RNA–Protein interactions for RNA: ENST00000296861.2

TNFRSF21-201, Transcript of TNF receptor superfamily member 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF21, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF21-201ENST00000296861 PLA2G12BQ9BX93 195 aa14.78□□□□□ -0.04
TNFRSF21-201ENST00000296861 EPB41L5Q9HCM4 733 aa14.78□□□□□ -0.04
TNFRSF21-201ENST00000296861 LIMA1Q9UHB6 759 aaKnown RBP14.78□□□□□ -0.04
TNFRSF21-201ENST00000296861 LDHBP07195 334 aaKnown RBP14.78□□□□□ -0.04
TNFRSF21-201ENST00000296861 DCAF17Q5H9S7 520 aaPredicted RBP14.78□□□□□ -0.04
TNFRSF21-201ENST00000296861 SV2BQ7L1I2 683 aa14.78□□□□□ -0.04
TNFRSF21-201ENST00000296861 UHMK1Q8TAS1 419 aaKnown RBP14.78□□□□□ -0.04
TNFRSF21-201ENST00000296861 CCDC43Q96MW1 224 aaKnown RBP14.78□□□□□ -0.04
TNFRSF21-201ENST00000296861 SPAG5Q96R06 1193 aa14.78□□□□□ -0.04
TNFRSF21-201ENST00000296861 KRT12Q99456 494 aa14.78□□□□□ -0.04
TNFRSF21-201ENST00000296861 CAPS2Q9BXY5 557 aa14.78□□□□□ -0.04
TNFRSF21-201ENST00000296861 CNTNAP5Q8WYK1 1306 aa14.77□□□□□ -0.04
TNFRSF21-201ENST00000296861 MAP2K7O14733 419 aa14.77□□□□□ -0.04
TNFRSF21-201ENST00000296861 MCM3P25205 808 aa14.77□□□□□ -0.04
TNFRSF21-201ENST00000296861 KIF11P52732 1056 aa14.77□□□□□ -0.04
TNFRSF21-201ENST00000296861 FAM237AA0A1B0GTK4 181 aa14.77□□□□□ -0.05
TNFRSF21-201ENST00000296861 GOLGA6L10A6NI86 522 aa14.77□□□□□ -0.05
TNFRSF21-201ENST00000296861 IL6STP40189 918 aaPredicted RBP14.77□□□□□ -0.05
TNFRSF21-201ENST00000296861 VAV2P52735 878 aa14.77□□□□□ -0.05
TNFRSF21-201ENST00000296861 RPS8P62241 208 aaKnown RBP14.77□□□□□ -0.05
TNFRSF21-201ENST00000296861 ADSSL1Q8N142 457 aa14.77□□□□□ -0.05
TNFRSF21-201ENST00000296861 PIGSQ96S52 555 aa14.77□□□□□ -0.05
TNFRSF21-201ENST00000296861 PCDHA4Q9UN74 947 aa14.77□□□□□ -0.05
TNFRSF21-201ENST00000296861 MINPP1Q9UNW1 487 aa14.77□□□□□ -0.05
TNFRSF21-201ENST00000296861 TLDC2A0PJX2 215 aa14.77□□□□□ -0.05
TNFRSF21-201ENST00000296861 LRRC53A6NM62 1247 aa14.77□□□□□ -0.05
TNFRSF21-201ENST00000296861 LONP1P36776 959 aaKnown RBP14.77□□□□□ -0.05
TNFRSF21-201ENST00000296861 AMPD3Q01432 767 aa14.77□□□□□ -0.05
TNFRSF21-201ENST00000296861 NONOQ15233 471 aaKnown RBP eCLIP14.77□□□□□ -0.05
TNFRSF21-201ENST00000296861 PFKFB3Q16875 520 aaPredicted RBP14.77□□□□□ -0.05
TNFRSF21-201ENST00000296861 FBXW10Q5XX13 1052 aa14.77□□□□□ -0.05
TNFRSF21-201ENST00000296861 PDXDC2PQ6P474 469 aa14.77□□□□□ -0.05
TNFRSF21-201ENST00000296861 TAX1BP1Q86VP1 789 aa14.77□□□□□ -0.05
TNFRSF21-201ENST00000296861 FAM114A1Q8IWE2 563 aa14.77□□□□□ -0.05
TNFRSF21-201ENST00000296861 BICDL2A1A5D9 508 aa14.76□□□□□ -0.05
TNFRSF21-201ENST00000296861 SLC16A2P36021 539 aa14.76□□□□□ -0.05
TNFRSF21-201ENST00000296861 MED4Q9NPJ6 270 aa14.76□□□□□ -0.05
TNFRSF21-201ENST00000296861 ADAMTS1Q9UHI8 967 aa14.76□□□□□ -0.05
TNFRSF21-201ENST00000296861 HPCAL4Q9UM19 191 aa14.76□□□□□ -0.05
TNFRSF21-201ENST00000296861 JRKLQ9Y4A0 524 aa14.76□□□□□ -0.05
TNFRSF21-201ENST00000296861 CDHR2Q9BYE9 1310 aa14.76□□□□□ -0.05
TNFRSF21-201ENST00000296861 KIF1AQ12756 1690 aa14.76□□□□□ -0.05
TNFRSF21-201ENST00000296861 C6orf229H3BNL8 230 aa14.76□□□□□ -0.05
TNFRSF21-201ENST00000296861 OR52Z1P0C646 297 aa14.76□□□□□ -0.05
TNFRSF21-201ENST00000296861 UBE2SQ16763 222 aa14.76□□□□□ -0.05
TNFRSF21-201ENST00000296861 POTEDQ86YR6 584 aa14.76□□□□□ -0.05
TNFRSF21-201ENST00000296861 GLIS3Q8NEA6 775 aa14.76□□□□□ -0.05
TNFRSF21-201ENST00000296861 SH3RF3Q8TEJ3 882 aaPredicted RBP14.76□□□□□ -0.05
TNFRSF21-201ENST00000296861 MKRN1Q9UHC7 482 aaKnown RBP14.76□□□□□ -0.05
TNFRSF21-201ENST00000296861 PCDHA13Q9Y5I0 950 aa14.76□□□□□ -0.05
TNFRSF21-201ENST00000296861 EP400Q96L91 3159 aa14.76□□□□□ -0.05
TNFRSF21-201ENST00000296861 RIMBP2O15034 1052 aa14.75□□□□□ -0.05
TNFRSF21-201ENST00000296861 EPHB6O15197 1021 aa14.75□□□□□ -0.05
TNFRSF21-201ENST00000296861 SETDB2Q96T68 719 aa14.75□□□□□ -0.05
TNFRSF21-201ENST00000296861 TSG101Q99816 390 aa14.75□□□□□ -0.05
TNFRSF21-201ENST00000296861 C6orf50Q9HD87 102 aa14.75□□□□□ -0.05
TNFRSF21-201ENST00000296861 BMP2KQ9NSY1 1161 aaPredicted RBP14.75□□□□□ -0.05
TNFRSF21-201ENST00000296861 ZNF219Q9P2Y4 722 aaPredicted RBP14.75□□□□□ -0.05
TNFRSF21-201ENST00000296861 HYOU1Q9Y4L1 999 aa14.75□□□□□ -0.05
TNFRSF21-201ENST00000296861 CAPN7Q9Y6W3 813 aa14.75□□□□□ -0.05
TNFRSF21-201ENST00000296861 CEP104O60308 925 aa14.75□□□□□ -0.05
TNFRSF21-201ENST00000296861 PLS1Q14651 629 aa14.75□□□□□ -0.05
TNFRSF21-201ENST00000296861 TMEM266Q2M3C6 531 aa14.75□□□□□ -0.05
TNFRSF21-201ENST00000296861 WDR59Q6PJI9 974 aa14.75□□□□□ -0.05
TNFRSF21-201ENST00000296861 IRF2BP1Q8IU81 584 aa14.75□□□□□ -0.05
TNFRSF21-201ENST00000296861 OTUD6BQ8N6M0 293 aa14.75□□□□□ -0.05
TNFRSF21-201ENST00000296861 MSANTD4Q8NCY6 345 aa14.75□□□□□ -0.05
TNFRSF21-201ENST00000296861 PPM1EQ8WY54 764 aa14.75□□□□□ -0.05
TNFRSF21-201ENST00000296861 ERLIN2O94905 339 aa14.75□□□□□ -0.05
TNFRSF21-201ENST00000296861 HERC4Q5GLZ8 1057 aaPredicted RBP14.75□□□□□ -0.05
TNFRSF21-201ENST00000296861 KRT79Q5XKE5 535 aa14.75□□□□□ -0.05
TNFRSF21-201ENST00000296861 ZSCAN29Q8IWY8 852 aaPredicted RBP14.75□□□□□ -0.05
TNFRSF21-201ENST00000296861 ARL8AQ96BM9 186 aa14.75□□□□□ -0.05
TNFRSF21-201ENST00000296861 RIOK1Q9BRS2 568 aaKnown RBP14.75□□□□□ -0.05
TNFRSF21-201ENST00000296861 LSM14BQ9BX40 385 aaKnown RBP14.75□□□□□ -0.05
TNFRSF21-201ENST00000296861 BCS1LQ9Y276 419 aa14.75□□□□□ -0.05
TNFRSF21-201ENST00000296861 LMO7Q8WWI1 1683 aa14.75□□□□□ -0.05
TNFRSF21-201ENST00000296861 UBAP1LF5GYI3 381 aa14.74□□□□□ -0.05
TNFRSF21-201ENST00000296861 DDAH1O94760 285 aa14.74□□□□□ -0.05
TNFRSF21-201ENST00000296861 HEXIM1O94992 359 aaKnown RBP14.74□□□□□ -0.05
TNFRSF21-201ENST00000296861 SLC1A4P43007 532 aa14.74□□□□□ -0.05
TNFRSF21-201ENST00000296861 ZBED6P86452 979 aa14.74□□□□□ -0.05
TNFRSF21-201ENST00000296861 NKX1-1Q15270 411 aaPredicted RBP14.74□□□□□ -0.05
TNFRSF21-201ENST00000296861 CALCRLQ16602 461 aa14.74□□□□□ -0.05
TNFRSF21-201ENST00000296861 UBLCP1Q8WVY7 318 aaPredicted RBP14.74□□□□□ -0.05
TNFRSF21-201ENST00000296861 TBC1D5Q92609 795 aa14.74□□□□□ -0.05
TNFRSF21-201ENST00000296861 PYM1Q9BRP8 204 aaKnown RBP14.74□□□□□ -0.05
TNFRSF21-201ENST00000296861 AP1M1Q9BXS5 423 aa14.74□□□□□ -0.05
TNFRSF21-201ENST00000296861 NDST4Q9H3R1 872 aa14.74□□□□□ -0.05
TNFRSF21-201ENST00000296861 KCNK3O14649 394 aa14.74□□□□□ -0.05
TNFRSF21-201ENST00000296861 INPP5BP32019 993 aa14.74□□□□□ -0.05
TNFRSF21-201ENST00000296861 MAGEA9P43362 315 aa14.74□□□□□ -0.05
TNFRSF21-201ENST00000296861 SETQ01105 290 aaPredicted RBP14.74□□□□□ -0.05
TNFRSF21-201ENST00000296861 GUCY1A3Q02108 690 aa14.74□□□□□ -0.05
TNFRSF21-201ENST00000296861 KIAA0753Q2KHM9 967 aa14.74□□□□□ -0.05
TNFRSF21-201ENST00000296861 CEP85LQ5SZL2 805 aa14.74□□□□□ -0.05
TNFRSF21-201ENST00000296861 ZNF34Q8IZ26 560 aa14.74□□□□□ -0.05
TNFRSF21-201ENST00000296861 SPATA4Q8NEY3 305 aa14.74□□□□□ -0.05
TNFRSF21-201ENST00000296861 PSD3Q9NYI0 1048 aa14.74□□□□□ -0.05
TNFRSF21-201ENST00000296861 KDM3BQ7LBC6 1761 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms