RNA–Protein interactions for RNA: ENST00000309190.9

CAST-201, Transcript of calpastatin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAST, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-201ENST00000309190 F13A1P00488 732 aa5.6□□□□□ -1.51
CAST-201ENST00000309190 PTPRAP18433 802 aa5.6□□□□□ -1.51
CAST-201ENST00000309190 ATN1P54259 1190 aaPredicted RBP5.6□□□□□ -1.51
CAST-201ENST00000309190 EXOSC10Q01780 885 aaKnown RBP5.6□□□□□ -1.51
CAST-201ENST00000309190 SNW1Q13573 536 aaKnown RBP5.6□□□□□ -1.51
CAST-201ENST00000309190 MUM1L1Q5H9M0 696 aa5.6□□□□□ -1.51
CAST-201ENST00000309190 CST9Q5W186 159 aa5.6□□□□□ -1.51
CAST-201ENST00000309190 NCAPH2Q6IBW4 605 aa5.6□□□□□ -1.51
CAST-201ENST00000309190 TMEM179Q6ZVK1 233 aa5.6□□□□□ -1.51
CAST-201ENST00000309190 C16orf86Q6ZW13 317 aa5.6□□□□□ -1.51
CAST-201ENST00000309190 LDHDQ86WU2 507 aa5.6□□□□□ -1.51
CAST-201ENST00000309190 NEDD1Q8NHV4 660 aa5.6□□□□□ -1.51
CAST-201ENST00000309190 TMEM87BQ96K49 555 aa5.6□□□□□ -1.51
CAST-201ENST00000309190 ARHGAP39Q9C0H5 1083 aa5.6□□□□□ -1.51
CAST-201ENST00000309190 SUGCTQ9HAC7 445 aa5.6□□□□□ -1.51
CAST-201ENST00000309190 BRMS1Q9HCU9 246 aa5.6□□□□□ -1.51
CAST-201ENST00000309190 POLR2AP24928 1970 aaKnown RBP5.6□□□□□ -1.51
CAST-201ENST00000309190 SCG2P13521 617 aa5.6□□□□□ -1.51
CAST-201ENST00000309190 NOLC1Q14978 699 aaKnown RBP eCLIP5.6□□□□□ -1.51
CAST-201ENST00000309190 MTERF4Q7Z6M4 381 aaKnown RBP5.6□□□□□ -1.51
CAST-201ENST00000309190 NAP1L5Q96NT1 182 aaPredicted RBP5.6□□□□□ -1.51
CAST-201ENST00000309190 JMJD4Q9H9V9 463 aa5.6□□□□□ -1.51
CAST-201ENST00000309190 FAM217BQ9NTX9 383 aaPredicted RBP5.6□□□□□ -1.51
CAST-201ENST00000309190 COL4A5P29400 1685 aa5.59□□□□□ -1.51
CAST-201ENST00000309190 TNRC6CQ9HCJ0 1690 aaKnown RBP5.59□□□□□ -1.51
CAST-201ENST00000309190 KIF13BQ9NQT8 1826 aa5.59□□□□□ -1.51
CAST-201ENST00000309190 FOXN1O15353 648 aa5.59□□□□□ -1.51
CAST-201ENST00000309190 SOX10P56693 466 aa5.59□□□□□ -1.51
CAST-201ENST00000309190 PPP4CP60510 307 aa5.59□□□□□ -1.51
CAST-201ENST00000309190 UBE2HP62256 183 aa5.59□□□□□ -1.51
CAST-201ENST00000309190 KRT85P78386 507 aa5.59□□□□□ -1.51
CAST-201ENST00000309190 PTGDRQ13258 359 aa5.59□□□□□ -1.51
CAST-201ENST00000309190 CSPP1Q1MSJ5 1256 aa5.59□□□□□ -1.51
CAST-201ENST00000309190 SLC35G1Q2M3R5 365 aa5.59□□□□□ -1.51
CAST-201ENST00000309190 TRIM50Q86XT4 487 aa5.59□□□□□ -1.51
CAST-201ENST00000309190 SIAH1Q8IUQ4 282 aa5.59□□□□□ -1.51
CAST-201ENST00000309190 TPH2Q8IWU9 490 aa5.59□□□□□ -1.51
CAST-201ENST00000309190 RDH13Q8NBN7 331 aa5.59□□□□□ -1.51
CAST-201ENST00000309190 SPC24Q8NBT2 197 aa5.59□□□□□ -1.51
CAST-201ENST00000309190 ENGASEQ8NFI3 743 aa5.59□□□□□ -1.51
CAST-201ENST00000309190 ELMO3Q96BJ8 720 aa5.59□□□□□ -1.51
CAST-201ENST00000309190 CDK5RAP3Q96JB5 506 aa5.59□□□□□ -1.51
CAST-201ENST00000309190 RNF146Q9NTX7 359 aa5.59□□□□□ -1.51
CAST-201ENST00000309190 TELO2Q9Y4R8 837 aa5.59□□□□□ -1.51
CAST-201ENST00000309190 SCN9AQ15858 1988 aa5.59□□□□□ -1.51
CAST-201ENST00000309190 PDHXO00330 501 aa5.59□□□□□ -1.51
CAST-201ENST00000309190 EVCP57679 992 aa5.59□□□□□ -1.51
CAST-201ENST00000309190 CCDC183Q5T5S1 534 aa5.59□□□□□ -1.51
CAST-201ENST00000309190 DRC7Q8IY82 874 aa5.59□□□□□ -1.51
CAST-201ENST00000309190 REXO1Q8N1G1 1221 aaKnown RBP5.59□□□□□ -1.51
CAST-201ENST00000309190 DPF2Q92785 391 aa5.59□□□□□ -1.51
CAST-201ENST00000309190 COPS5Q92905 334 aa5.59□□□□□ -1.51
CAST-201ENST00000309190 KLRG1Q96E93 195 aa5.59□□□□□ -1.51
CAST-201ENST00000309190 ZSCAN31Q96LW9 406 aaPredicted RBP5.59□□□□□ -1.51
CAST-201ENST00000309190 TRERF1Q96PN7 1200 aa5.59□□□□□ -1.51
CAST-201ENST00000309190 TXNRD2Q9NNW7 524 aa5.59□□□□□ -1.51
CAST-201ENST00000309190 ZNF446Q9NWS9 450 aa5.59□□□□□ -1.51
CAST-201ENST00000309190 RGL1Q9NZL6 768 aa5.59□□□□□ -1.51
CAST-201ENST00000309190 KIF3AQ9Y496 699 aa5.59□□□□□ -1.51
CAST-201ENST00000309190 FOCADQ5VW36 1801 aa5.59□□□□□ -1.51
CAST-201ENST00000309190 WDR33Q9C0J8 1336 aaKnown RBP5.59□□□□□ -1.51
CAST-201ENST00000309190 MAST2Q6P0Q8 1798 aa5.59□□□□□ -1.52
CAST-201ENST00000309190 NHSQ6T4R5 1651 aa5.59□□□□□ -1.52
CAST-201ENST00000309190 THSD7AQ9UPZ6 1657 aa5.59□□□□□ -1.52
CAST-201ENST00000309190 CDKL5O76039 1030 aa5.59□□□□□ -1.52
CAST-201ENST00000309190 KARSQ15046 597 aaKnown RBP5.59□□□□□ -1.52
CAST-201ENST00000309190 ARHGEF16Q5VV41 709 aa5.59□□□□□ -1.52
CAST-201ENST00000309190 PNMA8AQ86V59 439 aaPredicted RBP5.59□□□□□ -1.52
CAST-201ENST00000309190 APOBEC3FQ8IUX4 373 aaKnown RBP5.59□□□□□ -1.52
CAST-201ENST00000309190 ANKRD13AQ8IZ07 590 aa5.59□□□□□ -1.52
CAST-201ENST00000309190 CUL5Q93034 780 aa5.59□□□□□ -1.52
CAST-201ENST00000309190 RMDN3Q96TC7 470 aa5.59□□□□□ -1.52
CAST-201ENST00000309190 GOPCQ9HD26 462 aa5.59□□□□□ -1.52
CAST-201ENST00000309190 EMILIN3Q9NT22 766 aa5.59□□□□□ -1.52
CAST-201ENST00000309190 MORC2Q9Y6X9 1032 aaPredicted RBP5.59□□□□□ -1.52
CAST-201ENST00000309190 MYH6P13533 1939 aa5.58□□□□□ -1.52
CAST-201ENST00000309190 GVINP1Q7Z2Y8 2422 aa5.58□□□□□ -1.52
CAST-201ENST00000309190 TRIOO75962 3097 aa5.58□□□□□ -1.52
CAST-201ENST00000309190 POLR2DO15514 142 aaKnown RBP5.58□□□□□ -1.52
CAST-201ENST00000309190 SLFN14P0C7P3 912 aa5.58□□□□□ -1.52
CAST-201ENST00000309190 MLLT3P42568 568 aaPredicted RBP5.58□□□□□ -1.52
CAST-201ENST00000309190 PPP1R18Q6NYC8 613 aa5.58□□□□□ -1.52
CAST-201ENST00000309190 CCDC73Q6ZRK6 1079 aa5.58□□□□□ -1.52
CAST-201ENST00000309190 RNF169Q8NCN4 708 aa5.58□□□□□ -1.52
CAST-201ENST00000309190 FAM84AQ96KN4 292 aa5.58□□□□□ -1.52
CAST-201ENST00000309190 TEPSINQ96N21 525 aa5.58□□□□□ -1.52
CAST-201ENST00000309190 TAAR1Q96RJ0 339 aa5.58□□□□□ -1.52
CAST-201ENST00000309190 TSPY26PQ9H489 355 aa5.58□□□□□ -1.52
CAST-201ENST00000309190 SH2B1Q9NRF2 756 aaPredicted RBP5.58□□□□□ -1.52
CAST-201ENST00000309190 MAD2L2Q9UI95 211 aa5.58□□□□□ -1.52
CAST-201ENST00000309190 MYO3BQ8WXR4 1341 aa5.58□□□□□ -1.52
CAST-201ENST00000309190 NID2Q14112 1375 aa5.58□□□□□ -1.52
CAST-201ENST00000309190 UNCXA6NJT0 531 aa5.58□□□□□ -1.52
CAST-201ENST00000309190 TULP2O00295 520 aa5.58□□□□□ -1.52
CAST-201ENST00000309190 PFKFB2O60825 505 aa5.58□□□□□ -1.52
CAST-201ENST00000309190 ZBED4O75132 1171 aa5.58□□□□□ -1.52
CAST-201ENST00000309190 BACE1P56817 501 aa5.58□□□□□ -1.52
CAST-201ENST00000309190 RPS6P62753 249 aaKnown RBP5.58□□□□□ -1.52
CAST-201ENST00000309190 KIF23Q02241 960 aaPredicted RBP5.58□□□□□ -1.52
CAST-201ENST00000309190 FBXO18Q8NFZ0 1043 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms