RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 EFCC1Q9HA90 598 aa16.78■□□□□ 0.28
SHROOM4-201ENST00000289292 PCDHA13Q9Y5I0 950 aa16.78■□□□□ 0.28
SHROOM4-201ENST00000289292 PRDM15P57071 1507 aaPredicted RBP16.78■□□□□ 0.28
SHROOM4-201ENST00000289292 PLTPP55058 493 aa16.78■□□□□ 0.28
SHROOM4-201ENST00000289292 MIER3Q7Z3K6 550 aa16.78■□□□□ 0.28
SHROOM4-201ENST00000289292 FAM26FQ5R3K3 315 aa16.77■□□□□ 0.28
SHROOM4-201ENST00000289292 NSMFQ6X4W1 530 aa16.77■□□□□ 0.28
SHROOM4-201ENST00000289292 COPRSQ9NQ92 184 aa16.77■□□□□ 0.28
SHROOM4-201ENST00000289292 USP40Q9NVE5 1235 aa16.77■□□□□ 0.28
SHROOM4-201ENST00000289292 NDUFA10O95299 355 aa16.77■□□□□ 0.28
SHROOM4-201ENST00000289292 NXNQ6DKJ4 435 aa16.77■□□□□ 0.28
SHROOM4-201ENST00000289292 ZBTB22O15209 634 aa16.77■□□□□ 0.27
SHROOM4-201ENST00000289292 SASH1O94885 1247 aa16.77■□□□□ 0.27
SHROOM4-201ENST00000289292 PDE6CP51160 858 aa16.77■□□□□ 0.27
SHROOM4-201ENST00000289292 SCYL2Q6P3W7 929 aa16.77■□□□□ 0.27
SHROOM4-201ENST00000289292 CCDC127Q96BQ5 260 aa16.77■□□□□ 0.27
SHROOM4-201ENST00000289292 CYP2D7A0A087X1C5 515 aa16.77■□□□□ 0.27
SHROOM4-201ENST00000289292 SH2D4BQ5SQS7 431 aa16.77■□□□□ 0.27
SHROOM4-201ENST00000289292 TBK1Q9UHD2 729 aa16.77■□□□□ 0.27
SHROOM4-201ENST00000289292 PCDHA4Q9UN74 947 aa16.77■□□□□ 0.27
SHROOM4-201ENST00000289292 A0A087WUV0 522 aaPredicted RBP16.77■□□□□ 0.27
SHROOM4-201ENST00000289292 CLIC2O15247 247 aa16.77■□□□□ 0.27
SHROOM4-201ENST00000289292 OTUD6AQ7L8S5 288 aa16.77■□□□□ 0.27
SHROOM4-201ENST00000289292 LCORLQ8N3X6 602 aa16.77■□□□□ 0.27
SHROOM4-201ENST00000289292 MAIP1Q8WWC4 291 aa16.77■□□□□ 0.27
SHROOM4-201ENST00000289292 EXOC4Q96A65 974 aa16.77■□□□□ 0.27
SHROOM4-201ENST00000289292 NUF2Q9BZD4 464 aa16.77■□□□□ 0.27
SHROOM4-201ENST00000289292 STK24Q9Y6E0 443 aa16.77■□□□□ 0.27
SHROOM4-201ENST00000289292 STK10O94804 968 aaKnown RBP16.76■□□□□ 0.27
SHROOM4-201ENST00000289292 GTF2IP78347 998 aa16.76■□□□□ 0.27
SHROOM4-201ENST00000289292 GRK7Q8WTQ7 553 aa16.76■□□□□ 0.27
SHROOM4-201ENST00000289292 ZCCHC17Q9NP64 241 aaKnown RBP16.76■□□□□ 0.27
SHROOM4-201ENST00000289292 ATP8A2Q9NTI2 1148 aa16.76■□□□□ 0.27
SHROOM4-201ENST00000289292 GLT8D2Q9H1C3 349 aa16.76■□□□□ 0.27
SHROOM4-201ENST00000289292 NOVA2Q9UNW9 492 aaKnown RBP16.76■□□□□ 0.27
SHROOM4-201ENST00000289292 PTCH1Q13635 1447 aa16.76■□□□□ 0.27
SHROOM4-201ENST00000289292 SCNN1DP51172 638 aa16.76■□□□□ 0.27
SHROOM4-201ENST00000289292 UBXN2AP68543 259 aa16.76■□□□□ 0.27
SHROOM4-201ENST00000289292 PPP2R5AQ15172 486 aa16.76■□□□□ 0.27
SHROOM4-201ENST00000289292 DHX40Q8IX18 779 aaKnown RBP16.76■□□□□ 0.27
SHROOM4-201ENST00000289292 P3H4Q92791 437 aa16.76■□□□□ 0.27
SHROOM4-201ENST00000289292 RWDD2AQ9UIY3 292 aa16.76■□□□□ 0.27
SHROOM4-201ENST00000289292 HSPA2P54652 639 aa16.76■□□□□ 0.27
SHROOM4-201ENST00000289292 MYL7Q01449 175 aa16.76■□□□□ 0.27
SHROOM4-201ENST00000289292 TRIP13Q15645 432 aaPredicted RBP16.76■□□□□ 0.27
SHROOM4-201ENST00000289292 CFAP61Q8NHU2 1237 aa16.76■□□□□ 0.27
SHROOM4-201ENST00000289292 MAGOHBQ96A72 148 aaKnown RBP16.76■□□□□ 0.27
SHROOM4-201ENST00000289292 TBX22Q9Y458 520 aa16.76■□□□□ 0.27
SHROOM4-201ENST00000289292 CCDC151A5D8V7 595 aa16.75■□□□□ 0.27
SHROOM4-201ENST00000289292 MYO1CO00159 1063 aa16.75■□□□□ 0.27
SHROOM4-201ENST00000289292 LRRN2O75325 713 aa16.75■□□□□ 0.27
SHROOM4-201ENST00000289292 LGSNQ5TDP6 509 aa16.75■□□□□ 0.27
SHROOM4-201ENST00000289292 LRRC8CQ8TDW0 803 aa16.75■□□□□ 0.27
SHROOM4-201ENST00000289292 MEIS1O00470 390 aa16.75■□□□□ 0.27
SHROOM4-201ENST00000289292 PRR29P0C7W0 189 aa16.75■□□□□ 0.27
SHROOM4-201ENST00000289292 HMGB2P26583 209 aaKnown RBP16.75■□□□□ 0.27
SHROOM4-201ENST00000289292 TCP11X2Q5H9J9 407 aa16.75■□□□□ 0.27
SHROOM4-201ENST00000289292 NFU1Q9UMS0 254 aa16.75■□□□□ 0.27
SHROOM4-201ENST00000289292 CLASP1Q7Z460 1538 aa16.75■□□□□ 0.27
SHROOM4-201ENST00000289292 PRKG1Q13976 671 aa16.75■□□□□ 0.27
SHROOM4-201ENST00000289292 SH2D4AQ9H788 454 aa16.75■□□□□ 0.27
SHROOM4-201ENST00000289292 ADD2P35612 726 aa16.75■□□□□ 0.27
SHROOM4-201ENST00000289292 COG7P83436 770 aa16.75■□□□□ 0.27
SHROOM4-201ENST00000289292 KRT31Q15323 416 aa16.75■□□□□ 0.27
SHROOM4-201ENST00000289292 TTBK2Q6IQ55 1244 aa16.75■□□□□ 0.27
SHROOM4-201ENST00000289292 LARP4BQ92615 738 aaKnown RBP16.75■□□□□ 0.27
SHROOM4-201ENST00000289292 SEPT10Q9P0V9 454 aa16.75■□□□□ 0.27
SHROOM4-201ENST00000289292 GJA3Q9Y6H8 435 aa16.75■□□□□ 0.27
SHROOM4-201ENST00000289292 PRPF6O94906 941 aaKnown RBP16.75■□□□□ 0.27
SHROOM4-201ENST00000289292 ZWINTO95229 277 aa16.75■□□□□ 0.27
SHROOM4-201ENST00000289292 PABPC4Q13310 644 aaKnown RBP eCLIP16.75■□□□□ 0.27
SHROOM4-201ENST00000289292 RCN2Q14257 317 aa16.75■□□□□ 0.27
SHROOM4-201ENST00000289292 KRT81Q14533 505 aa16.75■□□□□ 0.27
SHROOM4-201ENST00000289292 TMED2Q15363 201 aa16.75■□□□□ 0.27
SHROOM4-201ENST00000289292 LRRC43Q8N309 656 aa16.75■□□□□ 0.27
SHROOM4-201ENST00000289292 LRRD1A4D1F6 860 aa16.74■□□□□ 0.27
SHROOM4-201ENST00000289292 BTDP43251 543 aa16.74■□□□□ 0.27
SHROOM4-201ENST00000289292 GRM1Q13255 1194 aa16.74■□□□□ 0.27
SHROOM4-201ENST00000289292 ENOX1Q8TC92 643 aaKnown RBP16.74■□□□□ 0.27
SHROOM4-201ENST00000289292 SPATS2LQ9NUQ6 558 aaKnown RBP16.74■□□□□ 0.27
SHROOM4-201ENST00000289292 ZSWIM5Q9P217 1185 aa16.74■□□□□ 0.27
SHROOM4-201ENST00000289292 DHX9Q08211 1270 aaKnown RBP16.74■□□□□ 0.27
SHROOM4-201ENST00000289292 MFSD14BQ5SR56 506 aa16.74■□□□□ 0.27
SHROOM4-201ENST00000289292 FAM178BQ8IXR5 827 aa16.74■□□□□ 0.27
SHROOM4-201ENST00000289292 KCNF1Q9H3M0 494 aa16.74■□□□□ 0.27
SHROOM4-201ENST00000289292 RIC8AQ9NPQ8 531 aa16.74■□□□□ 0.27
SHROOM4-201ENST00000289292 PLEKHG3A1L390 1219 aa16.74■□□□□ 0.27
SHROOM4-201ENST00000289292 NR2F2P24468 414 aa16.74■□□□□ 0.27
SHROOM4-201ENST00000289292 PANX2Q96RD6 677 aa16.74■□□□□ 0.27
SHROOM4-201ENST00000289292 PASKQ96RG2 1323 aa16.74■□□□□ 0.27
SHROOM4-201ENST00000289292 TESPA1A2RU30 521 aaPredicted RBP16.74■□□□□ 0.27
SHROOM4-201ENST00000289292 SH3BP5O60239 455 aa16.74■□□□□ 0.27
SHROOM4-201ENST00000289292 GFPT2O94808 682 aa16.74■□□□□ 0.27
SHROOM4-201ENST00000289292 PHBP35232 272 aa16.74■□□□□ 0.27
SHROOM4-201ENST00000289292 UBE3CQ15386 1083 aa16.74■□□□□ 0.27
SHROOM4-201ENST00000289292 RASIP1Q5U651 963 aa16.74■□□□□ 0.27
SHROOM4-201ENST00000289292 DNAJC17Q9NVM6 304 aaKnown RBP16.74■□□□□ 0.27
SHROOM4-201ENST00000289292 CTNND1O60716 968 aaKnown RBP16.74■□□□□ 0.27
SHROOM4-201ENST00000289292 MFAP3LO75121 409 aa16.74■□□□□ 0.27
SHROOM4-201ENST00000289292 STAM2O75886 525 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms