RNA–Protein interactions for RNA: ENST00000296273.6

RFC4-201, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC4, Length 1,384 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-201ENST00000296273 TAPT1Q6NXT6 567 aa12.47□□□□□ -0.41
RFC4-201ENST00000296273 MORC4Q8TE76 937 aa12.47□□□□□ -0.41
RFC4-201ENST00000296273 POLR3EQ9NVU0 708 aa12.47□□□□□ -0.41
RFC4-201ENST00000296273 CYP39A1Q9NYL5 469 aa12.47□□□□□ -0.41
RFC4-201ENST00000296273 ADD3Q9UEY8 706 aaKnown RBP12.47□□□□□ -0.41
RFC4-201ENST00000296273 YBX2Q9Y2T7 364 aaKnown RBP12.47□□□□□ -0.41
RFC4-201ENST00000296273 MCM3APO60318 1980 aa12.47□□□□□ -0.41
RFC4-201ENST00000296273 MCCP23508 829 aa12.46□□□□□ -0.41
RFC4-201ENST00000296273 DUSP28Q4G0W2 176 aa12.46□□□□□ -0.41
RFC4-201ENST00000296273 ANKRD45Q5TZF3 282 aa12.46□□□□□ -0.41
RFC4-201ENST00000296273 KIAA1211Q6ZU35 1233 aa12.46□□□□□ -0.41
RFC4-201ENST00000296273 TRPV6Q9H1D0 765 aa12.46□□□□□ -0.41
RFC4-201ENST00000296273 WNT8AQ9H1J5 351 aa12.46□□□□□ -0.41
RFC4-201ENST00000296273 ALDH8A1Q9H2A2 487 aaPredicted RBP12.46□□□□□ -0.41
RFC4-201ENST00000296273 STX8Q9UNK0 236 aa12.46□□□□□ -0.41
RFC4-201ENST00000296273 LRRC37A2A6NM11 1700 aa12.46□□□□□ -0.41
RFC4-201ENST00000296273 TTC41PQ6P2S7 1318 aa12.46□□□□□ -0.42
RFC4-201ENST00000296273 TSPY2A6NKD2 308 aa12.45□□□□□ -0.42
RFC4-201ENST00000296273 ZBBXA8MT70 800 aa12.45□□□□□ -0.42
RFC4-201ENST00000296273 ERC2O15083 957 aa12.45□□□□□ -0.42
RFC4-201ENST00000296273 ICAM1P05362 532 aa12.45□□□□□ -0.42
RFC4-201ENST00000296273 ATP2A2P16615 1042 aaKnown RBP12.45□□□□□ -0.42
RFC4-201ENST00000296273 CPT1AP50416 773 aa12.45□□□□□ -0.42
RFC4-201ENST00000296273 KCTD1Q719H9 257 aa12.45□□□□□ -0.42
RFC4-201ENST00000296273 EEPD1Q7L9B9 569 aa12.45□□□□□ -0.42
RFC4-201ENST00000296273 SKAP1Q86WV1 359 aa12.45□□□□□ -0.42
RFC4-201ENST00000296273 FBXO16Q8IX29 292 aaPredicted RBP12.45□□□□□ -0.42
RFC4-201ENST00000296273 PDGFCQ9NRA1 345 aa12.45□□□□□ -0.42
RFC4-201ENST00000296273 CCPG1Q9ULG6 757 aa12.45□□□□□ -0.42
RFC4-201ENST00000296273 PRR12Q9ULL5 1215 aa12.45□□□□□ -0.42
RFC4-201ENST00000296273 ACTN1P12814 892 aa12.44□□□□□ -0.42
RFC4-201ENST00000296273 POU3F3P20264 500 aaPredicted RBP12.44□□□□□ -0.42
RFC4-201ENST00000296273 RFC2P35250 354 aa12.44□□□□□ -0.42
RFC4-201ENST00000296273 PSMC6P62333 389 aa12.44□□□□□ -0.42
RFC4-201ENST00000296273 BECN1Q14457 450 aa12.44□□□□□ -0.42
RFC4-201ENST00000296273 BRDTQ58F21 947 aaPredicted RBP12.44□□□□□ -0.42
RFC4-201ENST00000296273 MUM1L1Q5H9M0 696 aa12.44□□□□□ -0.42
RFC4-201ENST00000296273 NSMFQ6X4W1 530 aa12.44□□□□□ -0.42
RFC4-201ENST00000296273 MPHOSPH6Q99547 160 aaKnown RBP12.44□□□□□ -0.42
RFC4-201ENST00000296273 GPHNQ9NQX3 736 aaPredicted RBP12.44□□□□□ -0.42
RFC4-201ENST00000296273 PNMA2Q9UL42 364 aa12.44□□□□□ -0.42
RFC4-201ENST00000296273 NKRFO15226 690 aaKnown RBP eCLIP12.43□□□□□ -0.42
RFC4-201ENST00000296273 GTPBP6O43824 516 aaPredicted RBP12.43□□□□□ -0.42
RFC4-201ENST00000296273 RABGGTBP53611 331 aa12.43□□□□□ -0.42
RFC4-201ENST00000296273 PURAQ00577 322 aaKnown RBP12.43□□□□□ -0.42
RFC4-201ENST00000296273 TMEM67Q5HYA8 995 aa12.43□□□□□ -0.42
RFC4-201ENST00000296273 ZMYM1Q5SVZ6 1142 aa12.43□□□□□ -0.42
RFC4-201ENST00000296273 TSHZ3Q63HK5 1081 aa12.43□□□□□ -0.42
RFC4-201ENST00000296273 PHOSPHO2Q8TCD6 241 aa12.43□□□□□ -0.42
RFC4-201ENST00000296273 DCAF4Q8WV16 495 aa12.43□□□□□ -0.42
RFC4-201ENST00000296273 SCLYQ96I15 445 aa12.43□□□□□ -0.42
RFC4-201ENST00000296273 SLC9A7Q96T83 725 aa12.43□□□□□ -0.42
RFC4-201ENST00000296273 SEC62Q99442 399 aaKnown RBP12.43□□□□□ -0.42
RFC4-201ENST00000296273 FSD1Q9BTV5 496 aa12.43□□□□□ -0.42
RFC4-201ENST00000296273 C1QTNF1Q9BXJ1 281 aa12.43□□□□□ -0.42
RFC4-201ENST00000296273 WDR11Q9BZH6 1224 aa12.43□□□□□ -0.42
RFC4-201ENST00000296273 RANBP17Q9H2T7 1088 aaKnown RBP12.43□□□□□ -0.42
RFC4-201ENST00000296273 IL17RBQ9NRM6 502 aa12.43□□□□□ -0.42
RFC4-201ENST00000296273 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.43□□□□□ -0.42
RFC4-201ENST00000296273 TNKSO95271 1327 aa12.43□□□□□ -0.42
RFC4-201ENST00000296273 RAD50Q92878 1312 aa12.43□□□□□ -0.42
RFC4-201ENST00000296273 GBF1Q92538 1859 aa12.43□□□□□ -0.42
RFC4-201ENST00000296273 RBM47A0AV96 593 aaKnown RBP12.43□□□□□ -0.42
RFC4-201ENST00000296273 PITPNM1O00562 1244 aa12.43□□□□□ -0.42
RFC4-201ENST00000296273 KPNA6O60684 536 aa12.43□□□□□ -0.42
RFC4-201ENST00000296273 BMP1P13497 986 aa12.43□□□□□ -0.42
RFC4-201ENST00000296273 NOVP48745 357 aa12.43□□□□□ -0.42
RFC4-201ENST00000296273 ALDH5A1P51649 535 aaPredicted RBP12.43□□□□□ -0.42
RFC4-201ENST00000296273 BTNL9Q6UXG8 535 aa12.43□□□□□ -0.42
RFC4-201ENST00000296273 MTG1Q9BT17 334 aaPredicted RBP12.43□□□□□ -0.42
RFC4-201ENST00000296273 LNPKQ9C0E8 428 aa12.43□□□□□ -0.42
RFC4-201ENST00000296273 KIF28PB7ZC32 967 aa12.42□□□□□ -0.42
RFC4-201ENST00000296273 MYOGP15173 224 aa12.42□□□□□ -0.42
RFC4-201ENST00000296273 PTGS1P23219 599 aa12.42□□□□□ -0.42
RFC4-201ENST00000296273 PTPN11Q06124 597 aaPredicted RBP12.42□□□□□ -0.42
RFC4-201ENST00000296273 BAATQ14032 418 aaPredicted RBP12.42□□□□□ -0.42
RFC4-201ENST00000296273 TTLL4Q14679 1199 aa12.42□□□□□ -0.42
RFC4-201ENST00000296273 SKIV2LQ15477 1246 aaKnown RBP12.42□□□□□ -0.42
RFC4-201ENST00000296273 CCDC96Q2M329 555 aa12.42□□□□□ -0.42
RFC4-201ENST00000296273 TMEM63BQ5T3F8 832 aa12.42□□□□□ -0.42
RFC4-201ENST00000296273 NFRKBQ6P4R8 1299 aa12.42□□□□□ -0.42
RFC4-201ENST00000296273 MICALL1Q8N3F8 863 aa12.42□□□□□ -0.42
RFC4-201ENST00000296273 OR6J1Q8NGC5 347 aa12.42□□□□□ -0.42
RFC4-201ENST00000296273 VWCEQ96DN2 955 aa12.42□□□□□ -0.42
RFC4-201ENST00000296273 TBC1D32Q96NH3 1257 aa12.42□□□□□ -0.42
RFC4-201ENST00000296273 TRMT13Q9NUP7 481 aaKnown RBP12.42□□□□□ -0.42
RFC4-201ENST00000296273 ANAPC4Q9UJX5 808 aa12.42□□□□□ -0.42
RFC4-201ENST00000296273 COG5Q9UP83 839 aa12.42□□□□□ -0.42
RFC4-201ENST00000296273 CHD9Q3L8U1 2897 aa12.41□□□□□ -0.42
RFC4-201ENST00000296273 PTPDC1A2A3K4 754 aa12.41□□□□□ -0.42
RFC4-201ENST00000296273 B4DLN1 442 aa12.41□□□□□ -0.42
RFC4-201ENST00000296273 RANBP6O60518 1105 aaKnown RBP12.41□□□□□ -0.42
RFC4-201ENST00000296273 CA3P07451 260 aa12.41□□□□□ -0.42
RFC4-201ENST00000296273 MYL3P08590 195 aa12.41□□□□□ -0.42
RFC4-201ENST00000296273 CYP2C9P11712 490 aa12.41□□□□□ -0.42
RFC4-201ENST00000296273 PLA2G5P39877 138 aa12.41□□□□□ -0.42
RFC4-201ENST00000296273 MRPL12P52815 198 aaKnown RBP12.41□□□□□ -0.42
RFC4-201ENST00000296273 SNAP25P60880 206 aa12.41□□□□□ -0.42
RFC4-201ENST00000296273 PPP2R5BQ15173 497 aa12.41□□□□□ -0.42
RFC4-201ENST00000296273 SYDE2Q5VT97 1194 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms