RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 NACAP1Q9BZK3 213 aa16.48■□□□□ 0.23
SPIDR-201ENST00000297423 KRT2P35908 639 aa16.48■□□□□ 0.23
SPIDR-201ENST00000297423 RASSF7Q02833 373 aa16.48■□□□□ 0.23
SPIDR-201ENST00000297423 PRPF4BQ13523 1007 aaKnown RBP16.48■□□□□ 0.23
SPIDR-201ENST00000297423 TRAPPC11Q7Z392 1133 aa16.48■□□□□ 0.23
SPIDR-201ENST00000297423 CCDC24Q8N4L8 307 aa16.48■□□□□ 0.23
SPIDR-201ENST00000297423 LPIN2Q92539 896 aa16.48■□□□□ 0.23
SPIDR-201ENST00000297423 A0A087X0B3 334 aa16.48■□□□□ 0.23
SPIDR-201ENST00000297423 ACTN4O43707 911 aaKnown RBP16.48■□□□□ 0.23
SPIDR-201ENST00000297423 NTSR2O95665 410 aa16.48■□□□□ 0.23
SPIDR-201ENST00000297423 FTCDO95954 541 aa16.48■□□□□ 0.23
SPIDR-201ENST00000297423 PLEKP08567 350 aaPredicted RBP16.48■□□□□ 0.23
SPIDR-201ENST00000297423 TMOD1P28289 359 aa16.48■□□□□ 0.23
SPIDR-201ENST00000297423 DPYDQ12882 1025 aa16.48■□□□□ 0.23
SPIDR-201ENST00000297423 RRAGAQ7L523 313 aa16.48■□□□□ 0.23
SPIDR-201ENST00000297423 ZHX3Q9H4I2 956 aa16.48■□□□□ 0.23
SPIDR-201ENST00000297423 VIPAS39Q9H9C1 493 aa16.48■□□□□ 0.23
SPIDR-201ENST00000297423 SRPRBQ9Y5M8 271 aaKnown RBP16.48■□□□□ 0.23
SPIDR-201ENST00000297423 RAD21O60216 631 aa16.47■□□□□ 0.23
SPIDR-201ENST00000297423 LSP1P33241 339 aa16.47■□□□□ 0.23
SPIDR-201ENST00000297423 TTC38Q5R3I4 469 aa16.47■□□□□ 0.23
SPIDR-201ENST00000297423 TBC1D9BQ66K14 1250 aa16.47■□□□□ 0.23
SPIDR-201ENST00000297423 UIMC1Q96RL1 719 aa16.47■□□□□ 0.23
SPIDR-201ENST00000297423 CCT8L2Q96SF2 557 aa16.47■□□□□ 0.23
SPIDR-201ENST00000297423 AGXT2Q9BYV1 514 aa16.47■□□□□ 0.23
SPIDR-201ENST00000297423 DEXIO95424 95 aa16.47■□□□□ 0.23
SPIDR-201ENST00000297423 CALRP27797 417 aaKnown RBP16.47■□□□□ 0.23
SPIDR-201ENST00000297423 CARSP49589 748 aaKnown RBP16.47■□□□□ 0.23
SPIDR-201ENST00000297423 SPATA4Q8NEY3 305 aa16.47■□□□□ 0.23
SPIDR-201ENST00000297423 HMGB2P26583 209 aaKnown RBP16.47■□□□□ 0.23
SPIDR-201ENST00000297423 ASIC1P78348 528 aa16.47■□□□□ 0.23
SPIDR-201ENST00000297423 NAA35Q5VZE5 725 aa16.47■□□□□ 0.23
SPIDR-201ENST00000297423 ZNF772Q68DY9 489 aaPredicted RBP16.47■□□□□ 0.23
SPIDR-201ENST00000297423 ZNF473Q8WTR7 871 aaKnown RBP16.47■□□□□ 0.23
SPIDR-201ENST00000297423 ARHGEF1Q92888 912 aaKnown RBP16.47■□□□□ 0.23
SPIDR-201ENST00000297423 ZNF622Q969S3 477 aaKnown RBP eCLIP16.47■□□□□ 0.232e-7■□□□□ 8.8
SPIDR-201ENST00000297423 AGPSO00116 658 aa16.46■□□□□ 0.23
SPIDR-201ENST00000297423 PRCPP42785 496 aa16.46■□□□□ 0.23
SPIDR-201ENST00000297423 EPHB4P54760 987 aa16.46■□□□□ 0.23
SPIDR-201ENST00000297423 IFT20Q8IY31 132 aa16.46■□□□□ 0.23
SPIDR-201ENST00000297423 GGT7Q9UJ14 662 aa16.46■□□□□ 0.23
SPIDR-201ENST00000297423 MARCH6O60337 910 aa16.46■□□□□ 0.23
SPIDR-201ENST00000297423 NLRP14Q86W24 1093 aa16.46■□□□□ 0.23
SPIDR-201ENST00000297423 TMEM87BQ96K49 555 aa16.46■□□□□ 0.23
SPIDR-201ENST00000297423 TRIM14Q14142 442 aa16.46■□□□□ 0.23
SPIDR-201ENST00000297423 CNPY4Q8N129 248 aa16.46■□□□□ 0.23
SPIDR-201ENST00000297423 GSDMAQ96QA5 445 aa16.46■□□□□ 0.23
SPIDR-201ENST00000297423 SLC40A1Q9NP59 571 aa16.46■□□□□ 0.23
SPIDR-201ENST00000297423 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.46■□□□□ 0.23
SPIDR-201ENST00000297423 STIM2Q9P246 746 aa16.46■□□□□ 0.23
SPIDR-201ENST00000297423 PSEN1P49768 467 aa16.45■□□□□ 0.22
SPIDR-201ENST00000297423 RASGRP4Q8TDF6 673 aa16.45■□□□□ 0.22
SPIDR-201ENST00000297423 ZKSCAN4Q969J2 545 aaPredicted RBP16.45■□□□□ 0.22
SPIDR-201ENST00000297423 RSRC1Q96IZ7 334 aaKnown RBP16.45■□□□□ 0.22
SPIDR-201ENST00000297423 RPGRIP1Q96KN7 1286 aa16.45■□□□□ 0.22
SPIDR-201ENST00000297423 RCCD1A6NED2 376 aa16.45■□□□□ 0.22
SPIDR-201ENST00000297423 CLSTN1O94985 981 aa16.45■□□□□ 0.22
SPIDR-201ENST00000297423 RPN1P04843 607 aaKnown RBP16.45■□□□□ 0.22
SPIDR-201ENST00000297423 MYBL1P10243 752 aa16.45■□□□□ 0.22
SPIDR-201ENST00000297423 MDM2Q00987 491 aaPredicted RBP16.45■□□□□ 0.22
SPIDR-201ENST00000297423 EHHADHQ08426 723 aa16.45■□□□□ 0.22
SPIDR-201ENST00000297423 CCDC13Q8IYE1 715 aa16.45■□□□□ 0.22
SPIDR-201ENST00000297423 TUBGCP2Q9BSJ2 902 aa16.45■□□□□ 0.22
SPIDR-201ENST00000297423 EPS15P42566 896 aa16.45■□□□□ 0.22
SPIDR-201ENST00000297423 HERVK_113P62684 666 aa16.45■□□□□ 0.22
SPIDR-201ENST00000297423 MB21D1Q8N884 522 aa16.45■□□□□ 0.22
SPIDR-201ENST00000297423 STK38LQ9Y2H1 464 aa16.45■□□□□ 0.22
SPIDR-201ENST00000297423 PPP1R3GB7ZBB8 358 aa16.45■□□□□ 0.22
SPIDR-201ENST00000297423 TTMPQ5BVD1 217 aa16.45■□□□□ 0.22
SPIDR-201ENST00000297423 ADAT2Q7Z6V5 191 aaKnown RBP16.45■□□□□ 0.22
SPIDR-201ENST00000297423 ENO4A6NNW6 628 aa16.44■□□□□ 0.22
SPIDR-201ENST00000297423 GCOM1H8Y6P7 765 aaPredicted RBP16.44■□□□□ 0.22
SPIDR-201ENST00000297423 MYZAPP0CAP1 466 aa16.44■□□□□ 0.22
SPIDR-201ENST00000297423 CTNNA1P35221 906 aaKnown RBP16.44■□□□□ 0.22
SPIDR-201ENST00000297423 MYO1EQ12965 1108 aa16.44■□□□□ 0.22
SPIDR-201ENST00000297423 SWT1Q5T5J6 900 aaKnown RBP16.44■□□□□ 0.22
SPIDR-201ENST00000297423 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.44■□□□□ 0.22
SPIDR-201ENST00000297423 DYDC1Q8WWB3 177 aa16.44■□□□□ 0.22
SPIDR-201ENST00000297423 PP2D1A8MPX8 630 aa16.44■□□□□ 0.22
SPIDR-201ENST00000297423 FAM133BQ5BKY9 247 aaKnown RBP16.44■□□□□ 0.22
SPIDR-201ENST00000297423 ZNF654Q8IZM8 581 aa16.44■□□□□ 0.22
SPIDR-201ENST00000297423 REXO2Q9Y3B8 237 aaKnown RBP16.44■□□□□ 0.22
SPIDR-201ENST00000297423 CAPN6Q9Y6Q1 641 aa16.44■□□□□ 0.22
SPIDR-201ENST00000297423 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.44■□□□□ 0.22
SPIDR-201ENST00000297423 FMNL1O95466 1100 aaPredicted RBP16.44■□□□□ 0.22
SPIDR-201ENST00000297423 VIMP08670 466 aaKnown RBP16.44■□□□□ 0.22
SPIDR-201ENST00000297423 KRT71Q3SY84 523 aa16.44■□□□□ 0.22
SPIDR-201ENST00000297423 CAVIN4Q5BKX8 364 aa16.44■□□□□ 0.22
SPIDR-201ENST00000297423 TBC1D1Q86TI0 1168 aaPredicted RBP16.44■□□□□ 0.22
SPIDR-201ENST00000297423 FANCBQ8NB91 859 aa16.44■□□□□ 0.22
SPIDR-201ENST00000297423 TRIM58Q8NG06 486 aa16.44■□□□□ 0.22
SPIDR-201ENST00000297423 TRIM6Q9C030 488 aaPredicted RBP16.44■□□□□ 0.22
SPIDR-201ENST00000297423 RBM12Q9NTZ6 932 aaKnown RBP16.44■□□□□ 0.22
SPIDR-201ENST00000297423 FAM153BP0C7A2 387 aa16.43■□□□□ 0.22
SPIDR-201ENST00000297423 EIF4A3P38919 411 aaKnown RBP16.43■□□□□ 0.22
SPIDR-201ENST00000297423 PHKA1P46020 1223 aa16.43■□□□□ 0.22
SPIDR-201ENST00000297423 AARSP49588 968 aaKnown RBP eCLIP16.43■□□□□ 0.22
SPIDR-201ENST00000297423 PDE4DQ08499 809 aa16.43■□□□□ 0.22
SPIDR-201ENST00000297423 PAK2Q13177 524 aa16.43■□□□□ 0.22
SPIDR-201ENST00000297423 FAM153CQ494X1 144 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms