RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 CD58P19256 250 aa13.8□□□□□ -0.2
USP38-201ENST00000307017 MTMR3Q13615 1198 aa13.8□□□□□ -0.2
USP38-201ENST00000307017 CCNYQ8ND76 341 aa13.8□□□□□ -0.2
USP38-201ENST00000307017 APPBP2Q92624 585 aa13.8□□□□□ -0.2
USP38-201ENST00000307017 USP40Q9NVE5 1235 aa13.8□□□□□ -0.2
USP38-201ENST00000307017 EYA2O00167 538 aa13.79□□□□□ -0.2
USP38-201ENST00000307017 ACSL3O95573 720 aa13.79□□□□□ -0.2
USP38-201ENST00000307017 KRT14P02533 472 aa13.79□□□□□ -0.2
USP38-201ENST00000307017 ZWILCHQ9H900 591 aa13.79□□□□□ -0.2
USP38-201ENST00000307017 ACTN1P12814 892 aa13.79□□□□□ -0.2
USP38-201ENST00000307017 PLS3P13797 630 aa13.79□□□□□ -0.2
USP38-201ENST00000307017 ATXN3P54252 364 aaPredicted RBP13.79□□□□□ -0.2
USP38-201ENST00000307017 PTGDRQ13258 359 aa13.79□□□□□ -0.2
USP38-201ENST00000307017 FAM182BQ5T319 152 aa13.79□□□□□ -0.2
USP38-201ENST00000307017 ZNF654Q8IZM8 581 aa13.79□□□□□ -0.2
USP38-201ENST00000307017 SAMSN1Q9NSI8 373 aaKnown RBP13.79□□□□□ -0.2
USP38-201ENST00000307017 GGA1Q9UJY5 639 aa13.79□□□□□ -0.2
USP38-201ENST00000307017 SUFUQ9UMX1 484 aa13.79□□□□□ -0.2
USP38-201ENST00000307017 NOVA2Q9UNW9 492 aaKnown RBP13.79□□□□□ -0.2
USP38-201ENST00000307017 EXOC7Q9UPT5 735 aa13.79□□□□□ -0.2
USP38-201ENST00000307017 GOLGA8CPA6NN73 597 aa13.79□□□□□ -0.2
USP38-201ENST00000307017 MARK3P27448 753 aa13.79□□□□□ -0.2
USP38-201ENST00000307017 TBC1D1Q86TI0 1168 aaPredicted RBP13.79□□□□□ -0.2
USP38-201ENST00000307017 ZNF507Q8TCN5 953 aa13.79□□□□□ -0.2
USP38-201ENST00000307017 ZNF668Q96K58 619 aaPredicted RBP13.79□□□□□ -0.2
USP38-201ENST00000307017 YIPF3Q9GZM5 350 aa13.79□□□□□ -0.2
USP38-201ENST00000307017 A0A1W2PP64 1363 aa13.79□□□□□ -0.2
USP38-201ENST00000307017 LRRD1A4D1F6 860 aa13.79□□□□□ -0.2
USP38-201ENST00000307017 KRT3P12035 628 aa13.79□□□□□ -0.2
USP38-201ENST00000307017 ADAM9Q13443 819 aa13.79□□□□□ -0.2
USP38-201ENST00000307017 DMTNQ08495 405 aa13.79□□□□□ -0.2
USP38-201ENST00000307017 MAGOHBQ96A72 148 aaKnown RBP13.79□□□□□ -0.2
USP38-201ENST00000307017 CD109Q6YHK3 1445 aa13.79□□□□□ -0.2
USP38-201ENST00000307017 PABPC4Q13310 644 aaKnown RBP eCLIP13.78□□□□□ -0.2
USP38-201ENST00000307017 SEPT9Q9UHD8 586 aaPredicted RBP13.78□□□□□ -0.2
USP38-201ENST00000307017 KIAA1024Q9UPX6 916 aa13.78□□□□□ -0.2
USP38-201ENST00000307017 MAGI1Q96QZ7 1491 aaPredicted RBP13.78□□□□□ -0.2
USP38-201ENST00000307017 NPATQ14207 1427 aa13.78□□□□□ -0.2
USP38-201ENST00000307017 CLRN2A0PK11 232 aa13.78□□□□□ -0.2
USP38-201ENST00000307017 BASP1P80723 227 aaKnown RBP13.78□□□□□ -0.2
USP38-201ENST00000307017 C10orf76Q5T2E6 689 aa13.78□□□□□ -0.2
USP38-201ENST00000307017 MYOCDQ8IZQ8 938 aa13.78□□□□□ -0.2
USP38-201ENST00000307017 PI4K2BQ8TCG2 481 aa13.78□□□□□ -0.2
USP38-201ENST00000307017 TMEM87BQ96K49 555 aa13.78□□□□□ -0.2
USP38-201ENST00000307017 TESK2Q96S53 571 aa13.78□□□□□ -0.2
USP38-201ENST00000307017 SMAD5Q99717 465 aaKnown RBP13.78□□□□□ -0.2
USP38-201ENST00000307017 METTL22Q9BUU2 404 aaPredicted RBP13.78□□□□□ -0.2
USP38-201ENST00000307017 RNF168Q8IYW5 571 aaPredicted RBP13.78□□□□□ -0.2
USP38-201ENST00000307017 PRPF31Q8WWY3 499 aaKnown RBP13.78□□□□□ -0.2
USP38-201ENST00000307017 AIFM3Q96NN9 605 aa13.78□□□□□ -0.2
USP38-201ENST00000307017 NBPF3Q9H094 633 aa13.78□□□□□ -0.2
USP38-201ENST00000307017 PRDM5Q9NQX1 630 aaPredicted RBP13.78□□□□□ -0.2
USP38-201ENST00000307017 DAB2P98082 770 aa13.78□□□□□ -0.2
USP38-201ENST00000307017 NSUN2Q08J23 767 aaKnown RBP eCLIP13.78□□□□□ -0.2
USP38-201ENST00000307017 ZNF790Q6PG37 636 aa13.78□□□□□ -0.2
USP38-201ENST00000307017 NCAPG2Q86XI2 1143 aa13.78□□□□□ -0.2
USP38-201ENST00000307017 MLXIPQ9HAP2 919 aa13.78□□□□□ -0.2
USP38-201ENST00000307017 LGSNQ5TDP6 509 aa13.78□□□□□ -0.2
USP38-201ENST00000307017 CACYBPQ9HB71 228 aaKnown RBP13.78□□□□□ -0.2
USP38-201ENST00000307017 UBN1Q9NPG3 1134 aa13.78□□□□□ -0.2
USP38-201ENST00000307017 CYP2D7A0A087X1C5 515 aa13.78□□□□□ -0.2
USP38-201ENST00000307017 UBAP1LF5GYI3 381 aa13.78□□□□□ -0.2
USP38-201ENST00000307017 GSTA4O15217 222 aa13.78□□□□□ -0.2
USP38-201ENST00000307017 KIAA0825Q8IV33 1275 aa13.78□□□□□ -0.2
USP38-201ENST00000307017 REXO1Q8N1G1 1221 aaKnown RBP13.78□□□□□ -0.2
USP38-201ENST00000307017 OR8K1Q8NGG5 319 aa13.78□□□□□ -0.2
USP38-201ENST00000307017 RIC8AQ9NPQ8 531 aa13.78□□□□□ -0.2
USP38-201ENST00000307017 SCHIP1Q9P0W5 487 aaPredicted RBP13.78□□□□□ -0.2
USP38-201ENST00000307017 THOC2Q8NI27 1593 aaKnown RBP13.77□□□□□ -0.2
USP38-201ENST00000307017 SART1O43290 800 aaKnown RBP13.77□□□□□ -0.2
USP38-201ENST00000307017 DYNLL1P63167 89 aaKnown RBP13.77□□□□□ -0.2
USP38-201ENST00000307017 UBE3AQ05086 875 aa13.77□□□□□ -0.2
USP38-201ENST00000307017 ARMCX5Q6P1M9 558 aa13.77□□□□□ -0.2
USP38-201ENST00000307017 SRGAP1Q7Z6B7 1085 aa13.77□□□□□ -0.2
USP38-201ENST00000307017 C7orf31Q8N865 590 aa13.77□□□□□ -0.2
USP38-201ENST00000307017 MYL7Q01449 175 aa13.77□□□□□ -0.2
USP38-201ENST00000307017 CCDC85BQ15834 202 aaPredicted RBP13.77□□□□□ -0.2
USP38-201ENST00000307017 TTC6Q86TZ1 520 aa13.77□□□□□ -0.2
USP38-201ENST00000307017 PASD1Q8IV76 773 aa13.77□□□□□ -0.2
USP38-201ENST00000307017 PCDHA12Q9UN75 941 aa13.77□□□□□ -0.2
USP38-201ENST00000307017 PHBP35232 272 aa13.77□□□□□ -0.21
USP38-201ENST00000307017 PDE1BQ01064 536 aa13.77□□□□□ -0.21
USP38-201ENST00000307017 CYP27A1Q02318 531 aa13.77□□□□□ -0.21
USP38-201ENST00000307017 ATP6V1E2Q96A05 226 aa13.77□□□□□ -0.21
USP38-201ENST00000307017 RALGAPBQ86X10 1494 aa13.77□□□□□ -0.21
USP38-201ENST00000307017 PPP2R5EQ16537 467 aa13.77□□□□□ -0.21
USP38-201ENST00000307017 PSTPIP2Q9H939 334 aa13.77□□□□□ -0.21
USP38-201ENST00000307017 PRAMEF22A3QJZ6 481 aa13.77□□□□□ -0.21
USP38-201ENST00000307017 INHBAP08476 426 aa13.77□□□□□ -0.21
USP38-201ENST00000307017 PLCB4Q15147 1175 aa13.77□□□□□ -0.21
USP38-201ENST00000307017 ZSCAN10Q96SZ4 725 aaPredicted RBP13.77□□□□□ -0.21
USP38-201ENST00000307017 PARP2Q9UGN5 583 aa13.77□□□□□ -0.21
USP38-201ENST00000307017 HEXIM1O94992 359 aaKnown RBP13.76□□□□□ -0.21
USP38-201ENST00000307017 DDIT3P35638 169 aa13.76□□□□□ -0.21
USP38-201ENST00000307017 UBE2SQ16763 222 aa13.76□□□□□ -0.21
USP38-201ENST00000307017 TRIM58Q8NG06 486 aa13.76□□□□□ -0.21
USP38-201ENST00000307017 GOLGA5Q8TBA6 731 aa13.76□□□□□ -0.21
USP38-201ENST00000307017 TEKT1Q969V4 418 aa13.76□□□□□ -0.21
USP38-201ENST00000307017 NUMBP49757 651 aa13.76□□□□□ -0.21
USP38-201ENST00000307017 HVCN1Q96D96 273 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms