RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 FAM47CQ5HY64 1035 aa17.58■□□□□ 0.41
SSRP1-202ENST00000293880 ZBTB41Q5SVQ8 909 aa17.58■□□□□ 0.41
SSRP1-202ENST00000293880 MAP3K21Q5TCX8 1036 aa17.58■□□□□ 0.41
SSRP1-202ENST00000293880 COPB1P53618 953 aaKnown RBP17.58■□□□□ 0.4
SSRP1-202ENST00000293880 SKOR1P84550 965 aa17.58■□□□□ 0.4
SSRP1-202ENST00000293880 EP400NLQ6ZTU2 488 aa17.58■□□□□ 0.4
SSRP1-202ENST00000293880 INTS9Q9NV88 658 aaKnown RBP17.58■□□□□ 0.4
SSRP1-202ENST00000293880 IVNS1ABPQ9Y6Y0 642 aa17.58■□□□□ 0.4
SSRP1-202ENST00000293880 ALAS1P13196 640 aa17.58■□□□□ 0.4
SSRP1-202ENST00000293880 POLA2Q14181 598 aa17.58■□□□□ 0.4
SSRP1-202ENST00000293880 PLCB4Q15147 1175 aa17.58■□□□□ 0.4
SSRP1-202ENST00000293880 CCDC197Q8NCU1 140 aa17.58■□□□□ 0.4
SSRP1-202ENST00000293880 RASGRP4Q8TDF6 673 aa17.58■□□□□ 0.4
SSRP1-202ENST00000293880 GJA10Q969M2 543 aa17.58■□□□□ 0.4
SSRP1-202ENST00000293880 FTOQ9C0B1 505 aaKnown RBP eCLIP17.58■□□□□ 0.47e-8■■■■■ 31.6
SSRP1-202ENST00000293880 FNDC3AQ9Y2H6 1198 aaKnown RBP17.58■□□□□ 0.4
SSRP1-202ENST00000293880 EIF4G3O43432 1585 aaKnown RBP17.58■□□□□ 0.4
SSRP1-202ENST00000293880 GNGT2O14610 69 aa17.58■□□□□ 0.4
SSRP1-202ENST00000293880 TNNC2P02585 160 aa17.58■□□□□ 0.4
SSRP1-202ENST00000293880 SDCCAG3Q96C92 435 aa17.58■□□□□ 0.4
SSRP1-202ENST00000293880 PPP1R16BQ96T49 567 aa17.58■□□□□ 0.4
SSRP1-202ENST00000293880 MLXIPQ9HAP2 919 aa17.58■□□□□ 0.4
SSRP1-202ENST00000293880 PCDHB4Q9Y5E5 795 aa17.58■□□□□ 0.4
SSRP1-202ENST00000293880 GYG1P46976 350 aa17.57■□□□□ 0.4
SSRP1-202ENST00000293880 IRX4P78413 519 aa17.57■□□□□ 0.4
SSRP1-202ENST00000293880 SUGCTQ9HAC7 445 aa17.57■□□□□ 0.4
SSRP1-202ENST00000293880 USP21Q9UK80 565 aa17.57■□□□□ 0.4
SSRP1-202ENST00000293880 SYF2O95926 243 aaKnown RBP17.57■□□□□ 0.4
SSRP1-202ENST00000293880 BCAMP50895 628 aa17.57■□□□□ 0.4
SSRP1-202ENST00000293880 NLRX1Q86UT6 975 aa17.57■□□□□ 0.4
SSRP1-202ENST00000293880 MYLK4Q86YV6 388 aaPredicted RBP17.57■□□□□ 0.4
SSRP1-202ENST00000293880 PCIF1Q9H4Z3 704 aa17.57■□□□□ 0.4
SSRP1-202ENST00000293880 GCKRQ14397 625 aa17.57■□□□□ 0.4
SSRP1-202ENST00000293880 CYP4F22Q6NT55 531 aa17.57■□□□□ 0.4
SSRP1-202ENST00000293880 MTMR6Q9Y217 621 aa17.57■□□□□ 0.4
SSRP1-202ENST00000293880 M0R2C6 588 aa17.57■□□□□ 0.4
SSRP1-202ENST00000293880 ARMCX5Q6P1M9 558 aa17.57■□□□□ 0.4
SSRP1-202ENST00000293880 DSCC1Q9BVC3 393 aa17.57■□□□□ 0.4
SSRP1-202ENST00000293880 SPATS2Q86XZ4 545 aaKnown RBP17.57■□□□□ 0.4
SSRP1-202ENST00000293880 PPWD1Q96BP3 646 aaKnown RBP17.57■□□□□ 0.4
SSRP1-202ENST00000293880 SPATA17Q96L03 361 aa17.57■□□□□ 0.4
SSRP1-202ENST00000293880 PASKQ96RG2 1323 aa17.56■□□□□ 0.4
SSRP1-202ENST00000293880 IL13P35225 146 aa17.56■□□□□ 0.4
SSRP1-202ENST00000293880 ZNF653Q96CK0 615 aa17.56■□□□□ 0.4
SSRP1-202ENST00000293880 NT5C3AQ9H0P0 336 aa17.56■□□□□ 0.4
SSRP1-202ENST00000293880 TOM1L1O75674 476 aa17.56■□□□□ 0.4
SSRP1-202ENST00000293880 GARSP41250 739 aaKnown RBP17.56■□□□□ 0.4
SSRP1-202ENST00000293880 USP17L12C9JPN9 530 aa17.56■□□□□ 0.4
SSRP1-202ENST00000293880 USP17L21D6R901 530 aa17.56■□□□□ 0.4
SSRP1-202ENST00000293880 DKC1O60832 514 aaKnown RBP eCLIP17.56■□□□□ 0.4
SSRP1-202ENST00000293880 IFNL3Q8IZI9 196 aa17.56■□□□□ 0.4
SSRP1-202ENST00000293880 AP1M1Q9BXS5 423 aa17.56■□□□□ 0.4
SSRP1-202ENST00000293880 SLC52A2Q9HAB3 445 aa17.56■□□□□ 0.4
SSRP1-202ENST00000293880 UGGT2Q9NYU1 1516 aa17.56■□□□□ 0.4
SSRP1-202ENST00000293880 MROH5Q6ZUA9 1318 aa17.56■□□□□ 0.4
SSRP1-202ENST00000293880 INHBAP08476 426 aa17.56■□□□□ 0.4
SSRP1-202ENST00000293880 TAF11Q15544 211 aa17.56■□□□□ 0.4
SSRP1-202ENST00000293880 RINT1Q6NUQ1 792 aa17.56■□□□□ 0.4
SSRP1-202ENST00000293880 TYW1Q9NV66 732 aaKnown RBP17.56■□□□□ 0.4
SSRP1-202ENST00000293880 PIK3C2GO75747 1445 aa17.56■□□□□ 0.4
SSRP1-202ENST00000293880 BTBD18B2RXH4 712 aa17.56■□□□□ 0.4
SSRP1-202ENST00000293880 LRRN2O75325 713 aa17.56■□□□□ 0.4
SSRP1-202ENST00000293880 OR52Z1P0C646 297 aa17.56■□□□□ 0.4
SSRP1-202ENST00000293880 GTF2IP78347 998 aa17.56■□□□□ 0.4
SSRP1-202ENST00000293880 DOK7Q18PE1 504 aa17.56■□□□□ 0.4
SSRP1-202ENST00000293880 YIPF3Q9GZM5 350 aa17.56■□□□□ 0.4
SSRP1-202ENST00000293880 PALMDQ9NP74 551 aa17.56■□□□□ 0.4
SSRP1-202ENST00000293880 CLIC2O15247 247 aa17.55■□□□□ 0.4
SSRP1-202ENST00000293880 ZNF500O60304 480 aaPredicted RBP17.55■□□□□ 0.4
SSRP1-202ENST00000293880 PLTPP55058 493 aa17.55■□□□□ 0.4
SSRP1-202ENST00000293880 ZNF449Q6P9G9 518 aa17.55■□□□□ 0.4
SSRP1-202ENST00000293880 LARGE2Q8N3Y3 721 aa17.55■□□□□ 0.4
SSRP1-202ENST00000293880 RTEL1Q9NZ71 1219 aa17.55■□□□□ 0.4
SSRP1-202ENST00000293880 PCDHA12Q9UN75 941 aa17.55■□□□□ 0.4
SSRP1-202ENST00000293880 EPN1Q9Y6I3 576 aaPredicted RBP17.55■□□□□ 0.4
SSRP1-202ENST00000293880 SH3TC1Q8TE82 1336 aa17.55■□□□□ 0.4
SSRP1-202ENST00000293880 ASPHQ12797 758 aa17.55■□□□□ 0.4
SSRP1-202ENST00000293880 IP6K1Q92551 441 aa17.55■□□□□ 0.4
SSRP1-202ENST00000293880 IRAK4Q9NWZ3 460 aa17.55■□□□□ 0.4
SSRP1-202ENST00000293880 ARMCX3Q9UH62 379 aaPredicted RBP17.55■□□□□ 0.4
SSRP1-202ENST00000293880 GSTA4O15217 222 aa17.55■□□□□ 0.4
SSRP1-202ENST00000293880 KCNQ3O43525 872 aa17.55■□□□□ 0.4
SSRP1-202ENST00000293880 EAPPQ56P03 285 aaPredicted RBP17.55■□□□□ 0.4
SSRP1-202ENST00000293880 LZTS2Q9BRK4 669 aa17.55■□□□□ 0.4
SSRP1-202ENST00000293880 KIF9Q9HAQ2 790 aa17.55■□□□□ 0.4
SSRP1-202ENST00000293880 IL9RQ01113 521 aa17.55■□□□□ 0.4
SSRP1-202ENST00000293880 HAUS1Q96CS2 278 aa17.55■□□□□ 0.4
SSRP1-202ENST00000293880 RPGRIP1Q96KN7 1286 aa17.55■□□□□ 0.4
SSRP1-202ENST00000293880 TTC4O95801 387 aa17.55■□□□□ 0.4
SSRP1-202ENST00000293880 GNL1P36915 607 aaPredicted RBP17.55■□□□□ 0.4
SSRP1-202ENST00000293880 YWHAEP62258 255 aaKnown RBP17.55■□□□□ 0.4
SSRP1-202ENST00000293880 TMEM259Q4ZIN3 620 aa17.55■□□□□ 0.4
SSRP1-202ENST00000293880 TMTC3Q6ZXV5 915 aa17.55■□□□□ 0.4
SSRP1-202ENST00000293880 FAM133AQ8N9E0 248 aa17.55■□□□□ 0.4
SSRP1-202ENST00000293880 CYTH2Q99418 400 aa17.55■□□□□ 0.4
SSRP1-202ENST00000293880 ITSN2Q9NZM3 1697 aa17.54■□□□□ 0.4
SSRP1-202ENST00000293880 PTGDRQ13258 359 aa17.54■□□□□ 0.4
SSRP1-202ENST00000293880 NLRP7Q8WX94 980 aa17.54■□□□□ 0.4
SSRP1-202ENST00000293880 KIAA0556O60303 1618 aa17.54■□□□□ 0.4
SSRP1-202ENST00000293880 MEIS1O00470 390 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms