RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 RASSF8Q8NHQ8 419 aa10.34□□□□□ -0.75
PDPN-201ENST00000294489 AMNQ9BXJ7 453 aa10.34□□□□□ -0.75
PDPN-201ENST00000294489 KIAA1683Q9H0B3 1180 aa10.34□□□□□ -0.75
PDPN-201ENST00000294489 IMPACTQ9P2X3 320 aa10.34□□□□□ -0.75
PDPN-201ENST00000294489 BIN2Q9UBW5 565 aaPredicted RBP10.34□□□□□ -0.75
PDPN-201ENST00000294489 SCN4AP35499 1836 aa10.34□□□□□ -0.75
PDPN-201ENST00000294489 MEIS2O14770 477 aa10.33□□□□□ -0.76
PDPN-201ENST00000294489 OPLAHO14841 1288 aa10.33□□□□□ -0.76
PDPN-201ENST00000294489 CCNT1O60563 726 aaKnown RBP10.33□□□□□ -0.76
PDPN-201ENST00000294489 SERPINC1P01008 464 aa10.33□□□□□ -0.76
PDPN-201ENST00000294489 STAT2P52630 851 aa10.33□□□□□ -0.76
PDPN-201ENST00000294489 GSDMDP57764 484 aa10.33□□□□□ -0.76
PDPN-201ENST00000294489 FANCCQ00597 558 aa10.33□□□□□ -0.76
PDPN-201ENST00000294489 DHX8Q14562 1220 aaKnown RBP10.33□□□□□ -0.76
PDPN-201ENST00000294489 DNTTIP2Q5QJE6 756 aaKnown RBP10.33□□□□□ -0.76
PDPN-201ENST00000294489 FILIP1Q7Z7B0 1213 aa10.33□□□□□ -0.76
PDPN-201ENST00000294489 XPO4Q9C0E2 1151 aaKnown RBP10.33□□□□□ -0.76
PDPN-201ENST00000294489 PSTPIP2Q9H939 334 aa10.33□□□□□ -0.76
PDPN-201ENST00000294489 FEM1BQ9UK73 627 aa10.33□□□□□ -0.76
PDPN-201ENST00000294489 PCDHA1Q9Y5I3 950 aa10.33□□□□□ -0.76
PDPN-201ENST00000294489 SMCHD1A6NHR9 2005 aa10.33□□□□□ -0.76
PDPN-201ENST00000294489 PTPRFP10586 1907 aa10.33□□□□□ -0.76
PDPN-201ENST00000294489 CYP3A7-CYP3A51PA0A087WV96 503 aa10.33□□□□□ -0.76
PDPN-201ENST00000294489 RAD21O60216 631 aa10.33□□□□□ -0.76
PDPN-201ENST00000294489 CYP3A7P24462 503 aa10.33□□□□□ -0.76
PDPN-201ENST00000294489 UBA7P41226 1012 aa10.33□□□□□ -0.76
PDPN-201ENST00000294489 TRAF1Q13077 416 aa10.33□□□□□ -0.76
PDPN-201ENST00000294489 CCDC144BQ3MJ40 725 aa10.33□□□□□ -0.76
PDPN-201ENST00000294489 MOXD1Q6UVY6 613 aa10.33□□□□□ -0.76
PDPN-201ENST00000294489 ENOX1Q8TC92 643 aaKnown RBP10.33□□□□□ -0.76
PDPN-201ENST00000294489 AK8Q96MA6 479 aa10.33□□□□□ -0.76
PDPN-201ENST00000294489 WDR18Q9BV38 432 aa10.33□□□□□ -0.76
PDPN-201ENST00000294489 ZNF341Q9BYN7 854 aa10.33□□□□□ -0.76
PDPN-201ENST00000294489 CCSER1Q9C0I3 900 aa10.33□□□□□ -0.76
PDPN-201ENST00000294489 ERCC5P28715 1186 aaPredicted RBP10.33□□□□□ -0.76
PDPN-201ENST00000294489 STAT6P42226 847 aa10.33□□□□□ -0.76
PDPN-201ENST00000294489 DPYDQ12882 1025 aa10.33□□□□□ -0.76
PDPN-201ENST00000294489 AP3B2Q13367 1082 aa10.33□□□□□ -0.76
PDPN-201ENST00000294489 NOL9Q5SY16 702 aaKnown RBP10.33□□□□□ -0.76
PDPN-201ENST00000294489 NBPF12Q5TAG4 269 aaPredicted RBP10.33□□□□□ -0.76
PDPN-201ENST00000294489 ANGEL2Q5VTE6 544 aaKnown RBP10.33□□□□□ -0.76
PDPN-201ENST00000294489 JAKMIP3Q5VZ66 844 aa10.33□□□□□ -0.76
PDPN-201ENST00000294489 DCAF15Q66K64 600 aa10.33□□□□□ -0.76
PDPN-201ENST00000294489 PDXDC2PQ6P474 469 aa10.33□□□□□ -0.76
PDPN-201ENST00000294489 FBXO11Q86XK2 927 aa10.33□□□□□ -0.76
PDPN-201ENST00000294489 CHURC1Q8WUH1 139 aa10.33□□□□□ -0.76
PDPN-201ENST00000294489 LPAR1Q92633 364 aa10.33□□□□□ -0.76
PDPN-201ENST00000294489 NAP1L4Q99733 375 aaKnown RBP10.33□□□□□ -0.76
PDPN-201ENST00000294489 GLIS2Q9BZE0 524 aaPredicted RBP10.33□□□□□ -0.76
PDPN-201ENST00000294489 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.33□□□□□ -0.76
PDPN-201ENST00000294489 PYCARDQ9ULZ3 195 aa10.33□□□□□ -0.76
PDPN-201ENST00000294489 OR52Z1P0C646 297 aa10.32□□□□□ -0.76
PDPN-201ENST00000294489 UBASH3AP57075 661 aa10.32□□□□□ -0.76
PDPN-201ENST00000294489 FAM83BQ5T0W9 1011 aa10.32□□□□□ -0.76
PDPN-201ENST00000294489 LRRC8AQ8IWT6 810 aa10.32□□□□□ -0.76
PDPN-201ENST00000294489 IGSF22Q8N9C0 903 aa10.32□□□□□ -0.76
PDPN-201ENST00000294489 DISC1Q9NRI5 854 aa10.32□□□□□ -0.76
PDPN-201ENST00000294489 SPTLC3Q9NUV7 552 aa10.32□□□□□ -0.76
PDPN-201ENST00000294489 FANCLQ9NW38 375 aa10.32□□□□□ -0.76
PDPN-201ENST00000294489 GTPBP6O43824 516 aaPredicted RBP10.32□□□□□ -0.76
PDPN-201ENST00000294489 GCFC2P16383 781 aaKnown RBP10.32□□□□□ -0.76
PDPN-201ENST00000294489 EPS15P42566 896 aa10.32□□□□□ -0.76
PDPN-201ENST00000294489 FXR2P51116 673 aaKnown RBP eCLIP10.32□□□□□ -0.76
PDPN-201ENST00000294489 USP11P51784 963 aa10.32□□□□□ -0.76
PDPN-201ENST00000294489 GHRHRQ02643 423 aa10.32□□□□□ -0.76
PDPN-201ENST00000294489 LRMPQ12912 555 aa10.32□□□□□ -0.76
PDPN-201ENST00000294489 RRAGBQ5VZM2 374 aa10.32□□□□□ -0.76
PDPN-201ENST00000294489 CACTINQ8WUQ7 758 aaKnown RBP10.32□□□□□ -0.76
PDPN-201ENST00000294489 HSD3B7Q9H2F3 369 aa10.32□□□□□ -0.76
PDPN-201ENST00000294489 WDR46O15213 610 aaKnown RBP10.31□□□□□ -0.76
PDPN-201ENST00000294489 ATP1A3P13637 1013 aa10.31□□□□□ -0.76
PDPN-201ENST00000294489 CDK11BP21127 795 aaKnown RBP10.31□□□□□ -0.76
PDPN-201ENST00000294489 UBE2SQ16763 222 aa10.31□□□□□ -0.76
PDPN-201ENST00000294489 L3MBTL3Q96JM7 780 aaPredicted RBP10.31□□□□□ -0.76
PDPN-201ENST00000294489 P2RX7Q99572 595 aaKnown RBP10.31□□□□□ -0.76
PDPN-201ENST00000294489 RMND1Q9NWS8 449 aa10.31□□□□□ -0.76
PDPN-201ENST00000294489 NFE2L3Q9Y4A8 694 aa10.31□□□□□ -0.76
PDPN-201ENST00000294489 A0A0G2JMZ2 1700 aa10.31□□□□□ -0.76
PDPN-201ENST00000294489 COL11A1P12107 1806 aaPredicted RBP10.31□□□□□ -0.76
PDPN-201ENST00000294489 CDC25AP30304 524 aa10.31□□□□□ -0.76
PDPN-201ENST00000294489 KARSQ15046 597 aaKnown RBP10.31□□□□□ -0.76
PDPN-201ENST00000294489 TMC6Q7Z403 805 aa10.31□□□□□ -0.76
PDPN-201ENST00000294489 SCYL3Q8IZE3 742 aa10.31□□□□□ -0.76
PDPN-201ENST00000294489 SPICE1Q8N0Z3 855 aa10.31□□□□□ -0.76
PDPN-201ENST00000294489 ADARB2Q9NS39 739 aaKnown RBP10.31□□□□□ -0.76
PDPN-201ENST00000294489 NRDCO43847 1150 aa10.31□□□□□ -0.76
PDPN-201ENST00000294489 PDIA5Q14554 519 aa10.31□□□□□ -0.76
PDPN-201ENST00000294489 C17orf53Q8N3J3 647 aaPredicted RBP10.31□□□□□ -0.76
PDPN-201ENST00000294489 STAMQ92783 540 aa10.31□□□□□ -0.76
PDPN-201ENST00000294489 C12orf42Q96LP6 360 aa10.31□□□□□ -0.76
PDPN-201ENST00000294489 SCAF8Q9UPN6 1271 aaKnown RBP10.31□□□□□ -0.76
PDPN-201ENST00000294489 ZC3H4Q9UPT8 1303 aaKnown RBP10.31□□□□□ -0.76
PDPN-201ENST00000294489 SLC26A4O43511 780 aa10.3□□□□□ -0.76
PDPN-201ENST00000294489 FOSP01100 380 aaPredicted RBP10.3□□□□□ -0.76
PDPN-201ENST00000294489 MYL1P05976 194 aa10.3□□□□□ -0.76
PDPN-201ENST00000294489 CYP3A4P08684 503 aa10.3□□□□□ -0.76
PDPN-201ENST00000294489 CASP1P29466 404 aa10.3□□□□□ -0.76
PDPN-201ENST00000294489 FMR1Q06787 632 aaKnown RBP eCLIP10.3□□□□□ -0.76
PDPN-201ENST00000294489 CCDC150Q8NCX0 1101 aa10.3□□□□□ -0.76
PDPN-201ENST00000294489 CUEDC2Q9H467 287 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms