RNA–Protein interactions for RNA: ENST00000302278.7

ITGB1-201, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ITGB1, Length 3,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-201ENST00000302278 FGRP09769 529 aa7.73□□□□□ -1.17
ITGB1-201ENST00000302278 STAT2P52630 851 aa7.73□□□□□ -1.17
ITGB1-201ENST00000302278 SIRT2Q8IXJ6 389 aa7.73□□□□□ -1.17
ITGB1-201ENST00000302278 EPB41L4AQ9HCS5 686 aaPredicted RBP7.73□□□□□ -1.17
ITGB1-201ENST00000302278 CD320Q9NPF0 282 aa7.73□□□□□ -1.17
ITGB1-201ENST00000302278 TET1Q8NFU7 2136 aa7.73□□□□□ -1.17
ITGB1-201ENST00000302278 ICAM1P05362 532 aa7.73□□□□□ -1.17
ITGB1-201ENST00000302278 CCL23P55773 120 aa7.73□□□□□ -1.17
ITGB1-201ENST00000302278 TRAF7Q6Q0C0 670 aa7.73□□□□□ -1.17
ITGB1-201ENST00000302278 RGS22Q8NE09 1264 aa7.73□□□□□ -1.17
ITGB1-201ENST00000302278 CHURC1Q8WUH1 139 aa7.73□□□□□ -1.17
ITGB1-201ENST00000302278 CEP95Q96GE4 821 aa7.73□□□□□ -1.17
ITGB1-201ENST00000302278 RNF146Q9NTX7 359 aa7.73□□□□□ -1.17
ITGB1-201ENST00000302278 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.73□□□□□ -1.17
ITGB1-201ENST00000302278 HOXD8P13378 290 aaPredicted RBP7.72□□□□□ -1.17
ITGB1-201ENST00000302278 WDR5P61964 334 aaKnown RBP7.72□□□□□ -1.17
ITGB1-201ENST00000302278 HTRA4P83105 476 aaPredicted RBP7.72□□□□□ -1.17
ITGB1-201ENST00000302278 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.72□□□□□ -1.17
ITGB1-201ENST00000302278 EMID1Q96A84 441 aaPredicted RBP7.72□□□□□ -1.17
ITGB1-201ENST00000302278 SCLYQ96I15 445 aa7.72□□□□□ -1.17
ITGB1-201ENST00000302278 ALDH5A1P51649 535 aaPredicted RBP7.72□□□□□ -1.17
ITGB1-201ENST00000302278 PSMC6P62333 389 aa7.72□□□□□ -1.17
ITGB1-201ENST00000302278 BFSP2Q13515 415 aa7.72□□□□□ -1.17
ITGB1-201ENST00000302278 CNKSR3Q6P9H4 555 aa7.72□□□□□ -1.17
ITGB1-201ENST00000302278 CCDC155Q8N6L0 562 aa7.72□□□□□ -1.17
ITGB1-201ENST00000302278 CLUAP1Q96AJ1 413 aa7.72□□□□□ -1.17
ITGB1-201ENST00000302278 SAMD11Q96NU1 681 aa7.72□□□□□ -1.17
ITGB1-201ENST00000302278 PDGFCQ9NRA1 345 aa7.72□□□□□ -1.17
ITGB1-201ENST00000302278 TRMT13Q9NUP7 481 aaKnown RBP7.72□□□□□ -1.17
ITGB1-201ENST00000302278 GRXCR2A6NFK2 248 aa7.72□□□□□ -1.17
ITGB1-201ENST00000302278 ALADP13716 330 aa7.72□□□□□ -1.17
ITGB1-201ENST00000302278 TRIM71Q2Q1W2 868 aaKnown RBP7.72□□□□□ -1.17
ITGB1-201ENST00000302278 DNERQ8NFT8 737 aa7.72□□□□□ -1.17
ITGB1-201ENST00000302278 TRERF1Q96PN7 1200 aa7.72□□□□□ -1.17
ITGB1-201ENST00000302278 UBE2ZQ9H832 354 aaPredicted RBP7.72□□□□□ -1.17
ITGB1-201ENST00000302278 MUM1L1Q5H9M0 696 aa7.71□□□□□ -1.17
ITGB1-201ENST00000302278 WDR19Q8NEZ3 1342 aa7.71□□□□□ -1.17
ITGB1-201ENST00000302278 APPBP2Q92624 585 aa7.71□□□□□ -1.17
ITGB1-201ENST00000302278 FRAT1Q92837 279 aaPredicted RBP7.71□□□□□ -1.17
ITGB1-201ENST00000302278 KIFC2Q96AC6 838 aa7.71□□□□□ -1.17
ITGB1-201ENST00000302278 ZBTB40Q9NUA8 1239 aa7.71□□□□□ -1.17
ITGB1-201ENST00000302278 CLIP2Q9UDT6 1046 aa7.71□□□□□ -1.17
ITGB1-201ENST00000302278 ANAPC4Q9UJX5 808 aa7.71□□□□□ -1.17
ITGB1-201ENST00000302278 ABHD14A-ACY1A0A1B0GW23 586 aa7.71□□□□□ -1.18
ITGB1-201ENST00000302278 ZFYP08048 801 aaPredicted RBP7.71□□□□□ -1.18
ITGB1-201ENST00000302278 IFIT2P09913 472 aaKnown RBP7.71□□□□□ -1.18
ITGB1-201ENST00000302278 HOXC8P31273 242 aa7.71□□□□□ -1.18
ITGB1-201ENST00000302278 NHLH1Q02575 133 aa7.71□□□□□ -1.18
ITGB1-201ENST00000302278 SLFNL1Q499Z3 407 aa7.71□□□□□ -1.18
ITGB1-201ENST00000302278 SLFN13Q68D06 897 aa7.71□□□□□ -1.18
ITGB1-201ENST00000302278 FBXO16Q8IX29 292 aaPredicted RBP7.71□□□□□ -1.18
ITGB1-201ENST00000302278 DCAF4Q8WV16 495 aa7.71□□□□□ -1.18
ITGB1-201ENST00000302278 DNAJC2Q99543 621 aaKnown RBP7.71□□□□□ -1.18
ITGB1-201ENST00000302278 ADD3Q9UEY8 706 aaKnown RBP7.71□□□□□ -1.18
ITGB1-201ENST00000302278 RAD50Q92878 1312 aa7.71□□□□□ -1.18
ITGB1-201ENST00000302278 KIF28PB7ZC32 967 aa7.71□□□□□ -1.18
ITGB1-201ENST00000302278 RFXAPO00287 272 aa7.71□□□□□ -1.18
ITGB1-201ENST00000302278 DYNC1LI2O43237 492 aaPredicted RBP7.71□□□□□ -1.18
ITGB1-201ENST00000302278 GHRHRQ02643 423 aa7.71□□□□□ -1.18
ITGB1-201ENST00000302278 TMEM63BQ5T3F8 832 aa7.71□□□□□ -1.18
ITGB1-201ENST00000302278 BMP8AQ7Z5Y6 402 aa7.71□□□□□ -1.18
ITGB1-201ENST00000302278 TICAM2Q86XR7 235 aa7.71□□□□□ -1.18
ITGB1-201ENST00000302278 LRRC47Q8N1G4 583 aaKnown RBP7.71□□□□□ -1.18
ITGB1-201ENST00000302278 KBTBD3Q8NAB2 608 aa7.71□□□□□ -1.18
ITGB1-201ENST00000302278 DHX38Q92620 1227 aaKnown RBP7.71□□□□□ -1.18
ITGB1-201ENST00000302278 VTI1AQ96AJ9 217 aa7.71□□□□□ -1.18
ITGB1-201ENST00000302278 IL1RAPL2Q9NP60 686 aa7.71□□□□□ -1.18
ITGB1-201ENST00000302278 ZMYM6O95789 1325 aa7.7□□□□□ -1.18
ITGB1-201ENST00000302278 GJB5O95377 273 aa7.7□□□□□ -1.18
ITGB1-201ENST00000302278 NBPF20Q3BBV1 942 aa7.7□□□□□ -1.18
ITGB1-201ENST00000302278 CCDC62Q6P9F0 684 aa7.7□□□□□ -1.18
ITGB1-201ENST00000302278 CLEC4DQ8WXI8 215 aa7.7□□□□□ -1.18
ITGB1-201ENST00000302278 TGS1Q96RS0 853 aaKnown RBP7.7□□□□□ -1.18
ITGB1-201ENST00000302278 RAD9AQ99638 391 aa7.7□□□□□ -1.18
ITGB1-201ENST00000302278 TCP11L1Q9NUJ3 509 aa7.7□□□□□ -1.18
ITGB1-201ENST00000302278 PRR12Q9ULL5 1215 aa7.7□□□□□ -1.18
ITGB1-201ENST00000302278 LINC01553A4QN01 128 aa7.7□□□□□ -1.18
ITGB1-201ENST00000302278 HAS3O00219 553 aa7.7□□□□□ -1.18
ITGB1-201ENST00000302278 MRE11P49959 708 aa7.7□□□□□ -1.18
ITGB1-201ENST00000302278 ITPRIPQ8IWB1 547 aa7.7□□□□□ -1.18
ITGB1-201ENST00000302278 CPXCR1Q8N123 301 aa7.7□□□□□ -1.18
ITGB1-201ENST00000302278 SNX27Q96L92 541 aa7.7□□□□□ -1.18
ITGB1-201ENST00000302278 SUGCTQ9HAC7 445 aa7.7□□□□□ -1.18
ITGB1-201ENST00000302278 ZNF318Q5VUA4 2279 aa7.7□□□□□ -1.18
ITGB1-201ENST00000302278 MYH7BA7E2Y1 1941 aa7.7□□□□□ -1.18
ITGB1-201ENST00000302278 MYH6P13533 1939 aa7.7□□□□□ -1.18
ITGB1-201ENST00000302278 PATL2C9JE40 543 aaKnown RBP7.7□□□□□ -1.18
ITGB1-201ENST00000302278 HMMRO75330 724 aa7.7□□□□□ -1.18
ITGB1-201ENST00000302278 CHGBP05060 677 aa7.7□□□□□ -1.18
ITGB1-201ENST00000302278 CYP2C9P11712 490 aa7.7□□□□□ -1.18
ITGB1-201ENST00000302278 TCTN1Q2MV58 587 aa7.7□□□□□ -1.18
ITGB1-201ENST00000302278 GJD3Q8N144 294 aa7.7□□□□□ -1.18
ITGB1-201ENST00000302278 OSBP2Q969R2 916 aa7.7□□□□□ -1.18
ITGB1-201ENST00000302278 WDR11Q9BZH6 1224 aa7.7□□□□□ -1.18
ITGB1-201ENST00000302278 TMEM232C9JQI7 657 aa7.69□□□□□ -1.18
ITGB1-201ENST00000302278 C5orf67F2Z3F1 127 aa7.69□□□□□ -1.18
ITGB1-201ENST00000302278 SNHG28P0DPA3 235 aa7.69□□□□□ -1.18
ITGB1-201ENST00000302278 SELPP16109 830 aa7.69□□□□□ -1.18
ITGB1-201ENST00000302278 NT5C2P49902 561 aa7.69□□□□□ -1.18
ITGB1-201ENST00000302278 KRT40Q6A162 431 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms