RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 ENOPH1Q9UHY7 261 aa4.39□□□□□ -1.71
USH2A-201ENST00000307340 CHMP2BQ9UQN3 213 aa4.39□□□□□ -1.71
USH2A-201ENST00000307340 STXBP3O00186 592 aa4.39□□□□□ -1.71
USH2A-201ENST00000307340 RANBP6O60518 1105 aaKnown RBP4.39□□□□□ -1.71
USH2A-201ENST00000307340 USP14P54578 494 aa4.39□□□□□ -1.71
USH2A-201ENST00000307340 NAPAP54920 295 aa4.39□□□□□ -1.71
USH2A-201ENST00000307340 ZBTB16Q05516 673 aa4.39□□□□□ -1.71
USH2A-201ENST00000307340 LTV1Q96GA3 475 aaPredicted RBP4.39□□□□□ -1.71
USH2A-201ENST00000307340 FAM169AQ9Y6X4 670 aa4.39□□□□□ -1.71
USH2A-201ENST00000307340 PFKFB2O60825 505 aa4.39□□□□□ -1.71
USH2A-201ENST00000307340 IL9RQ01113 521 aa4.39□□□□□ -1.71
USH2A-201ENST00000307340 TBC1D8BQ0IIM8 1120 aa4.39□□□□□ -1.71
USH2A-201ENST00000307340 MAGEB5Q9BZ81 275 aa4.39□□□□□ -1.71
USH2A-201ENST00000307340 RICTORQ6R327 1708 aa4.39□□□□□ -1.71
USH2A-201ENST00000307340 MTSS1O43312 755 aa4.39□□□□□ -1.71
USH2A-201ENST00000307340 ZFXP17010 805 aaPredicted RBP4.39□□□□□ -1.71
USH2A-201ENST00000307340 DNAJB2P25686 324 aa4.39□□□□□ -1.71
USH2A-201ENST00000307340 NSFP46459 744 aaKnown RBP4.39□□□□□ -1.71
USH2A-201ENST00000307340 SLC9C2Q5TAH2 1124 aa4.39□□□□□ -1.71
USH2A-201ENST00000307340 THAP9Q9H5L6 903 aa4.39□□□□□ -1.71
USH2A-201ENST00000307340 EPS8L2Q9H6S3 715 aa4.39□□□□□ -1.71
USH2A-201ENST00000307340 USP31Q70CQ4 1352 aa4.39□□□□□ -1.71
USH2A-201ENST00000307340 PDS5AQ29RF7 1337 aaKnown RBP4.38□□□□□ -1.71
USH2A-201ENST00000307340 A0A1W2PQC6 194 aa4.38□□□□□ -1.71
USH2A-201ENST00000307340 CES2O00748 559 aa4.38□□□□□ -1.71
USH2A-201ENST00000307340 H2AFYO75367 372 aaKnown RBP4.38□□□□□ -1.71
USH2A-201ENST00000307340 SPATA1Q5VX52 437 aa4.38□□□□□ -1.71
USH2A-201ENST00000307340 BBS5Q8N3I7 341 aa4.38□□□□□ -1.71
USH2A-201ENST00000307340 TEX9Q8N6V9 391 aa4.38□□□□□ -1.71
USH2A-201ENST00000307340 VPS33BQ9H267 617 aa4.38□□□□□ -1.71
USH2A-201ENST00000307340 STK39Q9UEW8 545 aa4.38□□□□□ -1.71
USH2A-201ENST00000307340 INTUQ9ULD6 942 aa4.38□□□□□ -1.71
USH2A-201ENST00000307340 CIITAP33076 1130 aa4.38□□□□□ -1.71
USH2A-201ENST00000307340 EPAS1Q99814 870 aa4.38□□□□□ -1.71
USH2A-201ENST00000307340 VEZTQ9HBM0 779 aa4.38□□□□□ -1.71
USH2A-201ENST00000307340 GGA2Q9UJY4 613 aa4.38□□□□□ -1.71
USH2A-201ENST00000307340 LTN1O94822 1766 aa4.38□□□□□ -1.71
USH2A-201ENST00000307340 KRT3P12035 628 aa4.38□□□□□ -1.71
USH2A-201ENST00000307340 SND1Q7KZF4 910 aaKnown RBP eCLIP4.38□□□□□ -1.71
USH2A-201ENST00000307340 DGKHQ86XP1 1220 aa4.38□□□□□ -1.71
USH2A-201ENST00000307340 CABS1Q96KC9 395 aa4.38□□□□□ -1.71
USH2A-201ENST00000307340 TSPAN18Q96SJ8 248 aa4.38□□□□□ -1.71
USH2A-201ENST00000307340 NACA2Q9H009 215 aa4.38□□□□□ -1.71
USH2A-201ENST00000307340 NALCNQ8IZF0 1738 aa4.38□□□□□ -1.71
USH2A-201ENST00000307340 PRR29P0C7W0 189 aa4.38□□□□□ -1.71
USH2A-201ENST00000307340 HSPA13P48723 471 aa4.38□□□□□ -1.71
USH2A-201ENST00000307340 LRRC37BQ96QE4 947 aa4.38□□□□□ -1.71
USH2A-201ENST00000307340 E7ENQ6 273 aa4.38□□□□□ -1.71
USH2A-201ENST00000307340 ARMC3Q5W041 872 aa4.38□□□□□ -1.71
USH2A-201ENST00000307340 NDUFA13Q9P0J0 144 aa4.38□□□□□ -1.71
USH2A-201ENST00000307340 VPS9D1Q9Y2B5 631 aa4.38□□□□□ -1.71
USH2A-201ENST00000307340 ATP8B3O60423 1300 aa4.38□□□□□ -1.71
USH2A-201ENST00000307340 N4BP2Q86UW6 1770 aaPredicted RBP4.38□□□□□ -1.71
USH2A-201ENST00000307340 ARHGAP10A1A4S6 786 aa4.38□□□□□ -1.71
USH2A-201ENST00000307340 IGF2BP3O00425 579 aaKnown RBP eCLIP4.38□□□□□ -1.71
USH2A-201ENST00000307340 RPS6KA1Q15418 735 aa4.38□□□□□ -1.71
USH2A-201ENST00000307340 YY1AP1Q9H869 796 aa4.38□□□□□ -1.71
USH2A-201ENST00000307340 AGTPBP1Q9UPW5 1226 aa4.38□□□□□ -1.71
USH2A-201ENST00000307340 ITIH6Q6UXX5 1313 aa4.38□□□□□ -1.71
USH2A-201ENST00000307340 ADGRF5Q8IZF2 1346 aa4.38□□□□□ -1.71
USH2A-201ENST00000307340 CENPKQ9BS16 269 aa4.38□□□□□ -1.71
USH2A-201ENST00000307340 MAP3K13O43283 966 aa4.38□□□□□ -1.71
USH2A-201ENST00000307340 GARSP41250 739 aaKnown RBP4.38□□□□□ -1.71
USH2A-201ENST00000307340 ASIC1P78348 528 aa4.38□□□□□ -1.71
USH2A-201ENST00000307340 CALCRLQ16602 461 aa4.38□□□□□ -1.71
USH2A-201ENST00000307340 CNBD1Q8NA66 436 aa4.38□□□□□ -1.71
USH2A-201ENST00000307340 VWDEQ8N2E2 1590 aa4.38□□□□□ -1.71
USH2A-201ENST00000307340 PALM3A6NDB9 673 aaPredicted RBP4.38□□□□□ -1.71
USH2A-201ENST00000307340 SFNP31947 248 aa4.38□□□□□ -1.71
USH2A-201ENST00000307340 ARHGDIAP52565 204 aa4.38□□□□□ -1.71
USH2A-201ENST00000307340 MYL6P60660 151 aa4.38□□□□□ -1.71
USH2A-201ENST00000307340 ARMCX3Q9UH62 379 aaPredicted RBP4.38□□□□□ -1.71
USH2A-201ENST00000307340 IDEP14735 1019 aa4.38□□□□□ -1.71
USH2A-201ENST00000307340 C4BPBP20851 252 aa4.38□□□□□ -1.71
USH2A-201ENST00000307340 KCNB1Q14721 858 aa4.38□□□□□ -1.71
USH2A-201ENST00000307340 DDB1Q16531 1140 aa4.38□□□□□ -1.71
USH2A-201ENST00000307340 ZNF449Q6P9G9 518 aa4.38□□□□□ -1.71
USH2A-201ENST00000307340 IGSF22Q8N9C0 903 aa4.38□□□□□ -1.71
USH2A-201ENST00000307340 HNRNPLLQ8WVV9 542 aaKnown RBP4.38□□□□□ -1.71
USH2A-201ENST00000307340 SAMM50Q9Y512 469 aa4.38□□□□□ -1.71
USH2A-201ENST00000307340 EIF2S1P05198 315 aaKnown RBP4.38□□□□□ -1.71
USH2A-201ENST00000307340 SLC1A1P43005 524 aa4.38□□□□□ -1.71
USH2A-201ENST00000307340 HK2P52789 917 aa4.38□□□□□ -1.71
USH2A-201ENST00000307340 AK2P54819 239 aa4.38□□□□□ -1.71
USH2A-201ENST00000307340 NEK8Q86SG6 692 aa4.38□□□□□ -1.71
USH2A-201ENST00000307340 NBPF5PQ86XG9 351 aaPredicted RBP4.38□□□□□ -1.71
USH2A-201ENST00000307340 OLFM3Q96PB7 478 aa4.38□□□□□ -1.71
USH2A-201ENST00000307340 KLF18A0A0U1RQI7 1052 aa4.38□□□□□ -1.71
USH2A-201ENST00000307340 KCNA6P17658 529 aa4.38□□□□□ -1.71
USH2A-201ENST00000307340 USP13Q92995 863 aaPredicted RBP4.38□□□□□ -1.71
USH2A-201ENST00000307340 BOLA2Q9H3K6 86 aa4.38□□□□□ -1.71
USH2A-201ENST00000307340 FLT1P17948 1338 aa4.38□□□□□ -1.71
USH2A-201ENST00000307340 ENO4A6NNW6 628 aa4.38□□□□□ -1.71
USH2A-201ENST00000307340 TMEM232C9JQI7 657 aa4.38□□□□□ -1.71
USH2A-201ENST00000307340 PHACTR2O75167 634 aa4.38□□□□□ -1.71
USH2A-201ENST00000307340 PYGBP11216 843 aa4.38□□□□□ -1.71
USH2A-201ENST00000307340 HCLS1P14317 486 aaPredicted RBP4.38□□□□□ -1.71
USH2A-201ENST00000307340 PRLRP16471 622 aa4.38□□□□□ -1.71
USH2A-201ENST00000307340 ANKRD20A4Q4UJ75 823 aa4.38□□□□□ -1.71
USH2A-201ENST00000307340 ANKRD20A8PQ5CZ79 823 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms