RNA–Protein interactions for RNA: ENST00000287600.8

PDE6D-201, Transcript of phosphodiesterase 6D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6D, Length 1,175 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-201ENST00000287600 FBXO16Q8IX29 292 aaPredicted RBP17.85■□□□□ 0.45
PDE6D-201ENST00000287600 FAM126BQ8IXS8 530 aa17.85■□□□□ 0.45
PDE6D-201ENST00000287600 ZKSCAN3Q9BRR0 538 aa17.85■□□□□ 0.45
PDE6D-201ENST00000287600 PPP1R12CQ9BZL4 782 aa17.85■□□□□ 0.45
PDE6D-201ENST00000287600 KRT23Q9C075 422 aa17.85■□□□□ 0.45
PDE6D-201ENST00000287600 CYP39A1Q9NYL5 469 aa17.85■□□□□ 0.45
PDE6D-201ENST00000287600 ASTN1O14525 1302 aa17.84■□□□□ 0.45
PDE6D-201ENST00000287600 CTAGE5O15320 804 aa17.84■□□□□ 0.45
PDE6D-201ENST00000287600 ICAM1P05362 532 aa17.84■□□□□ 0.45
PDE6D-201ENST00000287600 DNAJB2P25686 324 aa17.84■□□□□ 0.45
PDE6D-201ENST00000287600 NOVP48745 357 aa17.84■□□□□ 0.45
PDE6D-201ENST00000287600 NT5C2P49902 561 aa17.84■□□□□ 0.45
PDE6D-201ENST00000287600 CXCL17Q6UXB2 119 aa17.84■□□□□ 0.45
PDE6D-201ENST00000287600 EEPD1Q7L9B9 569 aa17.84■□□□□ 0.45
PDE6D-201ENST00000287600 TMEM199Q8N511 208 aa17.84■□□□□ 0.45
PDE6D-201ENST00000287600 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.84■□□□□ 0.45
PDE6D-201ENST00000287600 COL25A1Q9BXS0 654 aaPredicted RBP17.84■□□□□ 0.45
PDE6D-201ENST00000287600 LSG1Q9H089 658 aaKnown RBP17.84■□□□□ 0.45
PDE6D-201ENST00000287600 AP5M1Q9H0R1 490 aa17.84■□□□□ 0.45
PDE6D-201ENST00000287600 CNNM2Q9H8M5 875 aa17.84■□□□□ 0.45
PDE6D-201ENST00000287600 ANO2Q9NQ90 1003 aa17.84■□□□□ 0.45
PDE6D-201ENST00000287600 RBM8AQ9Y5S9 174 aaKnown RBP17.84■□□□□ 0.45
PDE6D-201ENST00000287600 DDX49Q9Y6V7 483 aaKnown RBP17.84■□□□□ 0.45
PDE6D-201ENST00000287600 FRMPD2Q68DX3 1309 aaPredicted RBP17.83■□□□□ 0.44
PDE6D-201ENST00000287600 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.83■□□□□ 0.44
PDE6D-201ENST00000287600 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.83■□□□□ 0.44
PDE6D-201ENST00000287600 PRR29P0C7W0 189 aa17.83■□□□□ 0.44
PDE6D-201ENST00000287600 TOP1P11387 765 aaKnown RBP17.83■□□□□ 0.44
PDE6D-201ENST00000287600 CSF2RAP15509 400 aa17.83■□□□□ 0.44
PDE6D-201ENST00000287600 NKX3-2P78367 333 aa17.83■□□□□ 0.44
PDE6D-201ENST00000287600 IQCA1Q86XH1 822 aa17.83■□□□□ 0.44
PDE6D-201ENST00000287600 TTC14Q96N46 770 aa17.83■□□□□ 0.44
PDE6D-201ENST00000287600 TMEM47Q9BQJ4 181 aa17.83■□□□□ 0.44
PDE6D-201ENST00000287600 RANBP17Q9H2T7 1088 aaKnown RBP17.83■□□□□ 0.44
PDE6D-201ENST00000287600 ZSWIM5Q9P217 1185 aa17.83■□□□□ 0.44
PDE6D-201ENST00000287600 GNEQ9Y223 722 aaKnown RBP17.83■□□□□ 0.44
PDE6D-201ENST00000287600 ZEB2O60315 1214 aa17.82■□□□□ 0.44
PDE6D-201ENST00000287600 CABYRO75952 493 aa17.82■□□□□ 0.44
PDE6D-201ENST00000287600 SMPD1P17405 629 aa17.82■□□□□ 0.44
PDE6D-201ENST00000287600 PTGS1P23219 599 aa17.82■□□□□ 0.44
PDE6D-201ENST00000287600 SLC16A2P36021 539 aa17.82■□□□□ 0.44
PDE6D-201ENST00000287600 TRDNQ13061 729 aa17.82■□□□□ 0.44
PDE6D-201ENST00000287600 FSCN1Q16658 493 aaKnown RBP17.82■□□□□ 0.44
PDE6D-201ENST00000287600 SYDE2Q5VT97 1194 aa17.82■□□□□ 0.44
PDE6D-201ENST00000287600 TTBK2Q6IQ55 1244 aa17.82■□□□□ 0.44
PDE6D-201ENST00000287600 PSRC1Q6PGN9 363 aaPredicted RBP17.82■□□□□ 0.44
PDE6D-201ENST00000287600 ZSCAN10Q96SZ4 725 aaPredicted RBP17.82■□□□□ 0.44
PDE6D-201ENST00000287600 VTA1Q9NP79 307 aa17.82■□□□□ 0.44
PDE6D-201ENST00000287600 GPCPD1Q9NPB8 672 aa17.82■□□□□ 0.44
PDE6D-201ENST00000287600 TAF6LQ9Y6J9 622 aa17.82■□□□□ 0.44
PDE6D-201ENST00000287600 CDH23Q9H251 3354 aa17.82■□□□□ 0.44
PDE6D-201ENST00000287600 UNC80Q8N2C7 3258 aa17.82■□□□□ 0.44
PDE6D-201ENST00000287600 DYNC1LI2O43237 492 aaPredicted RBP17.81■□□□□ 0.44
PDE6D-201ENST00000287600 CCDC178Q5BJE1 867 aa17.81■□□□□ 0.44
PDE6D-201ENST00000287600 DGKHQ86XP1 1220 aa17.81■□□□□ 0.44
PDE6D-201ENST00000287600 TIFAQ96CG3 184 aa17.81■□□□□ 0.44
PDE6D-201ENST00000287600 PURBQ96QR8 312 aaKnown RBP17.81■□□□□ 0.44
PDE6D-201ENST00000287600 PDGFCQ9NRA1 345 aa17.81■□□□□ 0.44
PDE6D-201ENST00000287600 PTPDC1A2A3K4 754 aa17.8■□□□□ 0.44
PDE6D-201ENST00000287600 E7EWF7 191 aa17.8■□□□□ 0.44
PDE6D-201ENST00000287600 CD4P01730 458 aa17.8■□□□□ 0.44
PDE6D-201ENST00000287600 ACRP10323 421 aa17.8■□□□□ 0.44
PDE6D-201ENST00000287600 CYP2C18P33260 490 aa17.8■□□□□ 0.44
PDE6D-201ENST00000287600 ITGA7Q13683 1181 aa17.8■□□□□ 0.44
PDE6D-201ENST00000287600 BAATQ14032 418 aaPredicted RBP17.8■□□□□ 0.44
PDE6D-201ENST00000287600 TMEM240Q5SV17 173 aa17.8■□□□□ 0.44
PDE6D-201ENST00000287600 IQSEC1Q6DN90 963 aa17.8■□□□□ 0.44
PDE6D-201ENST00000287600 TAPT1Q6NXT6 567 aa17.8■□□□□ 0.44
PDE6D-201ENST00000287600 RALYLQ86SE5 291 aaKnown RBP17.8■□□□□ 0.44
PDE6D-201ENST00000287600 UBAC1Q9BSL1 405 aa17.8■□□□□ 0.44
PDE6D-201ENST00000287600 HIPK3Q9H422 1215 aa17.8■□□□□ 0.44
PDE6D-201ENST00000287600 ADD3Q9UEY8 706 aaKnown RBP17.8■□□□□ 0.44
PDE6D-201ENST00000287600 TNKSO95271 1327 aa17.79■□□□□ 0.44
PDE6D-201ENST00000287600 NFIBO00712 420 aa17.79■□□□□ 0.44
PDE6D-201ENST00000287600 ALDH5A1P51649 535 aaPredicted RBP17.79■□□□□ 0.44
PDE6D-201ENST00000287600 GRIN2CQ14957 1233 aa17.79■□□□□ 0.44
PDE6D-201ENST00000287600 BTNL9Q6UXG8 535 aa17.79■□□□□ 0.44
PDE6D-201ENST00000287600 STOX1Q6ZVD7 989 aa17.79■□□□□ 0.44
PDE6D-201ENST00000287600 ZNF365Q70YC5 407 aa17.79■□□□□ 0.44
PDE6D-201ENST00000287600 CYB5R4Q7L1T6 521 aa17.79■□□□□ 0.44
PDE6D-201ENST00000287600 C16orf59Q7L2K0 433 aa17.79■□□□□ 0.44
PDE6D-201ENST00000287600 SLC43A3Q8NBI5 491 aa17.79■□□□□ 0.44
PDE6D-201ENST00000287600 NCOA7Q8NI08 942 aa17.79■□□□□ 0.44
PDE6D-201ENST00000287600 LAMA4Q16363 1823 aa17.79■□□□□ 0.44
PDE6D-201ENST00000287600 SLC27A2O14975 620 aa17.78■□□□□ 0.44
PDE6D-201ENST00000287600 PDHBP11177 359 aa17.78■□□□□ 0.44
PDE6D-201ENST00000287600 PSMC6P62333 389 aa17.78■□□□□ 0.44
PDE6D-201ENST00000287600 NECTIN1Q15223 517 aa17.78■□□□□ 0.44
PDE6D-201ENST00000287600 TMEM63BQ5T3F8 832 aa17.78■□□□□ 0.44
PDE6D-201ENST00000287600 SLC30A10Q6XR72 485 aa17.78■□□□□ 0.44
PDE6D-201ENST00000287600 ENAHQ8N8S7 591 aaPredicted RBP17.78■□□□□ 0.44
PDE6D-201ENST00000287600 MORC4Q8TE76 937 aa17.78■□□□□ 0.44
PDE6D-201ENST00000287600 ANKS1AQ92625 1134 aa17.78■□□□□ 0.44
PDE6D-201ENST00000287600 MTIF3Q9H2K0 278 aaKnown RBP17.78■□□□□ 0.44
PDE6D-201ENST00000287600 ZNF576Q9H609 170 aa17.78■□□□□ 0.44
PDE6D-201ENST00000287600 KAT14Q9H8E8 782 aa17.78■□□□□ 0.44
PDE6D-201ENST00000287600 IL23AQ9NPF7 189 aa17.78■□□□□ 0.44
PDE6D-201ENST00000287600 Q9Y3F1 56 aa17.78■□□□□ 0.44
PDE6D-201ENST00000287600 GRXCR1A8MXD5 290 aa17.77■□□□□ 0.44
PDE6D-201ENST00000287600 B4GALT4O60513 344 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms