RNA–Protein interactions for RNA: ENST00000292303.4

CCR5-201, Transcript of C-C motif chemokine receptor 5 (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCR5, Length 3,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR5-201ENST00000292303 CDKAL1Q5VV42 579 aa6.49□□□□□ -1.37
CCR5-201ENST00000292303 PDXDC2PQ6P474 469 aa6.49□□□□□ -1.37
CCR5-201ENST00000292303 USP17L2Q6R6M4 530 aa6.49□□□□□ -1.37
CCR5-201ENST00000292303 SLC30A10Q6XR72 485 aa6.49□□□□□ -1.37
CCR5-201ENST00000292303 RSRC2Q7L4I2 434 aaKnown RBP6.49□□□□□ -1.37
CCR5-201ENST00000292303 DYMQ7RTS9 669 aa6.49□□□□□ -1.37
CCR5-201ENST00000292303 C4orf32Q8N8J7 132 aa6.49□□□□□ -1.37
CCR5-201ENST00000292303 TRIML1Q8N9V2 468 aa6.49□□□□□ -1.37
CCR5-201ENST00000292303 LRRC15Q8TF66 581 aa6.49□□□□□ -1.37
CCR5-201ENST00000292303 RPGRQ92834 1020 aaKnown RBP6.49□□□□□ -1.37
CCR5-201ENST00000292303 CDCA7Q9BWT1 371 aaPredicted RBP6.49□□□□□ -1.37
CCR5-201ENST00000292303 TANGO6Q9C0B7 1094 aa6.49□□□□□ -1.37
CCR5-201ENST00000292303 MMRN2Q9H8L6 949 aa6.49□□□□□ -1.37
CCR5-201ENST00000292303 PKD2L1Q9P0L9 805 aa6.49□□□□□ -1.37
CCR5-201ENST00000292303 ADD3Q9UEY8 706 aaKnown RBP6.49□□□□□ -1.37
CCR5-201ENST00000292303 CTNND2Q9UQB3 1225 aa6.49□□□□□ -1.37
CCR5-201ENST00000292303 THRAP3Q9Y2W1 955 aaKnown RBP6.49□□□□□ -1.37
CCR5-201ENST00000292303 IRS2Q9Y4H2 1338 aa6.49□□□□□ -1.37
CCR5-201ENST00000292303 EFCAB8A8MWE9 144 aa6.48□□□□□ -1.37
CCR5-201ENST00000292303 ORC4O43929 436 aa6.48□□□□□ -1.37
CCR5-201ENST00000292303 TRIM37O94972 964 aa6.48□□□□□ -1.37
CCR5-201ENST00000292303 SCG2P13521 617 aa6.48□□□□□ -1.37
CCR5-201ENST00000292303 ERCC5P28715 1186 aaPredicted RBP6.48□□□□□ -1.37
CCR5-201ENST00000292303 USP8P40818 1118 aa6.48□□□□□ -1.37
CCR5-201ENST00000292303 RNASE9P60153 205 aaKnown RBP6.48□□□□□ -1.37
CCR5-201ENST00000292303 GTF2IP78347 998 aa6.48□□□□□ -1.37
CCR5-201ENST00000292303 NBPF20Q3BBV1 942 aa6.48□□□□□ -1.37
CCR5-201ENST00000292303 SPATA1Q5VX52 437 aa6.48□□□□□ -1.37
CCR5-201ENST00000292303 FCHSD1Q86WN1 690 aa6.48□□□□□ -1.37
CCR5-201ENST00000292303 PSMD1Q99460 953 aa6.48□□□□□ -1.37
CCR5-201ENST00000292303 KAT14Q9H8E8 782 aa6.48□□□□□ -1.37
CCR5-201ENST00000292303 RBM28Q9NW13 759 aaKnown RBP6.48□□□□□ -1.37
CCR5-201ENST00000292303 SBF2Q86WG5 1849 aa6.48□□□□□ -1.37
CCR5-201ENST00000292303 SYNRGQ9UMZ2 1314 aa6.48□□□□□ -1.37
CCR5-201ENST00000292303 N4BP3O15049 544 aa6.48□□□□□ -1.37
CCR5-201ENST00000292303 STX10O60499 249 aa6.48□□□□□ -1.37
CCR5-201ENST00000292303 DDAH1O94760 285 aa6.48□□□□□ -1.37
CCR5-201ENST00000292303 XBP1P17861 261 aa6.48□□□□□ -1.37
CCR5-201ENST00000292303 CDC25CP30307 473 aa6.48□□□□□ -1.37
CCR5-201ENST00000292303 CASP14P31944 242 aa6.48□□□□□ -1.37
CCR5-201ENST00000292303 FXR1P51114 621 aaKnown RBP eCLIP6.48□□□□□ -1.37
CCR5-201ENST00000292303 PPP2R5BQ15173 497 aa6.48□□□□□ -1.37
CCR5-201ENST00000292303 PFKFB3Q16875 520 aaPredicted RBP6.48□□□□□ -1.37
CCR5-201ENST00000292303 SPTY2D1Q68D10 685 aaPredicted RBP6.48□□□□□ -1.37
CCR5-201ENST00000292303 KANK3Q6NY19 840 aa6.48□□□□□ -1.37
CCR5-201ENST00000292303 SH3RF3Q8TEJ3 882 aaPredicted RBP6.48□□□□□ -1.37
CCR5-201ENST00000292303 KAT2BQ92831 832 aa6.48□□□□□ -1.37
CCR5-201ENST00000292303 MKRN1Q9UHC7 482 aaKnown RBP6.48□□□□□ -1.37
CCR5-201ENST00000292303 ODF2LQ9ULJ1 636 aa6.48□□□□□ -1.37
CCR5-201ENST00000292303 GDAQ9Y2T3 454 aa6.48□□□□□ -1.37
CCR5-201ENST00000292303 RTCBQ9Y3I0 505 aaKnown RBP6.48□□□□□ -1.37
CCR5-201ENST00000292303 CCDC194A0A1B0GVG4 234 aa6.48□□□□□ -1.37
CCR5-201ENST00000292303 MYO1FO00160 1098 aa6.48□□□□□ -1.37
CCR5-201ENST00000292303 CYTH3O43739 400 aa6.48□□□□□ -1.37
CCR5-201ENST00000292303 MYO1BO43795 1136 aa6.48□□□□□ -1.37
CCR5-201ENST00000292303 PPP1R12BO60237 982 aaPredicted RBP6.48□□□□□ -1.37
CCR5-201ENST00000292303 GBP2P32456 591 aaPredicted RBP6.48□□□□□ -1.37
CCR5-201ENST00000292303 ZNF772Q68DY9 489 aaPredicted RBP6.48□□□□□ -1.37
CCR5-201ENST00000292303 CC2D1AQ6P1N0 951 aaPredicted RBP6.48□□□□□ -1.37
CCR5-201ENST00000292303 IGSF22Q8N9C0 903 aa6.48□□□□□ -1.37
CCR5-201ENST00000292303 FERMT2Q96AC1 680 aa6.48□□□□□ -1.37
CCR5-201ENST00000292303 CAPZA3Q96KX2 299 aa6.48□□□□□ -1.37
CCR5-201ENST00000292303 NUP88Q99567 741 aaPredicted RBP6.48□□□□□ -1.37
CCR5-201ENST00000292303 PARD6BQ9BYG5 372 aa6.48□□□□□ -1.37
CCR5-201ENST00000292303 TMEM60Q9H2L4 133 aa6.48□□□□□ -1.37
CCR5-201ENST00000292303 KIF9Q9HAQ2 790 aa6.48□□□□□ -1.37
CCR5-201ENST00000292303 TNRC6CQ9HCJ0 1690 aaKnown RBP6.47□□□□□ -1.37
CCR5-201ENST00000292303 EME2A4GXA9 379 aaPredicted RBP6.47□□□□□ -1.37
CCR5-201ENST00000292303 TRIM49BA6NDI0 452 aa6.47□□□□□ -1.37
CCR5-201ENST00000292303 RGL2O15211 777 aa6.47□□□□□ -1.37
CCR5-201ENST00000292303 CCP110O43303 1012 aa6.47□□□□□ -1.37
CCR5-201ENST00000292303 ZSCAN12O43309 604 aa6.47□□□□□ -1.37
CCR5-201ENST00000292303 GYPCP04921 128 aa6.47□□□□□ -1.37
CCR5-201ENST00000292303 TNNI2P48788 182 aa6.47□□□□□ -1.37
CCR5-201ENST00000292303 PMS1P54277 932 aaKnown RBP6.47□□□□□ -1.37
CCR5-201ENST00000292303 KIAA0825Q8IV33 1275 aa6.47□□□□□ -1.37
CCR5-201ENST00000292303 KCTD17Q8N5Z5 321 aa6.47□□□□□ -1.37
CCR5-201ENST00000292303 ANKRD13CQ8N6S4 541 aa6.47□□□□□ -1.37
CCR5-201ENST00000292303 GSDMAQ96QA5 445 aa6.47□□□□□ -1.37
CCR5-201ENST00000292303 CRNKL1Q9BZJ0 848 aaKnown RBP6.47□□□□□ -1.37
CCR5-201ENST00000292303 TRIM6Q9C030 488 aaPredicted RBP6.47□□□□□ -1.37
CCR5-201ENST00000292303 ACBD3Q9H3P7 528 aa6.47□□□□□ -1.37
CCR5-201ENST00000292303 DACH1Q9UI36 760 aa6.47□□□□□ -1.37
CCR5-201ENST00000292303 BCS1LQ9Y276 419 aa6.47□□□□□ -1.37
CCR5-201ENST00000292303 CDK5RAP2Q96SN8 1893 aa6.47□□□□□ -1.37
CCR5-201ENST00000292303 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.47□□□□□ -1.37
CCR5-201ENST00000292303 AKR1B15C9JRZ8 316 aaPredicted RBP6.47□□□□□ -1.37
CCR5-201ENST00000292303 LGR5O75473 907 aa6.47□□□□□ -1.37
CCR5-201ENST00000292303 CALM1P0DP23 149 aa6.47□□□□□ -1.37
CCR5-201ENST00000292303 CALM2P0DP24 149 aa6.47□□□□□ -1.37
CCR5-201ENST00000292303 CALM3P0DP25 149 aa6.47□□□□□ -1.37
CCR5-201ENST00000292303 ELF1P32519 619 aa6.47□□□□□ -1.37
CCR5-201ENST00000292303 TXKP42681 527 aa6.47□□□□□ -1.37
CCR5-201ENST00000292303 CCNHP51946 323 aaPredicted RBP6.47□□□□□ -1.37
CCR5-201ENST00000292303 CORO7P57737 925 aa6.47□□□□□ -1.37
CCR5-201ENST00000292303 KRT31Q15323 416 aa6.47□□□□□ -1.37
CCR5-201ENST00000292303 NAALADL2Q58DX5 795 aa6.47□□□□□ -1.37
CCR5-201ENST00000292303 MFSD4BQ5TF39 518 aa6.47□□□□□ -1.37
CCR5-201ENST00000292303 TPTE2Q6XPS3 522 aa6.47□□□□□ -1.37
CCR5-201ENST00000292303 BARGINQ6ZT62 677 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms