RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 AOC2O75106 756 aa6.15□□□□□ -1.42
CKS1B-201ENST00000308987 TNFRSF21O75509 655 aa6.15□□□□□ -1.42
CKS1B-201ENST00000308987 EIF1AXP47813 144 aaKnown RBP6.15□□□□□ -1.42
CKS1B-201ENST00000308987 TEFQ10587 303 aa6.15□□□□□ -1.42
CKS1B-201ENST00000308987 HLFQ16534 295 aa6.15□□□□□ -1.42
CKS1B-201ENST00000308987 ANGEL2Q5VTE6 544 aaKnown RBP6.15□□□□□ -1.42
CKS1B-201ENST00000308987 LDHDQ86WU2 507 aa6.15□□□□□ -1.42
CKS1B-201ENST00000308987 TTC5Q8N0Z6 440 aa6.15□□□□□ -1.42
CKS1B-201ENST00000308987 CLEC4MQ9H2X3 399 aaPredicted RBP6.15□□□□□ -1.42
CKS1B-201ENST00000308987 PRDM10Q9NQV6 1147 aa6.15□□□□□ -1.42
CKS1B-201ENST00000308987 RAPGEFL1Q9UHV5 662 aa6.15□□□□□ -1.42
CKS1B-201ENST00000308987 POLIQ9UNA4 740 aa6.15□□□□□ -1.42
CKS1B-201ENST00000308987 PLAGL2Q9UPG8 496 aa6.15□□□□□ -1.42
CKS1B-201ENST00000308987 ANKRD36CQ5JPF3 1778 aa6.15□□□□□ -1.43
CKS1B-201ENST00000308987 ABCC12Q96J65 1359 aa6.15□□□□□ -1.43
CKS1B-201ENST00000308987 TMEM265A0A087WTH1 108 aa6.14□□□□□ -1.43
CKS1B-201ENST00000308987 FZD9O00144 591 aa6.14□□□□□ -1.43
CKS1B-201ENST00000308987 U2SURPO15042 1029 aaKnown RBP6.14□□□□□ -1.43
CKS1B-201ENST00000308987 HSPA8P11142 646 aaKnown RBP6.14□□□□□ -1.43
CKS1B-201ENST00000308987 LBX1P52954 281 aa6.14□□□□□ -1.43
CKS1B-201ENST00000308987 OXCT1P55809 520 aa6.14□□□□□ -1.43
CKS1B-201ENST00000308987 FKBP4Q02790 459 aaKnown RBP eCLIP6.14□□□□□ -1.43
CKS1B-201ENST00000308987 MTMR3Q13615 1198 aa6.14□□□□□ -1.43
CKS1B-201ENST00000308987 DCTN1Q14203 1278 aa6.14□□□□□ -1.43
CKS1B-201ENST00000308987 PDE3AQ14432 1141 aa6.14□□□□□ -1.43
CKS1B-201ENST00000308987 MAP1SQ66K74 1059 aaPredicted RBP6.14□□□□□ -1.43
CKS1B-201ENST00000308987 MCM10Q7L590 875 aa6.14□□□□□ -1.43
CKS1B-201ENST00000308987 PBXIP1Q96AQ6 731 aa6.14□□□□□ -1.43
CKS1B-201ENST00000308987 CORO1BQ9BR76 489 aa6.14□□□□□ -1.43
CKS1B-201ENST00000308987 TRIM56Q9BRZ2 755 aaKnown RBP6.14□□□□□ -1.43
CKS1B-201ENST00000308987 TEX13AQ9BXU3 409 aaPredicted RBP6.14□□□□□ -1.43
CKS1B-201ENST00000308987 MKNK2Q9HBH9 465 aa6.14□□□□□ -1.43
CKS1B-201ENST00000308987 FOXD3Q9UJU5 478 aaPredicted RBP6.14□□□□□ -1.43
CKS1B-201ENST00000308987 RASSF10A6NK89 507 aa6.13□□□□□ -1.43
CKS1B-201ENST00000308987 TMEM88BA6NKF7 163 aa6.13□□□□□ -1.43
CKS1B-201ENST00000308987 LEFTY1O75610 366 aa6.13□□□□□ -1.43
CKS1B-201ENST00000308987 KRT1P04264 644 aa6.13□□□□□ -1.43
CKS1B-201ENST00000308987 C1QTNF9P0C862 333 aa6.13□□□□□ -1.43
CKS1B-201ENST00000308987 NPR1P16066 1061 aa6.13□□□□□ -1.43
CKS1B-201ENST00000308987 PRKAR2BP31323 418 aa6.13□□□□□ -1.43
CKS1B-201ENST00000308987 EPHX2P34913 555 aa6.13□□□□□ -1.43
CKS1B-201ENST00000308987 CTCFP49711 727 aaPredicted RBP6.13□□□□□ -1.43
CKS1B-201ENST00000308987 ST5P78524 1137 aa6.13□□□□□ -1.43
CKS1B-201ENST00000308987 SPRED3Q2MJR0 410 aa6.13□□□□□ -1.43
CKS1B-201ENST00000308987 CCDC93Q567U6 631 aa6.13□□□□□ -1.43
CKS1B-201ENST00000308987 EAPPQ56P03 285 aaPredicted RBP6.13□□□□□ -1.43
CKS1B-201ENST00000308987 FYB2Q5VWT5 728 aa6.13□□□□□ -1.43
CKS1B-201ENST00000308987 CLEC4GQ6UXB4 293 aa6.13□□□□□ -1.43
CKS1B-201ENST00000308987 PRR23BQ6ZRT6 265 aa6.13□□□□□ -1.43
CKS1B-201ENST00000308987 NBPF5PQ86XG9 351 aaPredicted RBP6.13□□□□□ -1.43
CKS1B-201ENST00000308987 SYNE4Q8N205 404 aa6.13□□□□□ -1.43
CKS1B-201ENST00000308987 SNX29Q8TEQ0 813 aa6.13□□□□□ -1.43
CKS1B-201ENST00000308987 GTF3C2Q8WUA4 911 aaPredicted RBP6.13□□□□□ -1.43
CKS1B-201ENST00000308987 WDR18Q9BV38 432 aa6.13□□□□□ -1.43
CKS1B-201ENST00000308987 MIS18AQ9NYP9 233 aa6.13□□□□□ -1.43
CKS1B-201ENST00000308987 NIP7Q9Y221 180 aaKnown RBP eCLIP6.13□□□□□ -1.43
CKS1B-201ENST00000308987 COL4A1P02462 1669 aa6.13□□□□□ -1.43
CKS1B-201ENST00000308987 IQCA1LA6NCM1 817 aa6.12□□□□□ -1.43
CKS1B-201ENST00000308987 PLIN1O60240 522 aa6.12□□□□□ -1.43
CKS1B-201ENST00000308987 POLR3DP05423 398 aaPredicted RBP6.12□□□□□ -1.43
CKS1B-201ENST00000308987 CEACAM5P06731 702 aa6.12□□□□□ -1.43
CKS1B-201ENST00000308987 NEFMP07197 916 aa6.12□□□□□ -1.43
CKS1B-201ENST00000308987 IARSP41252 1262 aaKnown RBP6.12□□□□□ -1.43
CKS1B-201ENST00000308987 SCN9AQ15858 1988 aa6.12□□□□□ -1.43
CKS1B-201ENST00000308987 CRY2Q49AN0 593 aa6.12□□□□□ -1.43
CKS1B-201ENST00000308987 SOGA3Q5TF21 947 aa6.12□□□□□ -1.43
CKS1B-201ENST00000308987 CST9Q5W186 159 aa6.12□□□□□ -1.43
CKS1B-201ENST00000308987 ALKBH2Q6NS38 261 aa6.12□□□□□ -1.43
CKS1B-201ENST00000308987 TTLL7Q6ZT98 887 aa6.12□□□□□ -1.43
CKS1B-201ENST00000308987 UBN2Q6ZU65 1347 aa6.12□□□□□ -1.43
CKS1B-201ENST00000308987 CNTROBQ8N137 903 aa6.12□□□□□ -1.43
CKS1B-201ENST00000308987 HACL1Q9UJ83 578 aa6.12□□□□□ -1.43
CKS1B-201ENST00000308987 MAPK8IP3Q9UPT6 1336 aa6.12□□□□□ -1.43
CKS1B-201ENST00000308987 CTNND2Q9UQB3 1225 aa6.12□□□□□ -1.43
CKS1B-201ENST00000308987 AKAP11Q9UKA4 1901 aa6.11□□□□□ -1.43
CKS1B-201ENST00000308987 DDX60Q8IY21 1712 aaKnown RBP6.11□□□□□ -1.43
CKS1B-201ENST00000308987 RIC1Q4ADV7 1423 aa6.11□□□□□ -1.43
CKS1B-201ENST00000308987 SYNGAP1Q96PV0 1343 aa6.11□□□□□ -1.43
CKS1B-201ENST00000308987 WDR33Q9C0J8 1336 aaKnown RBP6.11□□□□□ -1.43
CKS1B-201ENST00000308987 TRAF5O00463 557 aa6.11□□□□□ -1.43
CKS1B-201ENST00000308987 ABL1P00519 1130 aa6.11□□□□□ -1.43
CKS1B-201ENST00000308987 SNRPA1P09661 255 aaKnown RBP6.11□□□□□ -1.43
CKS1B-201ENST00000308987 EPS15P42566 896 aa6.11□□□□□ -1.43
CKS1B-201ENST00000308987 GRIA4P48058 902 aa6.11□□□□□ -1.43
CKS1B-201ENST00000308987 CCDC27Q2M243 656 aa6.11□□□□□ -1.43
CKS1B-201ENST00000308987 DEFB115Q30KQ5 88 aa6.11□□□□□ -1.43
CKS1B-201ENST00000308987 NPM2Q86SE8 214 aaKnown RBP6.11□□□□□ -1.43
CKS1B-201ENST00000308987 CCNJLQ8IV13 435 aa6.11□□□□□ -1.43
CKS1B-201ENST00000308987 ABHD8Q96I13 439 aa6.11□□□□□ -1.43
CKS1B-201ENST00000308987 DDX21Q9NR30 783 aaKnown RBP eCLIP6.11□□□□□ -1.43
CKS1B-201ENST00000308987 DUOX1Q9NRD9 1551 aa6.1□□□□□ -1.43
CKS1B-201ENST00000308987 NPHP1O15259 732 aa6.1□□□□□ -1.43
CKS1B-201ENST00000308987 TMPRSS2O15393 492 aa6.1□□□□□ -1.43
CKS1B-201ENST00000308987 CT47B1P0C2W7 299 aaPredicted RBP6.1□□□□□ -1.43
CKS1B-201ENST00000308987 EHHADHQ08426 723 aa6.1□□□□□ -1.43
CKS1B-201ENST00000308987 C20orf194Q5TEA3 1177 aa6.1□□□□□ -1.43
CKS1B-201ENST00000308987 CYP4F22Q6NT55 531 aa6.1□□□□□ -1.43
CKS1B-201ENST00000308987 TPTE2Q6XPS3 522 aa6.1□□□□□ -1.43
CKS1B-201ENST00000308987 LRP10Q7Z4F1 713 aa6.1□□□□□ -1.43
CKS1B-201ENST00000308987 WDR63Q8IWG1 891 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms