87
SSSCA1-201ENST00000309328 ABHD16BQ9H3Z7 469 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms