RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 BPIFA3Q9BQP9 254 aa13.84□□□□□ -0.19
SLC6A1-201ENST00000287766 KLHL30Q0D2K2 578 aa13.84□□□□□ -0.19
SLC6A1-201ENST00000287766 TNIP1Q15025 636 aa13.84□□□□□ -0.19
SLC6A1-201ENST00000287766 TSNAXIP1Q2TAA8 658 aa13.84□□□□□ -0.19
SLC6A1-201ENST00000287766 SLC9C1Q4G0N8 1177 aa13.84□□□□□ -0.19
SLC6A1-201ENST00000287766 ZNF658Q5TYW1 1059 aaPredicted RBP13.84□□□□□ -0.19
SLC6A1-201ENST00000287766 SMCR8Q8TEV9 937 aaPredicted RBP13.84□□□□□ -0.19
SLC6A1-201ENST00000287766 POLD4Q9HCU8 107 aa13.84□□□□□ -0.19
SLC6A1-201ENST00000287766 DCP1AQ9NPI6 582 aaPredicted RBP13.84□□□□□ -0.19
SLC6A1-201ENST00000287766 USP40Q9NVE5 1235 aa13.84□□□□□ -0.19
SLC6A1-201ENST00000287766 DDX39AO00148 427 aaKnown RBP13.84□□□□□ -0.19
SLC6A1-201ENST00000287766 CETN3O15182 167 aa13.84□□□□□ -0.19
SLC6A1-201ENST00000287766 PRCPP42785 496 aa13.84□□□□□ -0.19
SLC6A1-201ENST00000287766 CYP4A11Q02928 519 aa13.84□□□□□ -0.19
SLC6A1-201ENST00000287766 RUFY4Q6ZNE9 571 aa13.84□□□□□ -0.19
SLC6A1-201ENST00000287766 STAG2Q8N3U4 1231 aa13.84□□□□□ -0.19
SLC6A1-201ENST00000287766 HAUS4Q9H6D7 363 aa13.84□□□□□ -0.19
SLC6A1-201ENST00000287766 PCDHB13Q9Y5F0 798 aa13.84□□□□□ -0.19
SLC6A1-201ENST00000287766 CEP104O60308 925 aa13.83□□□□□ -0.19
SLC6A1-201ENST00000287766 RFC1P35251 1148 aaPredicted RBP13.83□□□□□ -0.19
SLC6A1-201ENST00000287766 CALCOCO2Q13137 446 aa13.83□□□□□ -0.19
SLC6A1-201ENST00000287766 SH3RF3Q8TEJ3 882 aaPredicted RBP13.83□□□□□ -0.19
SLC6A1-201ENST00000287766 SPATS2LQ9NUQ6 558 aaKnown RBP13.83□□□□□ -0.19
SLC6A1-201ENST00000287766 PCDHA12Q9UN75 941 aa13.83□□□□□ -0.19
SLC6A1-201ENST00000287766 TOM1O60784 492 aa13.83□□□□□ -0.2
SLC6A1-201ENST00000287766 IFT88Q13099 833 aa13.83□□□□□ -0.2
SLC6A1-201ENST00000287766 SRBD1Q8N5C6 995 aaKnown RBP13.83□□□□□ -0.2
SLC6A1-201ENST00000287766 RAB3IL1Q8TBN0 382 aa13.83□□□□□ -0.2
SLC6A1-201ENST00000287766 NOX5Q96PH1 765 aa13.83□□□□□ -0.2
SLC6A1-201ENST00000287766 ALX1Q15699 326 aa13.83□□□□□ -0.2
SLC6A1-201ENST00000287766 RBM43Q6ZSC3 357 aaKnown RBP13.83□□□□□ -0.2
SLC6A1-201ENST00000287766 KIAA0825Q8IV33 1275 aa13.83□□□□□ -0.2
SLC6A1-201ENST00000287766 RBM17Q96I25 401 aaKnown RBP13.83□□□□□ -0.2
SLC6A1-201ENST00000287766 LSM14BQ9BX40 385 aaKnown RBP13.83□□□□□ -0.2
SLC6A1-201ENST00000287766 TPX2Q9ULW0 747 aaKnown RBP13.83□□□□□ -0.2
SLC6A1-201ENST00000287766 POLR2FP61218 127 aaKnown RBP13.83□□□□□ -0.2
SLC6A1-201ENST00000287766 TCP11X2Q5H9J9 407 aa13.83□□□□□ -0.2
SLC6A1-201ENST00000287766 KCTD1Q719H9 257 aa13.83□□□□□ -0.2
SLC6A1-201ENST00000287766 LMBR1Q8WVP7 490 aa13.83□□□□□ -0.2
SLC6A1-201ENST00000287766 FAM84BQ96KN1 310 aaPredicted RBP13.83□□□□□ -0.2
SLC6A1-201ENST00000287766 TSGA10Q9BZW7 698 aa13.83□□□□□ -0.2
SLC6A1-201ENST00000287766 NDUFA10O95299 355 aa13.82□□□□□ -0.2
SLC6A1-201ENST00000287766 RASSF7Q02833 373 aa13.82□□□□□ -0.2
SLC6A1-201ENST00000287766 RBBP5Q15291 538 aaKnown RBP13.82□□□□□ -0.2
SLC6A1-201ENST00000287766 GSTA5Q7RTV2 222 aa13.82□□□□□ -0.2
SLC6A1-201ENST00000287766 GPBP1Q86WP2 473 aa13.82□□□□□ -0.2
SLC6A1-201ENST00000287766 ANKRD7Q92527 254 aa13.82□□□□□ -0.2
SLC6A1-201ENST00000287766 HPS3Q969F9 1004 aa13.82□□□□□ -0.2
SLC6A1-201ENST00000287766 ABCB6Q9NP58 842 aa13.82□□□□□ -0.2
SLC6A1-201ENST00000287766 TCHHQ07283 1943 aa13.82□□□□□ -0.2
SLC6A1-201ENST00000287766 A0A087WUV0 522 aaPredicted RBP13.82□□□□□ -0.2
SLC6A1-201ENST00000287766 UBE2SQ16763 222 aa13.82□□□□□ -0.2
SLC6A1-201ENST00000287766 HS2ST1Q7LGA3 356 aa13.82□□□□□ -0.2
SLC6A1-201ENST00000287766 CCDC84Q86UT8 332 aaPredicted RBP13.82□□□□□ -0.2
SLC6A1-201ENST00000287766 FNBP4Q8N3X1 1017 aaPredicted RBP13.82□□□□□ -0.2
SLC6A1-201ENST00000287766 VCXQ9H320 206 aa13.82□□□□□ -0.2
SLC6A1-201ENST00000287766 BSDC1Q9NW68 430 aaPredicted RBP13.82□□□□□ -0.2
SLC6A1-201ENST00000287766 HDAC6Q9UBN7 1215 aa13.82□□□□□ -0.2
SLC6A1-201ENST00000287766 STK36Q9NRP7 1315 aa13.82□□□□□ -0.2
SLC6A1-201ENST00000287766 CFBP00751 764 aa13.82□□□□□ -0.2
SLC6A1-201ENST00000287766 ZNF131P52739 623 aa13.82□□□□□ -0.2
SLC6A1-201ENST00000287766 IRX5P78411 483 aaPredicted RBP13.82□□□□□ -0.2
SLC6A1-201ENST00000287766 PRR16Q569H4 304 aa13.82□□□□□ -0.2
SLC6A1-201ENST00000287766 RBM26Q5T8P6 1007 aaKnown RBP13.82□□□□□ -0.2
SLC6A1-201ENST00000287766 KSR1Q8IVT5 923 aa13.82□□□□□ -0.2
SLC6A1-201ENST00000287766 CCDC63Q8NA47 563 aa13.82□□□□□ -0.2
SLC6A1-201ENST00000287766 FAM71BQ8TC56 605 aa13.82□□□□□ -0.2
SLC6A1-201ENST00000287766 P2RX5Q93086 422 aa13.82□□□□□ -0.2
SLC6A1-201ENST00000287766 LRRC45Q96CN5 670 aa13.82□□□□□ -0.2
SLC6A1-201ENST00000287766 SWAP70Q9UH65 585 aa13.82□□□□□ -0.2
SLC6A1-201ENST00000287766 WDR19Q8NEZ3 1342 aa13.82□□□□□ -0.2
SLC6A1-201ENST00000287766 ASIC2Q16515 512 aa13.82□□□□□ -0.2
SLC6A1-201ENST00000287766 TBC1D9BQ66K14 1250 aa13.82□□□□□ -0.2
SLC6A1-201ENST00000287766 FAM196AQ6ZSG2 479 aa13.82□□□□□ -0.2
SLC6A1-201ENST00000287766 EFCAB13Q8IY85 973 aa13.82□□□□□ -0.2
SLC6A1-201ENST00000287766 MYOCDQ8IZQ8 938 aa13.82□□□□□ -0.2
SLC6A1-201ENST00000287766 PSTPIP2Q9H939 334 aa13.82□□□□□ -0.2
SLC6A1-201ENST00000287766 MRPL44Q9H9J2 332 aaKnown RBP13.82□□□□□ -0.2
SLC6A1-201ENST00000287766 MED4Q9NPJ6 270 aa13.82□□□□□ -0.2
SLC6A1-201ENST00000287766 DISC1Q9NRI5 854 aa13.82□□□□□ -0.2
SLC6A1-201ENST00000287766 RWDD2AQ9UIY3 292 aa13.82□□□□□ -0.2
SLC6A1-201ENST00000287766 TUBE1Q9UJT0 475 aa13.82□□□□□ -0.2
SLC6A1-201ENST00000287766 ADGRG1Q9Y653 693 aa13.82□□□□□ -0.2
SLC6A1-201ENST00000287766 ABCC12Q96J65 1359 aa13.81□□□□□ -0.2
SLC6A1-201ENST00000287766 RIMBP3CA6NJZ7 1639 aa13.81□□□□□ -0.2
SLC6A1-201ENST00000287766 RIMBP3BA6NNM3 1639 aa13.81□□□□□ -0.2
SLC6A1-201ENST00000287766 RIMBP3Q9UFD9 1639 aa13.81□□□□□ -0.2
SLC6A1-201ENST00000287766 SMIM22K7EJ46 135 aa13.81□□□□□ -0.2
SLC6A1-201ENST00000287766 TRAPPC10P48553 1259 aa13.81□□□□□ -0.2
SLC6A1-201ENST00000287766 PAK2Q13177 524 aa13.81□□□□□ -0.2
SLC6A1-201ENST00000287766 SFMBT2Q5VUG0 894 aa13.81□□□□□ -0.2
SLC6A1-201ENST00000287766 TBC1D5Q92609 795 aa13.81□□□□□ -0.2
SLC6A1-201ENST00000287766 PANX2Q96RD6 677 aa13.81□□□□□ -0.2
SLC6A1-201ENST00000287766 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.81□□□□□ -0.2
SLC6A1-201ENST00000287766 VIRMAQ69YN4 1812 aaKnown RBP13.81□□□□□ -0.2
SLC6A1-201ENST00000287766 TXNDC9O14530 226 aa13.81□□□□□ -0.2
SLC6A1-201ENST00000287766 GCNT3O95395 438 aa13.81□□□□□ -0.2
SLC6A1-201ENST00000287766 ADAT2Q7Z6V5 191 aaKnown RBP13.81□□□□□ -0.2
SLC6A1-201ENST00000287766 CCDC26Q8TAB7 109 aa13.81□□□□□ -0.2
SLC6A1-201ENST00000287766 ZBTB12Q9Y330 459 aaPredicted RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms