RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 HEATR3Q7Z4Q2 680 aa17.4■□□□□ 0.38
UBAP1-201ENST00000297661 BLIDQ8IZY5 108 aa17.4■□□□□ 0.38
UBAP1-201ENST00000297661 PNMA1Q8ND90 353 aa17.4■□□□□ 0.38
UBAP1-201ENST00000297661 FAM76AQ8TAV0 307 aa17.4■□□□□ 0.38
UBAP1-201ENST00000297661 COPB1P53618 953 aaKnown RBP17.39■□□□□ 0.37
UBAP1-201ENST00000297661 USP14P54578 494 aa17.39■□□□□ 0.37
UBAP1-201ENST00000297661 SH3RF3Q8TEJ3 882 aaPredicted RBP17.39■□□□□ 0.37
UBAP1-201ENST00000297661 NLRP3Q96P20 1036 aa17.39■□□□□ 0.37
UBAP1-201ENST00000297661 SLF1Q9BQI6 1058 aa17.39■□□□□ 0.37
UBAP1-201ENST00000297661 RABEP2Q9H5N1 569 aa17.39■□□□□ 0.37
UBAP1-201ENST00000297661 POLD1P28340 1107 aa17.39■□□□□ 0.37
UBAP1-201ENST00000297661 SLC16A10Q8TF71 515 aa17.39■□□□□ 0.37
UBAP1-201ENST00000297661 CTAGE1Q96RT6 745 aa17.39■□□□□ 0.37
UBAP1-201ENST00000297661 TRIM10Q9UDY6 481 aa17.39■□□□□ 0.37
UBAP1-201ENST00000297661 STX8Q9UNK0 236 aa17.39■□□□□ 0.37
UBAP1-201ENST00000297661 A0A1B0GUL6 1792 aa17.39■□□□□ 0.37
UBAP1-201ENST00000297661 MYH8P13535 1937 aa17.38■□□□□ 0.37
UBAP1-201ENST00000297661 GTPBP6O43824 516 aaPredicted RBP17.38■□□□□ 0.37
UBAP1-201ENST00000297661 CHRNA5P30532 468 aa17.38■□□□□ 0.37
UBAP1-201ENST00000297661 TCP11X2Q5H9J9 407 aa17.38■□□□□ 0.37
UBAP1-201ENST00000297661 TPTE2Q6XPS3 522 aa17.38■□□□□ 0.37
UBAP1-201ENST00000297661 C4orf32Q8N8J7 132 aa17.38■□□□□ 0.37
UBAP1-201ENST00000297661 CHP1Q99653 195 aa17.38■□□□□ 0.37
UBAP1-201ENST00000297661 EHD4Q9H223 541 aa17.38■□□□□ 0.37
UBAP1-201ENST00000297661 ATP8A2Q9NTI2 1148 aa17.38■□□□□ 0.37
UBAP1-201ENST00000297661 SUFUQ9UMX1 484 aa17.38■□□□□ 0.37
UBAP1-201ENST00000297661 INPP5BP32019 993 aa17.38■□□□□ 0.37
UBAP1-201ENST00000297661 ARHGAP25P42331 645 aa17.38■□□□□ 0.37
UBAP1-201ENST00000297661 UBXN1Q04323 297 aa17.38■□□□□ 0.37
UBAP1-201ENST00000297661 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.38■□□□□ 0.37
UBAP1-201ENST00000297661 SGIP1Q9BQI5 828 aa17.38■□□□□ 0.37
UBAP1-201ENST00000297661 CRACR2AQ9BSW2 395 aa17.38■□□□□ 0.37
UBAP1-201ENST00000297661 MKNK2Q9HBH9 465 aa17.38■□□□□ 0.37
UBAP1-201ENST00000297661 ABHD10Q9NUJ1 306 aa17.38■□□□□ 0.37
UBAP1-201ENST00000297661 ARPP21Q9UBL0 812 aaPredicted RBP17.38■□□□□ 0.37
UBAP1-201ENST00000297661 BCAS4Q8TDM0 211 aa17.37■□□□□ 0.37
UBAP1-201ENST00000297661 LRRC15Q8TF66 581 aa17.37■□□□□ 0.37
UBAP1-201ENST00000297661 RWDD2AQ9UIY3 292 aa17.37■□□□□ 0.37
UBAP1-201ENST00000297661 GOLGA6CA6NDK9 693 aa17.37■□□□□ 0.37
UBAP1-201ENST00000297661 CYTH3O43739 400 aa17.37■□□□□ 0.37
UBAP1-201ENST00000297661 GOLGA6DP0CG33 693 aa17.37■□□□□ 0.37
UBAP1-201ENST00000297661 MCM3P25205 808 aa17.37■□□□□ 0.37
UBAP1-201ENST00000297661 KRT9P35527 623 aa17.37■□□□□ 0.37
UBAP1-201ENST00000297661 POTEDQ86YR6 584 aa17.37■□□□□ 0.37
UBAP1-201ENST00000297661 CNGA4Q8IV77 575 aa17.37■□□□□ 0.37
UBAP1-201ENST00000297661 TGFBRAP1Q8WUH2 860 aa17.37■□□□□ 0.37
UBAP1-201ENST00000297661 GOLGA6AQ9NYA3 693 aa17.37■□□□□ 0.37
UBAP1-201ENST00000297661 ANKIB1Q9P2G1 1089 aa17.37■□□□□ 0.37
UBAP1-201ENST00000297661 MYO1AQ9UBC5 1043 aa17.37■□□□□ 0.37
UBAP1-201ENST00000297661 CCDC194A0A1B0GVG4 234 aa17.36■□□□□ 0.37
UBAP1-201ENST00000297661 AGPSO00116 658 aa17.36■□□□□ 0.37
UBAP1-201ENST00000297661 KIF5BP33176 963 aa17.36■□□□□ 0.37
UBAP1-201ENST00000297661 NAALADL2Q58DX5 795 aa17.36■□□□□ 0.37
UBAP1-201ENST00000297661 ZNF658Q5TYW1 1059 aaPredicted RBP17.36■□□□□ 0.37
UBAP1-201ENST00000297661 MAPKAPK5Q8IW41 473 aa17.36■□□□□ 0.37
UBAP1-201ENST00000297661 LIMA1Q9UHB6 759 aaKnown RBP17.36■□□□□ 0.37
UBAP1-201ENST00000297661 ZMYND10O75800 440 aa17.36■□□□□ 0.37
UBAP1-201ENST00000297661 PCP11498 1178 aaKnown RBP17.36■□□□□ 0.37
UBAP1-201ENST00000297661 IRF2BP1Q8IU81 584 aa17.36■□□□□ 0.37
UBAP1-201ENST00000297661 ZNF219Q9P2Y4 722 aaPredicted RBP17.36■□□□□ 0.37
UBAP1-201ENST00000297661 PCDHA4Q9UN74 947 aa17.36■□□□□ 0.37
UBAP1-201ENST00000297661 QSER1Q2KHR3 1735 aa17.36■□□□□ 0.37
UBAP1-201ENST00000297661 SHTN1A0MZ66 631 aa17.35■□□□□ 0.37
UBAP1-201ENST00000297661 KIF1CO43896 1103 aaKnown RBP17.35■□□□□ 0.37
UBAP1-201ENST00000297661 GSPT2Q8IYD1 628 aaKnown RBP17.35■□□□□ 0.37
UBAP1-201ENST00000297661 CNPY4Q8N129 248 aa17.35■□□□□ 0.37
UBAP1-201ENST00000297661 NLGN2Q8NFZ4 835 aa17.35■□□□□ 0.37
UBAP1-201ENST00000297661 DISC1Q9NRI5 854 aa17.35■□□□□ 0.37
UBAP1-201ENST00000297661 MAD2L2Q9UI95 211 aa17.35■□□□□ 0.37
UBAP1-201ENST00000297661 PCDHA6Q9UN73 950 aa17.35■□□□□ 0.37
UBAP1-201ENST00000297661 PCDHA8Q9Y5H6 950 aa17.35■□□□□ 0.37
UBAP1-201ENST00000297661 LAMB2P55268 1798 aa17.35■□□□□ 0.37
UBAP1-201ENST00000297661 TSPY3P0CV98 308 aa17.35■□□□□ 0.37
UBAP1-201ENST00000297661 TSPY8P0CW00 308 aa17.35■□□□□ 0.37
UBAP1-201ENST00000297661 DTHD1Q6ZMT9 781 aa17.35■□□□□ 0.37
UBAP1-201ENST00000297661 GPIHBP1Q8IV16 184 aa17.35■□□□□ 0.37
UBAP1-201ENST00000297661 CAPS2Q9BXY5 557 aa17.35■□□□□ 0.37
UBAP1-201ENST00000297661 VAT1LQ9HCJ6 419 aa17.35■□□□□ 0.37
UBAP1-201ENST00000297661 PARP1P09874 1014 aaKnown RBP17.34■□□□□ 0.37
UBAP1-201ENST00000297661 TRAPPC10P48553 1259 aa17.34■□□□□ 0.37
UBAP1-201ENST00000297661 PPFIA1Q13136 1202 aa17.34■□□□□ 0.37
UBAP1-201ENST00000297661 C12orf60Q5U649 245 aa17.34■□□□□ 0.37
UBAP1-201ENST00000297661 TMTC1Q8IUR5 882 aa17.34■□□□□ 0.37
UBAP1-201ENST00000297661 MMS19Q96T76 1030 aa17.34■□□□□ 0.37
UBAP1-201ENST00000297661 FHDC1Q9C0D6 1143 aaPredicted RBP17.34■□□□□ 0.37
UBAP1-201ENST00000297661 HDAC6Q9UBN7 1215 aa17.34■□□□□ 0.37
UBAP1-201ENST00000297661 ENC1O14682 589 aa17.34■□□□□ 0.37
UBAP1-201ENST00000297661 SEMA3EO15041 775 aa17.34■□□□□ 0.37
UBAP1-201ENST00000297661 TRAPPC11Q7Z392 1133 aa17.34■□□□□ 0.37
UBAP1-201ENST00000297661 PRPF38AQ8NAV1 312 aaKnown RBP17.34■□□□□ 0.37
UBAP1-201ENST00000297661 HPS3Q969F9 1004 aa17.34■□□□□ 0.37
UBAP1-201ENST00000297661 ZNF622Q969S3 477 aaKnown RBP eCLIP17.34■□□□□ 0.37
UBAP1-201ENST00000297661 SELENOOQ9BVL4 669 aa17.34■□□□□ 0.37
UBAP1-201ENST00000297661 TTC26A0AVF1 554 aa17.34■□□□□ 0.37
UBAP1-201ENST00000297661 EIF3HO15372 352 aaKnown RBP eCLIP17.34■□□□□ 0.37
UBAP1-201ENST00000297661 LDHBP07195 334 aaKnown RBP17.34■□□□□ 0.37
UBAP1-201ENST00000297661 MYBL2P10244 700 aa17.34■□□□□ 0.37
UBAP1-201ENST00000297661 FECHP22830 423 aa17.34■□□□□ 0.37
UBAP1-201ENST00000297661 CALML3P27482 149 aa17.34■□□□□ 0.37
UBAP1-201ENST00000297661 UBA7P41226 1012 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms