RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 BMS1Q14692 1282 aaKnown RBP9.49□□□□□ -0.89
CHD6-201ENST00000309279 ASPRV1Q53RT3 343 aa9.49□□□□□ -0.89
CHD6-201ENST00000309279 KCTD1Q719H9 257 aa9.49□□□□□ -0.89
CHD6-201ENST00000309279 CATIPQ7Z7H3 387 aa9.49□□□□□ -0.89
CHD6-201ENST00000309279 FAM160B2Q86V87 743 aa9.49□□□□□ -0.89
CHD6-201ENST00000309279 JAZF1Q86VZ6 243 aa9.49□□□□□ -0.89
CHD6-201ENST00000309279 ZNF654Q8IZM8 581 aa9.49□□□□□ -0.89
CHD6-201ENST00000309279 MB21D1Q8N884 522 aa9.49□□□□□ -0.89
CHD6-201ENST00000309279 CHURC1Q8WUH1 139 aa9.49□□□□□ -0.89
CHD6-201ENST00000309279 SLF1Q9BQI6 1058 aa9.49□□□□□ -0.89
CHD6-201ENST00000309279 UPF3BQ9BZI7 483 aaKnown RBP9.49□□□□□ -0.89
CHD6-201ENST00000309279 RBPJLQ9UBG7 517 aa9.49□□□□□ -0.89
CHD6-201ENST00000309279 MAD2L2Q9UI95 211 aa9.49□□□□□ -0.89
CHD6-201ENST00000309279 SLC12A7Q9Y666 1083 aa9.49□□□□□ -0.89
CHD6-201ENST00000309279 GPR25O00155 361 aa9.49□□□□□ -0.89
CHD6-201ENST00000309279 VWA5AO00534 786 aa9.49□□□□□ -0.89
CHD6-201ENST00000309279 FOXN1O15353 648 aa9.49□□□□□ -0.89
CHD6-201ENST00000309279 PARP1P09874 1014 aaKnown RBP9.49□□□□□ -0.89
CHD6-201ENST00000309279 CALM1P0DP23 149 aa9.49□□□□□ -0.89
CHD6-201ENST00000309279 CALM2P0DP24 149 aa9.49□□□□□ -0.89
CHD6-201ENST00000309279 CALM3P0DP25 149 aa9.49□□□□□ -0.89
CHD6-201ENST00000309279 FDX1P10109 184 aa9.49□□□□□ -0.89
CHD6-201ENST00000309279 TAGLNQ01995 201 aaKnown RBP9.49□□□□□ -0.89
CHD6-201ENST00000309279 TOB2Q14106 344 aaPredicted RBP9.49□□□□□ -0.89
CHD6-201ENST00000309279 GRM4Q14833 912 aa9.49□□□□□ -0.89
CHD6-201ENST00000309279 ZRSR2Q15696 482 aaKnown RBP9.49□□□□□ -0.89
CHD6-201ENST00000309279 FAM110CQ1W6H9 321 aa9.49□□□□□ -0.89
CHD6-201ENST00000309279 TSNAXIP1Q2TAA8 658 aa9.49□□□□□ -0.89
CHD6-201ENST00000309279 TTBK2Q6IQ55 1244 aa9.49□□□□□ -0.89
CHD6-201ENST00000309279 APOA5Q6Q788 366 aa9.49□□□□□ -0.89
CHD6-201ENST00000309279 NFXL1Q6ZNB6 911 aa9.49□□□□□ -0.89
CHD6-201ENST00000309279 BRF1Q92994 677 aa9.49□□□□□ -0.89
CHD6-201ENST00000309279 GDPD2Q9HCC8 539 aa9.49□□□□□ -0.89
CHD6-201ENST00000309279 TXNRD2Q9NNW7 524 aa9.49□□□□□ -0.89
CHD6-201ENST00000309279 DDX56Q9NY93 547 aaKnown RBP9.49□□□□□ -0.89
CHD6-201ENST00000309279 MORF4L1Q9UBU8 362 aa9.49□□□□□ -0.89
CHD6-201ENST00000309279 TCEAL9Q9UHQ7 104 aa9.49□□□□□ -0.89
CHD6-201ENST00000309279 RABGAP1Q9Y3P9 1069 aa9.49□□□□□ -0.89
CHD6-201ENST00000309279 BAZ2BQ9UIF8 2168 aaKnown RBP9.48□□□□□ -0.89
CHD6-201ENST00000309279 FRMPD2Q68DX3 1309 aaPredicted RBP9.48□□□□□ -0.89
CHD6-201ENST00000309279 ATP2A1O14983 1001 aa9.48□□□□□ -0.89
CHD6-201ENST00000309279 CNMDO75829 334 aa9.48□□□□□ -0.89
CHD6-201ENST00000309279 GOLGA8HP0CJ92 632 aa9.48□□□□□ -0.89
CHD6-201ENST00000309279 SMARCA1P28370 1054 aa9.48□□□□□ -0.89
CHD6-201ENST00000309279 PPP2R5BQ15173 497 aa9.48□□□□□ -0.89
CHD6-201ENST00000309279 Q3C1V9 767 aa9.48□□□□□ -0.89
CHD6-201ENST00000309279 RNF187Q5TA31 235 aaPredicted RBP9.48□□□□□ -0.89
CHD6-201ENST00000309279 STAG2Q8N3U4 1231 aa9.48□□□□□ -0.89
CHD6-201ENST00000309279 ANKRD13CQ8N6S4 541 aa9.48□□□□□ -0.89
CHD6-201ENST00000309279 FANCBQ8NB91 859 aa9.48□□□□□ -0.89
CHD6-201ENST00000309279 REPS2Q8NFH8 660 aa9.48□□□□□ -0.89
CHD6-201ENST00000309279 GPRC5AQ8NFJ5 357 aa9.48□□□□□ -0.89
CHD6-201ENST00000309279 ATG4CQ96DT6 458 aa9.48□□□□□ -0.89
CHD6-201ENST00000309279 SLC38A10Q9HBR0 1119 aa9.48□□□□□ -0.89
CHD6-201ENST00000309279 PDRG1Q9NUG6 133 aa9.48□□□□□ -0.89
CHD6-201ENST00000309279 TMEM51Q9NW97 253 aa9.48□□□□□ -0.89
CHD6-201ENST00000309279 CPA4Q9UI42 421 aa9.48□□□□□ -0.89
CHD6-201ENST00000309279 DOCK3Q8IZD9 2030 aa9.48□□□□□ -0.89
CHD6-201ENST00000309279 NID2Q14112 1375 aa9.47□□□□□ -0.89
CHD6-201ENST00000309279 CASP8AP2Q9UKL3 1982 aa9.47□□□□□ -0.89
CHD6-201ENST00000309279 SMCHD1A6NHR9 2005 aa9.47□□□□□ -0.89
CHD6-201ENST00000309279 KLRF2D3W0D1 207 aa9.47□□□□□ -0.89
CHD6-201ENST00000309279 HSPA8P11142 646 aaKnown RBP9.47□□□□□ -0.89
CHD6-201ENST00000309279 KIF5BP33176 963 aa9.47□□□□□ -0.89
CHD6-201ENST00000309279 CENPFP49454 3210 aa9.47□□□□□ -0.89
CHD6-201ENST00000309279 CTCFP49711 727 aaPredicted RBP9.47□□□□□ -0.89
CHD6-201ENST00000309279 NEK4P51957 841 aa9.47□□□□□ -0.89
CHD6-201ENST00000309279 OAZ1P54368 228 aa9.47□□□□□ -0.89
CHD6-201ENST00000309279 ERVK-9P63128 1117 aa9.47□□□□□ -0.89
CHD6-201ENST00000309279 ERVK-24P63145 666 aa9.47□□□□□ -0.89
CHD6-201ENST00000309279 SP3Q02447 781 aa9.47□□□□□ -0.89
CHD6-201ENST00000309279 GSE1Q14687 1217 aa9.47□□□□□ -0.89
CHD6-201ENST00000309279 SYNE3Q6ZMZ3 975 aa9.47□□□□□ -0.89
CHD6-201ENST00000309279 ZNF296Q8WUU4 475 aaPredicted RBP9.47□□□□□ -0.89
CHD6-201ENST00000309279 KIFC2Q96AC6 838 aa9.47□□□□□ -0.89
CHD6-201ENST00000309279 CHMP4CQ96CF2 233 aa9.47□□□□□ -0.89
CHD6-201ENST00000309279 ZNF274Q96GC6 653 aaPredicted RBP9.47□□□□□ -0.89
CHD6-201ENST00000309279 MYCBPQ99417 103 aaPredicted RBP9.47□□□□□ -0.89
CHD6-201ENST00000309279 NAP1L4Q99733 375 aaKnown RBP9.47□□□□□ -0.89
CHD6-201ENST00000309279 MYL10Q9BUA6 226 aa9.47□□□□□ -0.89
CHD6-201ENST00000309279 GPCPD1Q9NPB8 672 aa9.47□□□□□ -0.89
CHD6-201ENST00000309279 BTBD7Q9P203 1132 aa9.47□□□□□ -0.89
CHD6-201ENST00000309279 PRKAG2Q9UGJ0 569 aa9.47□□□□□ -0.89
CHD6-201ENST00000309279 DMGDHQ9UI17 866 aaKnown RBP9.47□□□□□ -0.89
CHD6-201ENST00000309279 TSKSQ9UJT2 592 aa9.47□□□□□ -0.89
CHD6-201ENST00000309279 ZNF214Q9UL59 606 aaPredicted RBP9.47□□□□□ -0.89
CHD6-201ENST00000309279 MGAMO43451 1857 aa9.46□□□□□ -0.89
CHD6-201ENST00000309279 MYH6P13533 1939 aa9.46□□□□□ -0.89
CHD6-201ENST00000309279 KLF18A0A0U1RQI7 1052 aa9.46□□□□□ -0.89
CHD6-201ENST00000309279 ANKRD33BA6NCL7 494 aa9.46□□□□□ -0.89
CHD6-201ENST00000309279 ZBTB43O43298 467 aa9.46□□□□□ -0.89
CHD6-201ENST00000309279 TIMM44O43615 452 aa9.46□□□□□ -0.89
CHD6-201ENST00000309279 PEX10O60683 326 aa9.46□□□□□ -0.89
CHD6-201ENST00000309279 SLC16A2P36021 539 aa9.46□□□□□ -0.89
CHD6-201ENST00000309279 APOBRQ0VD83 1088 aa9.46□□□□□ -0.89
CHD6-201ENST00000309279 TMEM132BQ14DG7 1078 aa9.46□□□□□ -0.89
CHD6-201ENST00000309279 RABEP1Q15276 862 aa9.46□□□□□ -0.89
CHD6-201ENST00000309279 ANKRD1Q15327 319 aa9.46□□□□□ -0.89
CHD6-201ENST00000309279 MAP9Q49MG5 647 aa9.46□□□□□ -0.89
CHD6-201ENST00000309279 SYDE2Q5VT97 1194 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms