RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 MRPS25P82663 173 aaKnown RBP12.79□□□□□ -0.36
SNIP1-201ENST00000296215 MAGOHBQ96A72 148 aaKnown RBP12.79□□□□□ -0.36
SNIP1-201ENST00000296215 OLFML3Q9NRN5 406 aa12.79□□□□□ -0.36
SNIP1-201ENST00000296215 MOSPD1Q9UJG1 213 aa12.79□□□□□ -0.36
SNIP1-201ENST00000296215 ABLIM1O14639 778 aa12.79□□□□□ -0.36
SNIP1-201ENST00000296215 CALCOCO2Q13137 446 aa12.79□□□□□ -0.36
SNIP1-201ENST00000296215 CYTH1Q15438 398 aa12.79□□□□□ -0.36
SNIP1-201ENST00000296215 NDUFA5Q16718 116 aa12.79□□□□□ -0.36
SNIP1-201ENST00000296215 CCNI2Q6ZMN8 369 aaPredicted RBP12.79□□□□□ -0.36
SNIP1-201ENST00000296215 ZFAND2BQ8WV99 257 aa12.79□□□□□ -0.36
SNIP1-201ENST00000296215 TRIM47Q96LD4 638 aa12.79□□□□□ -0.36
SNIP1-201ENST00000296215 ARPC4-TTLL3A0A0A6YYG9 625 aa12.78□□□□□ -0.36
SNIP1-201ENST00000296215 OPLAHO14841 1288 aa12.78□□□□□ -0.36
SNIP1-201ENST00000296215 GSTA1P08263 222 aa12.78□□□□□ -0.36
SNIP1-201ENST00000296215 AFMP43652 599 aa12.78□□□□□ -0.36
SNIP1-201ENST00000296215 MCL1Q07820 350 aa12.78□□□□□ -0.36
SNIP1-201ENST00000296215 PUS10Q3MIT2 529 aaKnown RBP12.78□□□□□ -0.36
SNIP1-201ENST00000296215 RIOK1Q9BRS2 568 aaKnown RBP12.78□□□□□ -0.36
SNIP1-201ENST00000296215 CRNKL1Q9BZJ0 848 aaKnown RBP12.78□□□□□ -0.36
SNIP1-201ENST00000296215 IL1RAPL1Q9NZN1 696 aa12.78□□□□□ -0.36
SNIP1-201ENST00000296215 LRCH1Q9Y2L9 728 aa12.78□□□□□ -0.36
SNIP1-201ENST00000296215 IKBKBO14920 756 aa12.78□□□□□ -0.36
SNIP1-201ENST00000296215 GSPT1P15170 499 aaKnown RBP12.78□□□□□ -0.36
SNIP1-201ENST00000296215 TRIM16LQ309B1 348 aa12.78□□□□□ -0.36
SNIP1-201ENST00000296215 TRIM22Q8IYM9 498 aa12.78□□□□□ -0.36
SNIP1-201ENST00000296215 IRX2Q9BZI1 471 aaPredicted RBP12.78□□□□□ -0.36
SNIP1-201ENST00000296215 DISC1Q9NRI5 854 aa12.78□□□□□ -0.36
SNIP1-201ENST00000296215 DDX18Q9NVP1 670 aaKnown RBP12.78□□□□□ -0.36
SNIP1-201ENST00000296215 CIDEBQ9UHD4 219 aa12.78□□□□□ -0.36
SNIP1-201ENST00000296215 ANGPTL3Q9Y5C1 460 aa12.78□□□□□ -0.36
SNIP1-201ENST00000296215 ANKRD33BA6NCL7 494 aa12.78□□□□□ -0.36
SNIP1-201ENST00000296215 FOSL1P15407 271 aa12.78□□□□□ -0.36
SNIP1-201ENST00000296215 RNASELQ05823 741 aaKnown RBP12.78□□□□□ -0.36
SNIP1-201ENST00000296215 HACD3Q9P035 362 aa12.78□□□□□ -0.36
SNIP1-201ENST00000296215 ARHGEF25Q86VW2 580 aa12.77□□□□□ -0.36
SNIP1-201ENST00000296215 VPS37AQ8NEZ2 397 aa12.77□□□□□ -0.36
SNIP1-201ENST00000296215 DTX3LQ8TDB6 740 aa12.77□□□□□ -0.36
SNIP1-201ENST00000296215 NECTIN2Q92692 538 aa12.77□□□□□ -0.36
SNIP1-201ENST00000296215 METTL14Q9HCE5 456 aaKnown RBP12.77□□□□□ -0.36
SNIP1-201ENST00000296215 PCDH18Q9HCL0 1135 aa12.77□□□□□ -0.36
SNIP1-201ENST00000296215 FAM53CQ9NYF3 392 aa12.77□□□□□ -0.36
SNIP1-201ENST00000296215 VWA3AA6NCI4 1184 aa12.77□□□□□ -0.36
SNIP1-201ENST00000296215 GOLGA8JA6NMD2 632 aa12.77□□□□□ -0.36
SNIP1-201ENST00000296215 GOLGA8TH3BQL2 631 aa12.77□□□□□ -0.36
SNIP1-201ENST00000296215 SPAG7O75391 227 aa12.77□□□□□ -0.36
SNIP1-201ENST00000296215 DCTN3O75935 186 aa12.77□□□□□ -0.36
SNIP1-201ENST00000296215 GOLGA8HP0CJ92 632 aa12.77□□□□□ -0.36
SNIP1-201ENST00000296215 ST13P50502 369 aaKnown RBP12.77□□□□□ -0.36
SNIP1-201ENST00000296215 POSTNQ15063 836 aa12.77□□□□□ -0.36
SNIP1-201ENST00000296215 TAF7Q15545 349 aaPredicted RBP12.77□□□□□ -0.36
SNIP1-201ENST00000296215 PANX2Q96RD6 677 aa12.77□□□□□ -0.36
SNIP1-201ENST00000296215 NDE1Q9NXR1 346 aa12.77□□□□□ -0.36
SNIP1-201ENST00000296215 SAP30BPQ9UHR5 308 aaKnown RBP12.77□□□□□ -0.36
SNIP1-201ENST00000296215 U3KPZ7 1027 aaPredicted RBP12.77□□□□□ -0.36
SNIP1-201ENST00000296215 CARMIL1Q5VZK9 1371 aa12.77□□□□□ -0.36
SNIP1-201ENST00000296215 ZMYM4Q5VZL5 1548 aa12.77□□□□□ -0.36
SNIP1-201ENST00000296215 MAPK13O15264 365 aa12.77□□□□□ -0.37
SNIP1-201ENST00000296215 GHRP10912 638 aa12.77□□□□□ -0.37
SNIP1-201ENST00000296215 TMPOP42166 694 aaKnown RBP12.77□□□□□ -0.37
SNIP1-201ENST00000296215 KDM7AQ6ZMT4 941 aa12.77□□□□□ -0.37
SNIP1-201ENST00000296215 TRMT44Q8IYL2 757 aaKnown RBP12.77□□□□□ -0.37
SNIP1-201ENST00000296215 ARHGEF38Q9NXL2 777 aa12.77□□□□□ -0.37
SNIP1-201ENST00000296215 RGS12O14924 1447 aa12.77□□□□□ -0.37
SNIP1-201ENST00000296215 ATP9AO75110 1047 aa12.77□□□□□ -0.37
SNIP1-201ENST00000296215 RASSF3Q86WH2 238 aa12.77□□□□□ -0.37
SNIP1-201ENST00000296215 CDHR1Q96JP9 859 aa12.77□□□□□ -0.37
SNIP1-201ENST00000296215 EHD2Q9NZN4 543 aa12.77□□□□□ -0.37
SNIP1-201ENST00000296215 KDRP35968 1356 aa12.77□□□□□ -0.37
SNIP1-201ENST00000296215 UPP2O95045 317 aa12.76□□□□□ -0.37
SNIP1-201ENST00000296215 NPTXRO95502 500 aa12.76□□□□□ -0.37
SNIP1-201ENST00000296215 PPIDQ08752 370 aaKnown RBP12.76□□□□□ -0.37
SNIP1-201ENST00000296215 CADPS2Q86UW7 1296 aa12.76□□□□□ -0.37
SNIP1-201ENST00000296215 OTUD7AQ8TE49 926 aaPredicted RBP12.76□□□□□ -0.37
SNIP1-201ENST00000296215 KRT12Q99456 494 aa12.76□□□□□ -0.37
SNIP1-201ENST00000296215 BCAP29Q9UHQ4 241 aa12.76□□□□□ -0.37
SNIP1-201ENST00000296215 CBFA2T3O75081 653 aa12.76□□□□□ -0.37
SNIP1-201ENST00000296215 SLC4A2P04920 1241 aa12.76□□□□□ -0.37
SNIP1-201ENST00000296215 ATP1A3P13637 1013 aa12.76□□□□□ -0.37
SNIP1-201ENST00000296215 OCA2Q04671 838 aa12.76□□□□□ -0.37
SNIP1-201ENST00000296215 TJAP1Q5JTD0 557 aa12.76□□□□□ -0.37
SNIP1-201ENST00000296215 RNF220Q5VTB9 566 aa12.76□□□□□ -0.37
SNIP1-201ENST00000296215 AGGF1Q8N302 714 aaeCLIP12.76□□□□□ -0.37
SNIP1-201ENST00000296215 NOA1Q8NC60 698 aaKnown RBP12.76□□□□□ -0.37
SNIP1-201ENST00000296215 TUBB6Q9BUF5 446 aa12.76□□□□□ -0.37
SNIP1-201ENST00000296215 NUP58Q9BVL2 599 aa12.76□□□□□ -0.37
SNIP1-201ENST00000296215 TCP11L1Q9NUJ3 509 aa12.76□□□□□ -0.37
SNIP1-201ENST00000296215 PALD1Q9ULE6 856 aa12.76□□□□□ -0.37
SNIP1-201ENST00000296215 CCDC141Q6ZP82 1450 aa12.76□□□□□ -0.37
SNIP1-201ENST00000296215 SRGAP2O75044 1071 aa12.76□□□□□ -0.37
SNIP1-201ENST00000296215 WDR93Q6P2C0 686 aa12.76□□□□□ -0.37
SNIP1-201ENST00000296215 TMEM53Q6P2H8 277 aa12.76□□□□□ -0.37
SNIP1-201ENST00000296215 TLK2Q86UE8 772 aa12.76□□□□□ -0.37
SNIP1-201ENST00000296215 KRI1Q8N9T8 703 aaKnown RBP12.76□□□□□ -0.37
SNIP1-201ENST00000296215 SEPT8Q92599 483 aa12.76□□□□□ -0.37
SNIP1-201ENST00000296215 ANKRD2Q9GZV1 360 aa12.76□□□□□ -0.37
SNIP1-201ENST00000296215 RAB21Q9UL25 225 aa12.76□□□□□ -0.37
SNIP1-201ENST00000296215 PASKQ96RG2 1323 aa12.76□□□□□ -0.37
SNIP1-201ENST00000296215 GOLGA8IPA6NC78 632 aa12.76□□□□□ -0.37
SNIP1-201ENST00000296215 GYG2O15488 501 aa12.76□□□□□ -0.37
SNIP1-201ENST00000296215 OCM2P0CE71 109 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms