RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 TMOD2Q9NZR1 351 aa7.39□□□□□ -1.23
USP47-201ENST00000305481 GDAQ9Y2T3 454 aa7.39□□□□□ -1.23
USP47-201ENST00000305481 NFKBIEO00221 500 aa7.38□□□□□ -1.23
USP47-201ENST00000305481 MEIS2O14770 477 aa7.38□□□□□ -1.23
USP47-201ENST00000305481 FXR2P51116 673 aaKnown RBP eCLIP7.38□□□□□ -1.23
USP47-201ENST00000305481 ZNF658Q5TYW1 1059 aaPredicted RBP7.38□□□□□ -1.23
USP47-201ENST00000305481 BTNL9Q6UXG8 535 aa7.38□□□□□ -1.23
USP47-201ENST00000305481 SCAF8Q9UPN6 1271 aaKnown RBP7.38□□□□□ -1.23
USP47-201ENST00000305481 SYNRGQ9UMZ2 1314 aa7.38□□□□□ -1.23
USP47-201ENST00000305481 MYH7BA7E2Y1 1941 aa7.38□□□□□ -1.23
USP47-201ENST00000305481 WNT10BO00744 389 aa7.38□□□□□ -1.23
USP47-201ENST00000305481 OPLAHO14841 1288 aa7.38□□□□□ -1.23
USP47-201ENST00000305481 CBFA2T2O43439 604 aa7.38□□□□□ -1.23
USP47-201ENST00000305481 EGFRP00533 1210 aa7.38□□□□□ -1.23
USP47-201ENST00000305481 PRCPP42785 496 aa7.38□□□□□ -1.23
USP47-201ENST00000305481 GRB10Q13322 594 aa7.38□□□□□ -1.23
USP47-201ENST00000305481 NR1I3Q14994 352 aa7.38□□□□□ -1.23
USP47-201ENST00000305481 KMT5BQ4FZB7 885 aa7.38□□□□□ -1.23
USP47-201ENST00000305481 DALRD3Q5D0E6 543 aaKnown RBP7.38□□□□□ -1.23
USP47-201ENST00000305481 FKBP1CQ5VVH2 108 aa7.38□□□□□ -1.23
USP47-201ENST00000305481 MIGA2Q7L4E1 593 aa7.38□□□□□ -1.23
USP47-201ENST00000305481 RASSF8Q8NHQ8 419 aa7.38□□□□□ -1.23
USP47-201ENST00000305481 CRYGNQ8WXF5 182 aa7.38□□□□□ -1.23
USP47-201ENST00000305481 PNMA5Q96PV4 448 aa7.38□□□□□ -1.23
USP47-201ENST00000305481 NUDT12Q9BQG2 462 aa7.38□□□□□ -1.23
USP47-201ENST00000305481 VEZTQ9HBM0 779 aa7.38□□□□□ -1.23
USP47-201ENST00000305481 CTNND2Q9UQB3 1225 aa7.38□□□□□ -1.23
USP47-201ENST00000305481 BRCA1P38398 1863 aaKnown RBP7.38□□□□□ -1.23
USP47-201ENST00000305481 FER1L6Q2WGJ9 1857 aa7.38□□□□□ -1.23
USP47-201ENST00000305481 POTEMA6NI47 508 aa7.38□□□□□ -1.23
USP47-201ENST00000305481 BMP3P12645 472 aa7.38□□□□□ -1.23
USP47-201ENST00000305481 GOLGA8FQ08AF8 430 aa7.38□□□□□ -1.23
USP47-201ENST00000305481 GOLGA8DPQ0D2H9 430 aa7.38□□□□□ -1.23
USP47-201ENST00000305481 TBX2Q13207 712 aaPredicted RBP7.38□□□□□ -1.23
USP47-201ENST00000305481 SYDE2Q5VT97 1194 aa7.38□□□□□ -1.23
USP47-201ENST00000305481 BLOC1S4Q9NUP1 217 aa7.38□□□□□ -1.23
USP47-201ENST00000305481 DDX25Q9UHL0 483 aaKnown RBP7.38□□□□□ -1.23
USP47-201ENST00000305481 ZBTB21Q9ULJ3 1066 aa7.38□□□□□ -1.23
USP47-201ENST00000305481 MAPK8IP1Q9UQF2 711 aa7.38□□□□□ -1.23
USP47-201ENST00000305481 TMX2Q9Y320 296 aa7.38□□□□□ -1.23
USP47-201ENST00000305481 A0A1B0GTH6 734 aa7.37□□□□□ -1.23
USP47-201ENST00000305481 TBC1D12O60347 775 aa7.37□□□□□ -1.23
USP47-201ENST00000305481 CDK11BP21127 795 aaKnown RBP7.37□□□□□ -1.23
USP47-201ENST00000305481 PDIA5Q14554 519 aa7.37□□□□□ -1.23
USP47-201ENST00000305481 KCNB1Q14721 858 aa7.37□□□□□ -1.23
USP47-201ENST00000305481 DNTTIP2Q5QJE6 756 aaKnown RBP7.37□□□□□ -1.23
USP47-201ENST00000305481 CCDC150Q8NCX0 1101 aa7.37□□□□□ -1.23
USP47-201ENST00000305481 LRWD1Q9UFC0 647 aa7.37□□□□□ -1.23
USP47-201ENST00000305481 RWDD2AQ9UIY3 292 aa7.37□□□□□ -1.23
USP47-201ENST00000305481 SYNPO2Q9UMS6 1093 aa7.37□□□□□ -1.23
USP47-201ENST00000305481 TEX33O43247 280 aa7.37□□□□□ -1.23
USP47-201ENST00000305481 RHOBTB3O94955 611 aa7.37□□□□□ -1.23
USP47-201ENST00000305481 MYL1P05976 194 aa7.37□□□□□ -1.23
USP47-201ENST00000305481 PRELPP51888 382 aa7.37□□□□□ -1.23
USP47-201ENST00000305481 TERF1P54274 439 aa7.37□□□□□ -1.23
USP47-201ENST00000305481 PMS1P54277 932 aaKnown RBP7.37□□□□□ -1.23
USP47-201ENST00000305481 MAP3K10Q02779 954 aa7.37□□□□□ -1.23
USP47-201ENST00000305481 ECM1Q16610 540 aa7.37□□□□□ -1.23
USP47-201ENST00000305481 FAM83AQ86UY5 434 aa7.37□□□□□ -1.23
USP47-201ENST00000305481 ADSSL1Q8N142 457 aa7.37□□□□□ -1.23
USP47-201ENST00000305481 UIMC1Q96RL1 719 aa7.37□□□□□ -1.23
USP47-201ENST00000305481 AMNQ9BXJ7 453 aa7.37□□□□□ -1.23
USP47-201ENST00000305481 TRIM9Q9C026 710 aa7.37□□□□□ -1.23
USP47-201ENST00000305481 TAOK3Q9H2K8 898 aa7.37□□□□□ -1.23
USP47-201ENST00000305481 TMX1Q9H3N1 280 aa7.37□□□□□ -1.23
USP47-201ENST00000305481 CUEDC2Q9H467 287 aa7.37□□□□□ -1.23
USP47-201ENST00000305481 MYOZ2Q9NPC6 264 aa7.37□□□□□ -1.23
USP47-201ENST00000305481 RMND1Q9NWS8 449 aa7.37□□□□□ -1.23
USP47-201ENST00000305481 PRR12Q9ULL5 1215 aa7.37□□□□□ -1.23
USP47-201ENST00000305481 SMCHD1A6NHR9 2005 aa7.37□□□□□ -1.23
USP47-201ENST00000305481 SFPQP23246 707 aaKnown RBP eCLIP7.36□□□□□ -1.23
USP47-201ENST00000305481 MMP14P50281 582 aa7.36□□□□□ -1.23
USP47-201ENST00000305481 USH1GQ495M9 461 aa7.36□□□□□ -1.23
USP47-201ENST00000305481 CIAPIN1Q6FI81 312 aa7.36□□□□□ -1.23
USP47-201ENST00000305481 KCNK18Q7Z418 384 aa7.36□□□□□ -1.23
USP47-201ENST00000305481 FBXO11Q86XK2 927 aa7.36□□□□□ -1.23
USP47-201ENST00000305481 GIMAP8Q8ND71 665 aaPredicted RBP7.36□□□□□ -1.23
USP47-201ENST00000305481 NELFBQ8WX92 580 aa7.36□□□□□ -1.23
USP47-201ENST00000305481 C7orf25Q9BPX7 421 aa7.36□□□□□ -1.23
USP47-201ENST00000305481 GLIS2Q9BZE0 524 aaPredicted RBP7.36□□□□□ -1.23
USP47-201ENST00000305481 MTFR1LQ9H019 292 aa7.36□□□□□ -1.23
USP47-201ENST00000305481 KCND1Q9NSA2 647 aa7.36□□□□□ -1.23
USP47-201ENST00000305481 ADD3Q9UEY8 706 aaKnown RBP7.36□□□□□ -1.23
USP47-201ENST00000305481 CYP3A7-CYP3A51PA0A087WV96 503 aa7.36□□□□□ -1.23
USP47-201ENST00000305481 CYP3A7P24462 503 aa7.36□□□□□ -1.23
USP47-201ENST00000305481 CAP2P40123 477 aa7.36□□□□□ -1.23
USP47-201ENST00000305481 PAK1Q13153 545 aa7.36□□□□□ -1.23
USP47-201ENST00000305481 E4F1Q66K89 784 aaPredicted RBP7.36□□□□□ -1.23
USP47-201ENST00000305481 TMEM139Q8IV31 216 aa7.36□□□□□ -1.23
USP47-201ENST00000305481 C16orf45Q96MC5 204 aaPredicted RBP7.36□□□□□ -1.23
USP47-201ENST00000305481 MBOAT7Q96N66 472 aa7.36□□□□□ -1.23
USP47-201ENST00000305481 SGIP1Q9BQI5 828 aa7.36□□□□□ -1.23
USP47-201ENST00000305481 ANO3Q9BYT9 981 aa7.36□□□□□ -1.23
USP47-201ENST00000305481 TRIM49BA6NDI0 452 aa7.36□□□□□ -1.23
USP47-201ENST00000305481 GCFC2P16383 781 aaKnown RBP7.36□□□□□ -1.23
USP47-201ENST00000305481 PBX1P40424 430 aa7.36□□□□□ -1.23
USP47-201ENST00000305481 USP11P51784 963 aa7.36□□□□□ -1.23
USP47-201ENST00000305481 IKQ13123 557 aaPredicted RBP7.36□□□□□ -1.23
USP47-201ENST00000305481 FAM83BQ5T0W9 1011 aa7.36□□□□□ -1.23
USP47-201ENST00000305481 SPECC1LQ69YQ0 1117 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms