RNA–Protein interactions for RNA: ENST00000289448.2

HMHB1-201, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HMHB1, Length 384 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-201ENST00000289448 GRIN2DO15399 1336 aa11.17□□□□□ -0.62
HMHB1-201ENST00000289448 WDR19Q8NEZ3 1342 aa11.17□□□□□ -0.62
HMHB1-201ENST00000289448 DCDC2CA8MYV0 355 aa11.17□□□□□ -0.62
HMHB1-201ENST00000289448 ARVCFO00192 962 aa11.17□□□□□ -0.62
HMHB1-201ENST00000289448 CYP21A2P08686 494 aa11.17□□□□□ -0.62
HMHB1-201ENST00000289448 NT5C2P49902 561 aa11.17□□□□□ -0.62
HMHB1-201ENST00000289448 RPS6P62753 249 aaKnown RBP11.17□□□□□ -0.62
HMHB1-201ENST00000289448 SEC23AQ15436 765 aa11.17□□□□□ -0.62
HMHB1-201ENST00000289448 CDC37Q16543 378 aaPredicted RBP11.17□□□□□ -0.62
HMHB1-201ENST00000289448 FSCN1Q16658 493 aaKnown RBP11.17□□□□□ -0.62
HMHB1-201ENST00000289448 USH1GQ495M9 461 aa11.17□□□□□ -0.62
HMHB1-201ENST00000289448 CCDC178Q5BJE1 867 aa11.17□□□□□ -0.62
HMHB1-201ENST00000289448 IQSEC1Q6DN90 963 aa11.17□□□□□ -0.62
HMHB1-201ENST00000289448 RNF207Q6ZRF8 634 aa11.17□□□□□ -0.62
HMHB1-201ENST00000289448 KIAA1211Q6ZU35 1233 aa11.17□□□□□ -0.62
HMHB1-201ENST00000289448 VTI1AQ96AJ9 217 aa11.17□□□□□ -0.62
HMHB1-201ENST00000289448 KRT23Q9C075 422 aa11.17□□□□□ -0.62
HMHB1-201ENST00000289448 VTA1Q9NP79 307 aa11.17□□□□□ -0.62
HMHB1-201ENST00000289448 TBX21Q9UL17 535 aa11.17□□□□□ -0.62
HMHB1-201ENST00000289448 LRRC37A2A6NM11 1700 aa11.17□□□□□ -0.62
HMHB1-201ENST00000289448 RAD50Q92878 1312 aa11.16□□□□□ -0.62
HMHB1-201ENST00000289448 A0A0U1RQG5 324 aaPredicted RBP11.16□□□□□ -0.62
HMHB1-201ENST00000289448 RBM47A0AV96 593 aaKnown RBP11.16□□□□□ -0.62
HMHB1-201ENST00000289448 RAG1P15918 1043 aa11.16□□□□□ -0.62
HMHB1-201ENST00000289448 EDNRBP24530 442 aa11.16□□□□□ -0.62
HMHB1-201ENST00000289448 SLC35G1Q2M3R5 365 aa11.16□□□□□ -0.62
HMHB1-201ENST00000289448 FAM126BQ8IXS8 530 aa11.16□□□□□ -0.62
HMHB1-201ENST00000289448 STAG2Q8N3U4 1231 aa11.16□□□□□ -0.62
HMHB1-201ENST00000289448 SLC43A3Q8NBI5 491 aa11.16□□□□□ -0.62
HMHB1-201ENST00000289448 UBAC1Q9BSL1 405 aa11.16□□□□□ -0.62
HMHB1-201ENST00000289448 WDR11Q9BZH6 1224 aa11.16□□□□□ -0.62
HMHB1-201ENST00000289448 AP5M1Q9H0R1 490 aa11.16□□□□□ -0.62
HMHB1-201ENST00000289448 CNNM2Q9H8M5 875 aa11.16□□□□□ -0.62
HMHB1-201ENST00000289448 JMJD4Q9H9V9 463 aa11.16□□□□□ -0.62
HMHB1-201ENST00000289448 SENP2Q9HC62 589 aa11.16□□□□□ -0.62
HMHB1-201ENST00000289448 ADD3Q9UEY8 706 aaKnown RBP11.16□□□□□ -0.62
HMHB1-201ENST00000289448 Q9Y3F1 56 aa11.16□□□□□ -0.62
HMHB1-201ENST00000289448 SGSM2O43147 1006 aa11.15□□□□□ -0.62
HMHB1-201ENST00000289448 TIMP1P01033 207 aa11.15□□□□□ -0.62
HMHB1-201ENST00000289448 CD4P01730 458 aa11.15□□□□□ -0.62
HMHB1-201ENST00000289448 PARP1P09874 1014 aaKnown RBP11.15□□□□□ -0.62
HMHB1-201ENST00000289448 PSMC6P62333 389 aa11.15□□□□□ -0.62
HMHB1-201ENST00000289448 QRICH1Q2TAL8 776 aa11.15□□□□□ -0.62
HMHB1-201ENST00000289448 DUSP28Q4G0W2 176 aa11.15□□□□□ -0.62
HMHB1-201ENST00000289448 ASPRV1Q53RT3 343 aa11.15□□□□□ -0.62
HMHB1-201ENST00000289448 IFIT1BQ5T764 474 aaKnown RBP11.15□□□□□ -0.62
HMHB1-201ENST00000289448 STOX1Q6ZVD7 989 aa11.15□□□□□ -0.62
HMHB1-201ENST00000289448 C16orf59Q7L2K0 433 aa11.15□□□□□ -0.62
HMHB1-201ENST00000289448 SKAP1Q86WV1 359 aa11.15□□□□□ -0.62
HMHB1-201ENST00000289448 RGS22Q8NE09 1264 aa11.15□□□□□ -0.62
HMHB1-201ENST00000289448 VAT1LQ9HCJ6 419 aa11.15□□□□□ -0.62
HMHB1-201ENST00000289448 COL20A1Q9P218 1284 aa11.15□□□□□ -0.62
HMHB1-201ENST00000289448 PNMA2Q9UL42 364 aa11.15□□□□□ -0.62
HMHB1-201ENST00000289448 LOC102724159A0A0B4J2E5 919 aa11.14□□□□□ -0.63
HMHB1-201ENST00000289448 OPLAHO14841 1288 aa11.14□□□□□ -0.63
HMHB1-201ENST00000289448 PPP1R11O60927 126 aaPredicted RBP11.14□□□□□ -0.63
HMHB1-201ENST00000289448 CABYRO75952 493 aa11.14□□□□□ -0.63
HMHB1-201ENST00000289448 ARIH2O95376 493 aa11.14□□□□□ -0.63
HMHB1-201ENST00000289448 FPGSQ05932 587 aa11.14□□□□□ -0.63
HMHB1-201ENST00000289448 ITGA7Q13683 1181 aa11.14□□□□□ -0.63
HMHB1-201ENST00000289448 PWP2Q15269 919 aaKnown RBP11.14□□□□□ -0.63
HMHB1-201ENST00000289448 FAM109BQ6ICB4 259 aaPredicted RBP11.14□□□□□ -0.63
HMHB1-201ENST00000289448 DNERQ8NFT8 737 aa11.14□□□□□ -0.63
HMHB1-201ENST00000289448 SYTL5Q8TDW5 730 aaPredicted RBP11.14□□□□□ -0.63
HMHB1-201ENST00000289448 RUFY2Q8WXA3 655 aa11.14□□□□□ -0.63
HMHB1-201ENST00000289448 COPS5Q92905 334 aa11.14□□□□□ -0.63
HMHB1-201ENST00000289448 FAM161BQ96MY7 647 aa11.14□□□□□ -0.63
HMHB1-201ENST00000289448 GUCD1Q96NT3 240 aa11.14□□□□□ -0.63
HMHB1-201ENST00000289448 TAAR1Q96RJ0 339 aa11.14□□□□□ -0.63
HMHB1-201ENST00000289448 TRPV6Q9H1D0 765 aa11.14□□□□□ -0.63
HMHB1-201ENST00000289448 MAD2L2Q9UI95 211 aa11.14□□□□□ -0.63
HMHB1-201ENST00000289448 CHD7Q9P2D1 2997 aa11.14□□□□□ -0.63
HMHB1-201ENST00000289448 ABCB11O95342 1321 aa11.13□□□□□ -0.63
HMHB1-201ENST00000289448 MROH7Q68CQ1 1323 aa11.13□□□□□ -0.63
HMHB1-201ENST00000289448 PALM3A6NDB9 673 aaPredicted RBP11.13□□□□□ -0.63
HMHB1-201ENST00000289448 KLRF2D3W0D1 207 aa11.13□□□□□ -0.63
HMHB1-201ENST00000289448 E7EWF7 191 aa11.13□□□□□ -0.63
HMHB1-201ENST00000289448 CSF2RAP15509 400 aa11.13□□□□□ -0.63
HMHB1-201ENST00000289448 CYP2C18P33260 490 aa11.13□□□□□ -0.63
HMHB1-201ENST00000289448 PDE4DQ08499 809 aa11.13□□□□□ -0.63
HMHB1-201ENST00000289448 COL9A3Q14050 684 aaPredicted RBP11.13□□□□□ -0.63
HMHB1-201ENST00000289448 MFSD5Q6N075 450 aa11.13□□□□□ -0.63
HMHB1-201ENST00000289448 CHST3Q7LGC8 479 aa11.13□□□□□ -0.63
HMHB1-201ENST00000289448 FBXO11Q86XK2 927 aa11.13□□□□□ -0.63
HMHB1-201ENST00000289448 MAP4K1Q92918 833 aa11.13□□□□□ -0.63
HMHB1-201ENST00000289448 MTMR8Q96EF0 704 aa11.13□□□□□ -0.63
HMHB1-201ENST00000289448 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.13□□□□□ -0.63
HMHB1-201ENST00000289448 PPP1R12CQ9BZL4 782 aa11.13□□□□□ -0.63
HMHB1-201ENST00000289448 STXBP5LQ9Y2K9 1186 aa11.13□□□□□ -0.63
HMHB1-201ENST00000289448 U3KPZ7 1027 aaPredicted RBP11.13□□□□□ -0.63
HMHB1-201ENST00000289448 UMODL1Q5DID0 1318 aa11.12□□□□□ -0.63
HMHB1-201ENST00000289448 BAZ2BQ9UIF8 2168 aaKnown RBP11.12□□□□□ -0.63
HMHB1-201ENST00000289448 IFIT3O14879 490 aaKnown RBP11.12□□□□□ -0.63
HMHB1-201ENST00000289448 DHX16O60231 1041 aaKnown RBP11.12□□□□□ -0.63
HMHB1-201ENST00000289448 ZEB2O60315 1214 aa11.12□□□□□ -0.63
HMHB1-201ENST00000289448 B4GALT4O60513 344 aa11.12□□□□□ -0.63
HMHB1-201ENST00000289448 ANTXR2P58335 489 aa11.12□□□□□ -0.63
HMHB1-201ENST00000289448 SMAD3P84022 425 aaKnown RBP11.12□□□□□ -0.63
HMHB1-201ENST00000289448 PURAQ00577 322 aaKnown RBP11.12□□□□□ -0.63
HMHB1-201ENST00000289448 TRDNQ13061 729 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms