RNA–Protein interactions for RNA: ENST00000302731.4

CLP1-201, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 2 BASIC

Gene CLP1, Length 1,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-201ENST00000302731 SPICE1Q8N0Z3 855 aa11.97□□□□□ -0.49
CLP1-201ENST00000302731 CRYGNQ8WXF5 182 aa11.97□□□□□ -0.49
CLP1-201ENST00000302731 DEFB129Q9H1M3 183 aa11.97□□□□□ -0.49
CLP1-201ENST00000302731 KBTBD4Q9NVX7 518 aa11.97□□□□□ -0.49
CLP1-201ENST00000302731 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.97□□□□□ -0.49
CLP1-201ENST00000302731 PPP2R3BQ9Y5P8 575 aa11.97□□□□□ -0.49
CLP1-201ENST00000302731 ATAD5Q96QE3 1844 aa11.96□□□□□ -0.49
CLP1-201ENST00000302731 USP17L15C9J2P7 530 aa11.96□□□□□ -0.5
CLP1-201ENST00000302731 USP17L13C9JLJ4 530 aa11.96□□□□□ -0.5
CLP1-201ENST00000302731 USP17L11C9JVI0 530 aa11.96□□□□□ -0.5
CLP1-201ENST00000302731 USP17L18D6R9N7 530 aa11.96□□□□□ -0.5
CLP1-201ENST00000302731 USP17L22D6RA61 530 aa11.96□□□□□ -0.5
CLP1-201ENST00000302731 USP17L17D6RBQ6 530 aa11.96□□□□□ -0.5
CLP1-201ENST00000302731 USP17L19D6RCP7 530 aa11.96□□□□□ -0.5
CLP1-201ENST00000302731 USP17L20D6RJB6 530 aa11.96□□□□□ -0.5
CLP1-201ENST00000302731 SLC37A4O43826 429 aa11.96□□□□□ -0.5
CLP1-201ENST00000302731 TDP2O95551 362 aa11.96□□□□□ -0.5
CLP1-201ENST00000302731 USP17L24Q0WX57 530 aa11.96□□□□□ -0.5
CLP1-201ENST00000302731 TBC1D10BQ4KMP7 808 aaPredicted RBP11.96□□□□□ -0.5
CLP1-201ENST00000302731 USP17L6PQ6QN14 398 aa11.96□□□□□ -0.5
CLP1-201ENST00000302731 MTRQ99707 1265 aa11.96□□□□□ -0.5
CLP1-201ENST00000302731 GTPBP4Q9BZE4 634 aaKnown RBP11.96□□□□□ -0.5
CLP1-201ENST00000302731 KIAA1683Q9H0B3 1180 aa11.96□□□□□ -0.5
CLP1-201ENST00000302731 GPRC5DQ9NZD1 345 aa11.96□□□□□ -0.5
CLP1-201ENST00000302731 DDX25Q9UHL0 483 aaKnown RBP11.96□□□□□ -0.5
CLP1-201ENST00000302731 SPDYE3A6NKU9 549 aa11.95□□□□□ -0.5
CLP1-201ENST00000302731 TBX3O15119 743 aa11.95□□□□□ -0.5
CLP1-201ENST00000302731 WDR46O15213 610 aaKnown RBP11.95□□□□□ -0.5
CLP1-201ENST00000302731 CDC25AP30304 524 aa11.95□□□□□ -0.5
CLP1-201ENST00000302731 SREBF1P36956 1147 aa11.95□□□□□ -0.5
CLP1-201ENST00000302731 TECP42680 631 aa11.95□□□□□ -0.5
CLP1-201ENST00000302731 DHX8Q14562 1220 aaKnown RBP11.95□□□□□ -0.5
CLP1-201ENST00000302731 KCNB1Q14721 858 aa11.95□□□□□ -0.5
CLP1-201ENST00000302731 RASSF8Q8NHQ8 419 aa11.95□□□□□ -0.5
CLP1-201ENST00000302731 CALML4Q96GE6 196 aa11.95□□□□□ -0.5
CLP1-201ENST00000302731 HSD3B7Q9H2F3 369 aa11.95□□□□□ -0.5
CLP1-201ENST00000302731 STK17AQ9UEE5 414 aa11.95□□□□□ -0.5
CLP1-201ENST00000302731 ZNF112Q9UJU3 913 aa11.95□□□□□ -0.5
CLP1-201ENST00000302731 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.95□□□□□ -0.5
CLP1-201ENST00000302731 MYH7BA7E2Y1 1941 aa11.95□□□□□ -0.5
CLP1-201ENST00000302731 PP2D1A8MPX8 630 aa11.94□□□□□ -0.5
CLP1-201ENST00000302731 CBFA2T2O43439 604 aa11.94□□□□□ -0.5
CLP1-201ENST00000302731 HOXA7P31268 230 aaPredicted RBP11.94□□□□□ -0.5
CLP1-201ENST00000302731 CIITAP33076 1130 aa11.94□□□□□ -0.5
CLP1-201ENST00000302731 TXKP42681 527 aa11.94□□□□□ -0.5
CLP1-201ENST00000302731 AMPD3Q01432 767 aa11.94□□□□□ -0.5
CLP1-201ENST00000302731 DRC7Q8IY82 874 aa11.94□□□□□ -0.5
CLP1-201ENST00000302731 SLFN12Q8IYM2 578 aa11.94□□□□□ -0.5
CLP1-201ENST00000302731 MMTAG2Q9BU76 263 aaKnown RBP11.94□□□□□ -0.5
CLP1-201ENST00000302731 ZNF341Q9BYN7 854 aa11.94□□□□□ -0.5
CLP1-201ENST00000302731 KCNMB3Q9NPA1 279 aa11.94□□□□□ -0.5
CLP1-201ENST00000302731 IMPACTQ9P2X3 320 aa11.94□□□□□ -0.5
CLP1-201ENST00000302731 LRWD1Q9UFC0 647 aa11.94□□□□□ -0.5
CLP1-201ENST00000302731 PNMA2Q9UL42 364 aa11.94□□□□□ -0.5
CLP1-201ENST00000302731 MRPL11Q9Y3B7 192 aaKnown RBP11.94□□□□□ -0.5
CLP1-201ENST00000302731 ABCB11O95342 1321 aa11.94□□□□□ -0.5
CLP1-201ENST00000302731 OPLAHO14841 1288 aa11.93□□□□□ -0.5
CLP1-201ENST00000302731 RPN1P04843 607 aaKnown RBP11.93□□□□□ -0.5
CLP1-201ENST00000302731 CYP3A4P08684 503 aa11.93□□□□□ -0.5
CLP1-201ENST00000302731 PLCG1P19174 1290 aa11.93□□□□□ -0.5
CLP1-201ENST00000302731 USP14P54578 494 aa11.93□□□□□ -0.5
CLP1-201ENST00000302731 ARHGAP4P98171 946 aa11.93□□□□□ -0.5
CLP1-201ENST00000302731 CUL4BQ13620 913 aa11.93□□□□□ -0.5
CLP1-201ENST00000302731 USH1GQ495M9 461 aa11.93□□□□□ -0.5
CLP1-201ENST00000302731 Q4G0T1 1027 aa11.93□□□□□ -0.5
CLP1-201ENST00000302731 ZNF658Q5TYW1 1059 aaPredicted RBP11.93□□□□□ -0.5
CLP1-201ENST00000302731 ARHGAP27Q6ZUM4 889 aa11.93□□□□□ -0.5
CLP1-201ENST00000302731 SPC24Q8NBT2 197 aa11.93□□□□□ -0.5
CLP1-201ENST00000302731 HAS1Q92839 578 aa11.93□□□□□ -0.5
CLP1-201ENST00000302731 FEZ1Q99689 392 aa11.93□□□□□ -0.5
CLP1-201ENST00000302731 WDR18Q9BV38 432 aa11.93□□□□□ -0.5
CLP1-201ENST00000302731 TTC12Q9H892 705 aaPredicted RBP11.93□□□□□ -0.5
CLP1-201ENST00000302731 STK24Q9Y6E0 443 aa11.93□□□□□ -0.5
CLP1-201ENST00000302731 PITPNM2Q9BZ72 1349 aa11.93□□□□□ -0.5
CLP1-201ENST00000302731 PPP1R3GB7ZBB8 358 aa11.93□□□□□ -0.5
CLP1-201ENST00000302731 FDX1P10109 184 aa11.93□□□□□ -0.5
CLP1-201ENST00000302731 ZNF18P17022 549 aa11.93□□□□□ -0.5
CLP1-201ENST00000302731 LMOD1P29536 600 aaPredicted RBP11.93□□□□□ -0.5
CLP1-201ENST00000302731 FANCCQ00597 558 aa11.93□□□□□ -0.5
CLP1-201ENST00000302731 FMR1Q06787 632 aaKnown RBP eCLIP11.93□□□□□ -0.5
CLP1-201ENST00000302731 HYIQ5T013 277 aa11.93□□□□□ -0.5
CLP1-201ENST00000302731 KRT79Q5XKE5 535 aa11.93□□□□□ -0.5
CLP1-201ENST00000302731 SAMD3Q8N6K7 520 aa11.93□□□□□ -0.5
CLP1-201ENST00000302731 PRPF38AQ8NAV1 312 aaKnown RBP11.93□□□□□ -0.5
CLP1-201ENST00000302731 KIFC2Q96AC6 838 aa11.93□□□□□ -0.5
CLP1-201ENST00000302731 C7orf25Q9BPX7 421 aa11.93□□□□□ -0.5
CLP1-201ENST00000302731 GLIS2Q9BZE0 524 aaPredicted RBP11.93□□□□□ -0.5
CLP1-201ENST00000302731 AS3MTQ9HBK9 375 aa11.93□□□□□ -0.5
CLP1-201ENST00000302731 FANCLQ9NW38 375 aa11.93□□□□□ -0.5
CLP1-201ENST00000302731 PCDHA12Q9UN75 941 aa11.93□□□□□ -0.5
CLP1-201ENST00000302731 DOCK1Q14185 1865 aa11.92□□□□□ -0.5
CLP1-201ENST00000302731 ASTN2O75129 1339 aaPredicted RBP11.92□□□□□ -0.5
CLP1-201ENST00000302731 KDM3AQ9Y4C1 1321 aa11.92□□□□□ -0.5
CLP1-201ENST00000302731 SBF1O95248 1867 aa11.92□□□□□ -0.5
CLP1-201ENST00000302731 RHOBTB3O94955 611 aa11.92□□□□□ -0.5
CLP1-201ENST00000302731 PPP1R2P41236 205 aa11.92□□□□□ -0.5
CLP1-201ENST00000302731 GSDMDP57764 484 aa11.92□□□□□ -0.5
CLP1-201ENST00000302731 SNAP25P60880 206 aa11.92□□□□□ -0.5
CLP1-201ENST00000302731 NBPF12Q5TAG4 269 aaPredicted RBP11.92□□□□□ -0.5
CLP1-201ENST00000302731 ANGEL2Q5VTE6 544 aaKnown RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms