RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 NFX1Q12986 1120 aaKnown RBP11.79□□□□□ -0.52
SYNPO2-201ENST00000307142 SEPT2Q15019 361 aa11.79□□□□□ -0.52
SYNPO2-201ENST00000307142 TAF1CQ15572 869 aaPredicted RBP11.79□□□□□ -0.52
SYNPO2-201ENST00000307142 SLC9C1Q4G0N8 1177 aa11.79□□□□□ -0.52
SYNPO2-201ENST00000307142 ANGEL2Q5VTE6 544 aaKnown RBP11.79□□□□□ -0.52
SYNPO2-201ENST00000307142 POLIQ9UNA4 740 aa11.79□□□□□ -0.52
SYNPO2-201ENST00000307142 CDHR2Q9BYE9 1310 aa11.79□□□□□ -0.52
SYNPO2-201ENST00000307142 CTAGE15A4D2H0 777 aa11.79□□□□□ -0.52
SYNPO2-201ENST00000307142 CTAGE8P0CG41 777 aa11.79□□□□□ -0.52
SYNPO2-201ENST00000307142 ELF1P32519 619 aa11.79□□□□□ -0.52
SYNPO2-201ENST00000307142 OSTNP61366 133 aa11.79□□□□□ -0.52
SYNPO2-201ENST00000307142 CTAGE6Q86UF2 777 aa11.79□□□□□ -0.52
SYNPO2-201ENST00000307142 CTAGE4Q8IX94 777 aa11.79□□□□□ -0.52
SYNPO2-201ENST00000307142 MLKLQ8NB16 471 aa11.79□□□□□ -0.52
SYNPO2-201ENST00000307142 ZFYVE28Q9HCC9 887 aa11.79□□□□□ -0.52
SYNPO2-201ENST00000307142 ZSWIM6Q9HCJ5 1215 aa11.79□□□□□ -0.52
SYNPO2-201ENST00000307142 ZSWIM5Q9P217 1185 aa11.79□□□□□ -0.52
SYNPO2-201ENST00000307142 CTTNBP2NLQ9P2B4 639 aa11.79□□□□□ -0.52
SYNPO2-201ENST00000307142 FBXO40Q9UH90 709 aa11.79□□□□□ -0.52
SYNPO2-201ENST00000307142 CRCPO75575 148 aa11.79□□□□□ -0.52
SYNPO2-201ENST00000307142 SCRN1Q12765 414 aa11.79□□□□□ -0.52
SYNPO2-201ENST00000307142 TRIM14Q14142 442 aa11.79□□□□□ -0.52
SYNPO2-201ENST00000307142 NACC1Q96RE7 527 aa11.79□□□□□ -0.52
SYNPO2-201ENST00000307142 NLRP12P59046 1061 aa11.79□□□□□ -0.52
SYNPO2-201ENST00000307142 KDM4FA0A1W2PPD8 638 aa11.79□□□□□ -0.52
SYNPO2-201ENST00000307142 TYW5A2RUC4 315 aaKnown RBP11.79□□□□□ -0.52
SYNPO2-201ENST00000307142 DENND3A2RUS2 1198 aa11.79□□□□□ -0.52
SYNPO2-201ENST00000307142 SMIM23A6NLE4 172 aa11.79□□□□□ -0.52
SYNPO2-201ENST00000307142 LMNB1P20700 586 aa11.79□□□□□ -0.52
SYNPO2-201ENST00000307142 STYK1Q6J9G0 422 aa11.79□□□□□ -0.52
SYNPO2-201ENST00000307142 GIMAP8Q8ND71 665 aaPredicted RBP11.79□□□□□ -0.52
SYNPO2-201ENST00000307142 RMDN3Q96TC7 470 aa11.79□□□□□ -0.52
SYNPO2-201ENST00000307142 LACTBP83111 547 aaPredicted RBP11.79□□□□□ -0.52
SYNPO2-201ENST00000307142 TBC1D16Q8TBP0 767 aa11.79□□□□□ -0.52
SYNPO2-201ENST00000307142 LBHD1Q9BQE6 289 aaPredicted RBP11.79□□□□□ -0.52
SYNPO2-201ENST00000307142 RPAP3Q9H6T3 665 aaPredicted RBP11.79□□□□□ -0.52
SYNPO2-201ENST00000307142 STAM2O75886 525 aa11.78□□□□□ -0.52
SYNPO2-201ENST00000307142 RNASE9P60153 205 aaKnown RBP11.78□□□□□ -0.52
SYNPO2-201ENST00000307142 GEN1Q17RS7 908 aa11.78□□□□□ -0.52
SYNPO2-201ENST00000307142 CACTINQ8WUQ7 758 aaKnown RBP11.78□□□□□ -0.52
SYNPO2-201ENST00000307142 SLC39A2Q9NP94 309 aa11.78□□□□□ -0.52
SYNPO2-201ENST00000307142 PSMD14O00487 310 aa11.78□□□□□ -0.52
SYNPO2-201ENST00000307142 RSBN1LQ6PCB5 846 aaPredicted RBP11.78□□□□□ -0.52
SYNPO2-201ENST00000307142 SLC17A8Q8NDX2 589 aa11.78□□□□□ -0.52
SYNPO2-201ENST00000307142 FRMPD1Q5SYB0 1578 aa11.78□□□□□ -0.52
SYNPO2-201ENST00000307142 IFT81Q8WYA0 676 aa11.78□□□□□ -0.52
SYNPO2-201ENST00000307142 BAG1Q99933 345 aaPredicted RBP11.78□□□□□ -0.52
SYNPO2-201ENST00000307142 GGA3Q9NZ52 723 aa11.78□□□□□ -0.52
SYNPO2-201ENST00000307142 IGKV5-2P06315 115 aa11.78□□□□□ -0.52
SYNPO2-201ENST00000307142 SNAPC2Q13487 334 aa11.78□□□□□ -0.52
SYNPO2-201ENST00000307142 SFMBT2Q5VUG0 894 aa11.78□□□□□ -0.52
SYNPO2-201ENST00000307142 PTPREP23469 700 aa11.78□□□□□ -0.52
SYNPO2-201ENST00000307142 NKX1-1Q15270 411 aaPredicted RBP11.78□□□□□ -0.52
SYNPO2-201ENST00000307142 CYP26C1Q6V0L0 522 aa11.78□□□□□ -0.52
SYNPO2-201ENST00000307142 TRIM50Q86XT4 487 aa11.78□□□□□ -0.52
SYNPO2-201ENST00000307142 PDCL2Q8N4E4 241 aa11.78□□□□□ -0.52
SYNPO2-201ENST00000307142 ZNF853P0CG23 659 aa11.78□□□□□ -0.52
SYNPO2-201ENST00000307142 SREBF2Q12772 1141 aa11.78□□□□□ -0.52
SYNPO2-201ENST00000307142 TTLL4Q14679 1199 aa11.78□□□□□ -0.52
SYNPO2-201ENST00000307142 TTC30AQ86WT1 665 aa11.78□□□□□ -0.52
SYNPO2-201ENST00000307142 SLC16A10Q8TF71 515 aa11.78□□□□□ -0.52
SYNPO2-201ENST00000307142 CCT6BQ92526 530 aa11.78□□□□□ -0.52
SYNPO2-201ENST00000307142 MTFR1LQ9H019 292 aa11.78□□□□□ -0.52
SYNPO2-201ENST00000307142 SPDYE16A6NNV3 312 aaPredicted RBP11.77□□□□□ -0.52
SYNPO2-201ENST00000307142 SLU7O95391 586 aaKnown RBP11.77□□□□□ -0.52
SYNPO2-201ENST00000307142 CYP2E1P05181 493 aaPredicted RBP11.77□□□□□ -0.52
SYNPO2-201ENST00000307142 HUNKP57058 714 aa11.77□□□□□ -0.52
SYNPO2-201ENST00000307142 SPDYE2Q495Y8 402 aa11.77□□□□□ -0.52
SYNPO2-201ENST00000307142 MYSM1Q5VVJ2 828 aa11.77□□□□□ -0.52
SYNPO2-201ENST00000307142 PNMA8AQ86V59 439 aaPredicted RBP11.77□□□□□ -0.52
SYNPO2-201ENST00000307142 GABPB2Q8TAK5 448 aaPredicted RBP11.77□□□□□ -0.52
SYNPO2-201ENST00000307142 SYMPKQ92797 1274 aaKnown RBP11.77□□□□□ -0.52
SYNPO2-201ENST00000307142 N4BP1O75113 896 aaKnown RBP11.77□□□□□ -0.52
SYNPO2-201ENST00000307142 LONP1P36776 959 aaKnown RBP11.77□□□□□ -0.52
SYNPO2-201ENST00000307142 GMPSP49915 693 aaPredicted RBP11.77□□□□□ -0.52
SYNPO2-201ENST00000307142 KLHL30Q0D2K2 578 aa11.77□□□□□ -0.52
SYNPO2-201ENST00000307142 STRIP1Q5VSL9 837 aa11.77□□□□□ -0.52
SYNPO2-201ENST00000307142 PRAMEF18Q5VWM3 479 aa11.77□□□□□ -0.52
SYNPO2-201ENST00000307142 C9orf131Q5VYM1 1079 aa11.77□□□□□ -0.52
SYNPO2-201ENST00000307142 CASC4Q6P4E1 433 aa11.77□□□□□ -0.52
SYNPO2-201ENST00000307142 RNF26Q9BY78 433 aaPredicted RBP11.77□□□□□ -0.52
SYNPO2-201ENST00000307142 UTYO14607 1347 aa11.77□□□□□ -0.53
SYNPO2-201ENST00000307142 PPP2R5CQ13362 524 aa11.77□□□□□ -0.53
SYNPO2-201ENST00000307142 MTMR2Q13614 643 aa11.77□□□□□ -0.53
SYNPO2-201ENST00000307142 EPHA10Q5JZY3 1008 aa11.77□□□□□ -0.53
SYNPO2-201ENST00000307142 NAP1L3Q99457 506 aaPredicted RBP11.77□□□□□ -0.53
SYNPO2-201ENST00000307142 LMTK2Q8IWU2 1503 aa11.77□□□□□ -0.53
SYNPO2-201ENST00000307142 MTMR1Q13613 665 aa11.77□□□□□ -0.53
SYNPO2-201ENST00000307142 C4orf50Q6ZRC1 276 aa11.77□□□□□ -0.53
SYNPO2-201ENST00000307142 TBC1D31Q96DN5 1066 aa11.77□□□□□ -0.53
SYNPO2-201ENST00000307142 hCG_1984214I3L0E3 225 aa11.77□□□□□ -0.53
SYNPO2-201ENST00000307142 APOA5Q6Q788 366 aa11.77□□□□□ -0.53
SYNPO2-201ENST00000307142 TRMT44Q8IYL2 757 aaKnown RBP11.77□□□□□ -0.53
SYNPO2-201ENST00000307142 ZNF713Q8N859 430 aaPredicted RBP11.77□□□□□ -0.53
SYNPO2-201ENST00000307142 ZFP91Q96JP5 570 aaPredicted RBP11.77□□□□□ -0.53
SYNPO2-201ENST00000307142 FAM207AQ9NSI2 230 aaPredicted RBP11.77□□□□□ -0.53
SYNPO2-201ENST00000307142 SCAF8Q9UPN6 1271 aaKnown RBP11.77□□□□□ -0.53
SYNPO2-201ENST00000307142 KBTBD13C9JR72 458 aa11.77□□□□□ -0.53
SYNPO2-201ENST00000307142 CALCOCO2Q13137 446 aa11.77□□□□□ -0.53
SYNPO2-201ENST00000307142 ADALQ6DHV7 355 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms