RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 SRGAP1Q7Z6B7 1085 aa15.2■□□□□ 0.02
CDH8-201ENST00000299345 CTAGE6Q86UF2 777 aa15.2■□□□□ 0.02
CDH8-201ENST00000299345 CTAGE4Q8IX94 777 aa15.2■□□□□ 0.02
CDH8-201ENST00000299345 ZNF622Q969S3 477 aaKnown RBP eCLIP15.2■□□□□ 0.02
CDH8-201ENST00000299345 CHP1Q99653 195 aa15.2■□□□□ 0.02
CDH8-201ENST00000299345 SWAP70Q9UH65 585 aa15.2■□□□□ 0.02
CDH8-201ENST00000299345 FANCGO15287 622 aa15.2■□□□□ 0.02
CDH8-201ENST00000299345 NDUFA10O95299 355 aa15.2■□□□□ 0.02
CDH8-201ENST00000299345 FCER1AP12319 257 aa15.2■□□□□ 0.02
CDH8-201ENST00000299345 HOXA10P31260 410 aaPredicted RBP15.2■□□□□ 0.02
CDH8-201ENST00000299345 SLC16A2P36021 539 aa15.2■□□□□ 0.02
CDH8-201ENST00000299345 MCM6Q14566 821 aa15.2■□□□□ 0.02
CDH8-201ENST00000299345 CCDC122Q5T0U0 273 aa15.2■□□□□ 0.02
CDH8-201ENST00000299345 CUL5Q93034 780 aa15.2■□□□□ 0.02
CDH8-201ENST00000299345 KIFC2Q96AC6 838 aa15.2■□□□□ 0.02
CDH8-201ENST00000299345 TSG101Q99816 390 aa15.2■□□□□ 0.02
CDH8-201ENST00000299345 GAKO14976 1311 aa15.2■□□□□ 0.02
CDH8-201ENST00000299345 LTBP4Q8N2S1 1624 aa15.2■□□□□ 0.02
CDH8-201ENST00000299345 ESYT2A0FGR8 921 aa15.2■□□□□ 0.02
CDH8-201ENST00000299345 KLRC4O43908 158 aa15.2■□□□□ 0.02
CDH8-201ENST00000299345 SEC31AO94979 1220 aaKnown RBP15.2■□□□□ 0.02
CDH8-201ENST00000299345 TDP2O95551 362 aa15.2■□□□□ 0.02
CDH8-201ENST00000299345 ORC2Q13416 577 aaPredicted RBP15.2■□□□□ 0.02
CDH8-201ENST00000299345 SLC27A3Q5K4L6 730 aa15.2■□□□□ 0.02
CDH8-201ENST00000299345 LARP4BQ92615 738 aaKnown RBP15.2■□□□□ 0.02
CDH8-201ENST00000299345 C7orf25Q9BPX7 421 aa15.2■□□□□ 0.02
CDH8-201ENST00000299345 DEF6Q9H4E7 631 aa15.2■□□□□ 0.02
CDH8-201ENST00000299345 A0A1B0GUL6 1792 aa15.19■□□□□ 0.02
CDH8-201ENST00000299345 A0A1W2PQC6 194 aa15.19■□□□□ 0.02
CDH8-201ENST00000299345 PNMA6AP0CW24 399 aaPredicted RBP15.19■□□□□ 0.02
CDH8-201ENST00000299345 DDR1Q08345 913 aa15.19■□□□□ 0.02
CDH8-201ENST00000299345 SPA17Q15506 151 aa15.19■□□□□ 0.02
CDH8-201ENST00000299345 UBE2SQ16763 222 aa15.19■□□□□ 0.02
CDH8-201ENST00000299345 ANKRD40Q6AI12 368 aa15.19■□□□□ 0.02
CDH8-201ENST00000299345 ZHX3Q9H4I2 956 aa15.19■□□□□ 0.02
CDH8-201ENST00000299345 RIOX1Q9H6W3 641 aa15.19■□□□□ 0.02
CDH8-201ENST00000299345 STK17AQ9UEE5 414 aa15.19■□□□□ 0.02
CDH8-201ENST00000299345 PNMA6FA0A0J9YX94 578 aa15.19■□□□□ 0.02
CDH8-201ENST00000299345 A0A0U1RQJ8 604 aa15.19■□□□□ 0.02
CDH8-201ENST00000299345 ERLIN1O75477 346 aa15.19■□□□□ 0.02
CDH8-201ENST00000299345 KRT18P05783 430 aaKnown RBP15.19■□□□□ 0.02
CDH8-201ENST00000299345 TTI2Q6NXR4 508 aa15.19■□□□□ 0.02
CDH8-201ENST00000299345 ATRIPQ8WXE1 791 aa15.19■□□□□ 0.02
CDH8-201ENST00000299345 HPS3Q969F9 1004 aa15.19■□□□□ 0.02
CDH8-201ENST00000299345 POTEB2H3BUK9 544 aa15.19■□□□□ 0.02
CDH8-201ENST00000299345 TCP10Q12799 353 aa15.19■□□□□ 0.02
CDH8-201ENST00000299345 GPATCH4Q5T3I0 446 aaKnown RBP15.19■□□□□ 0.02
CDH8-201ENST00000299345 KCTD1Q719H9 257 aa15.19■□□□□ 0.02
CDH8-201ENST00000299345 IRF2BP1Q8IU81 584 aa15.19■□□□□ 0.02
CDH8-201ENST00000299345 MXD3Q9BW11 206 aa15.19■□□□□ 0.02
CDH8-201ENST00000299345 PARD6BQ9BYG5 372 aa15.19■□□□□ 0.02
CDH8-201ENST00000299345 MMRN2Q9H8L6 949 aa15.19■□□□□ 0.02
CDH8-201ENST00000299345 PSTPIP2Q9H939 334 aa15.19■□□□□ 0.02
CDH8-201ENST00000299345 ZNF219Q9P2Y4 722 aaPredicted RBP15.19■□□□□ 0.02
CDH8-201ENST00000299345 ATP6V0A2Q9Y487 856 aa15.19■□□□□ 0.02
CDH8-201ENST00000299345 POTEMA6NI47 508 aa15.18■□□□□ 0.02
CDH8-201ENST00000299345 POLR3GO15318 223 aaPredicted RBP15.18■□□□□ 0.02
CDH8-201ENST00000299345 KRT86O43790 486 aa15.18■□□□□ 0.02
CDH8-201ENST00000299345 HMGB2P26583 209 aaKnown RBP15.18■□□□□ 0.02
CDH8-201ENST00000299345 UIMC1Q96RL1 719 aa15.18■□□□□ 0.02
CDH8-201ENST00000299345 ZNF446Q9NWS9 450 aa15.18■□□□□ 0.02
CDH8-201ENST00000299345 MYO1AQ9UBC5 1043 aa15.18■□□□□ 0.02
CDH8-201ENST00000299345 CCDC88AQ3V6T2 1871 aa15.18■□□□□ 0.02
CDH8-201ENST00000299345 RNF225M0QZC1 329 aaPredicted RBP15.18■□□□□ 0.02
CDH8-201ENST00000299345 ALDH1B1P30837 517 aa15.18■□□□□ 0.02
CDH8-201ENST00000299345 GPS2Q13227 327 aa15.18■□□□□ 0.02
CDH8-201ENST00000299345 HAUS4Q9H6D7 363 aa15.18■□□□□ 0.02
CDH8-201ENST00000299345 QTRT2Q9H974 415 aaKnown RBP15.18■□□□□ 0.02
CDH8-201ENST00000299345 DDX25Q9UHL0 483 aaKnown RBP15.18■□□□□ 0.02
CDH8-201ENST00000299345 SUGT1Q9Y2Z0 365 aa15.18■□□□□ 0.02
CDH8-201ENST00000299345 UTP14CQ5TAP6 766 aaKnown RBP15.18■□□□□ 0.02
CDH8-201ENST00000299345 ADGRF4Q8IZF3 695 aa15.18■□□□□ 0.02
CDH8-201ENST00000299345 CAGE1Q8TC20 777 aa15.18■□□□□ 0.02
CDH8-201ENST00000299345 CCDC42Q96M95 316 aa15.18■□□□□ 0.02
CDH8-201ENST00000299345 RHOXF2BP0C7M4 288 aa15.17■□□□□ 0.02
CDH8-201ENST00000299345 ZNF543Q08ER8 600 aa15.17■□□□□ 0.02
CDH8-201ENST00000299345 TTBK2Q6IQ55 1244 aa15.17■□□□□ 0.02
CDH8-201ENST00000299345 NLGN1Q8N2Q7 840 aa15.17■□□□□ 0.02
CDH8-201ENST00000299345 RETREG2Q8NC44 543 aa15.17■□□□□ 0.02
CDH8-201ENST00000299345 EHBP1Q8NDI1 1231 aa15.17■□□□□ 0.02
CDH8-201ENST00000299345 RHOXF2Q9BQY4 288 aa15.17■□□□□ 0.02
CDH8-201ENST00000299345 CAPN11Q9UMQ6 739 aa15.17■□□□□ 0.02
CDH8-201ENST00000299345 ERCC3P19447 782 aa15.17■□□□□ 0.02
CDH8-201ENST00000299345 SLC1A4P43007 532 aa15.17■□□□□ 0.02
CDH8-201ENST00000299345 TUBB4BP68371 445 aa15.17■□□□□ 0.02
CDH8-201ENST00000299345 PCDHA12Q9UN75 941 aa15.17■□□□□ 0.02
CDH8-201ENST00000299345 POLRMTO00411 1230 aaKnown RBP15.17■□□□□ 0.02
CDH8-201ENST00000299345 SRGNP10124 158 aa15.17■□□□□ 0.02
CDH8-201ENST00000299345 CACNA2D4Q7Z3S7 1137 aa15.17■□□□□ 0.02
CDH8-201ENST00000299345 KIAA0825Q8IV33 1275 aa15.17■□□□□ 0.02
CDH8-201ENST00000299345 SNED1Q8TER0 1413 aa15.17■□□□□ 0.02
CDH8-201ENST00000299345 UNC13DQ70J99 1090 aa15.16■□□□□ 0.02
CDH8-201ENST00000299345 JAKMIP2Q96AA8 810 aa15.16■□□□□ 0.02
CDH8-201ENST00000299345 CCDC17Q96LX7 622 aa15.16■□□□□ 0.02
CDH8-201ENST00000299345 JMJD4Q9H9V9 463 aa15.16■□□□□ 0.02
CDH8-201ENST00000299345 DDX4Q9NQI0 724 aaKnown RBP15.16■□□□□ 0.02
CDH8-201ENST00000299345 USP17L10C9JJH3 530 aa15.16■□□□□ 0.02
CDH8-201ENST00000299345 SLC37A4O43826 429 aa15.16■□□□□ 0.02
CDH8-201ENST00000299345 NPR1P16066 1061 aa15.16■□□□□ 0.02
CDH8-201ENST00000299345 ZBED6P86452 979 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms