RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 FAM205CA6NFA0 338 aa25■■□□□ 1.59
PDLIM3-203ENST00000284771 PIK3CDO00329 1044 aa25■■□□□ 1.59
PDLIM3-203ENST00000284771 SLC25A27O95847 323 aa25■■□□□ 1.59
PDLIM3-203ENST00000284771 F13A1P00488 732 aa25■■□□□ 1.59
PDLIM3-203ENST00000284771 HSD17B4P51659 736 aa25■■□□□ 1.59
PDLIM3-203ENST00000284771 SAFBQ15424 915 aaKnown RBP eCLIP25■■□□□ 1.59
PDLIM3-203ENST00000284771 FAM173BQ6P4H8 233 aa25■■□□□ 1.59
PDLIM3-203ENST00000284771 DNAJC5GQ8N7S2 189 aa25■■□□□ 1.59
PDLIM3-203ENST00000284771 COL20A1Q9P218 1284 aa25■■□□□ 1.59
PDLIM3-203ENST00000284771 TRPA1O75762 1119 aa24.99■■□□□ 1.59
PDLIM3-203ENST00000284771 TBC1D8O95759 1140 aa24.99■■□□□ 1.59
PDLIM3-203ENST00000284771 RPS6P62753 249 aaKnown RBP24.99■■□□□ 1.59
PDLIM3-203ENST00000284771 JAKMIP3Q5VZ66 844 aa24.99■■□□□ 1.59
PDLIM3-203ENST00000284771 REXO1Q8N1G1 1221 aaKnown RBP24.99■■□□□ 1.59
PDLIM3-203ENST00000284771 PGBD1Q96JS3 809 aa24.99■■□□□ 1.59
PDLIM3-203ENST00000284771 A1CFQ9NQ94 594 aaKnown RBP24.99■■□□□ 1.59
PDLIM3-203ENST00000284771 NSMFQ6X4W1 530 aa24.98■■□□□ 1.59
PDLIM3-203ENST00000284771 MCF2L2Q86YR7 1114 aa24.98■■□□□ 1.59
PDLIM3-203ENST00000284771 NOSTRINQ8IVI9 506 aa24.98■■□□□ 1.59
PDLIM3-203ENST00000284771 SHCBP1Q8NEM2 672 aa24.98■■□□□ 1.59
PDLIM3-203ENST00000284771 BICD2Q8TD16 824 aa24.98■■□□□ 1.59
PDLIM3-203ENST00000284771 PURBQ96QR8 312 aaKnown RBP24.98■■□□□ 1.59
PDLIM3-203ENST00000284771 GCOM1H8Y6P7 765 aaPredicted RBP24.97■■□□□ 1.59
PDLIM3-203ENST00000284771 POLR2MP0CAP2 368 aa24.97■■□□□ 1.59
PDLIM3-203ENST00000284771 BAATQ14032 418 aaPredicted RBP24.97■■□□□ 1.59
PDLIM3-203ENST00000284771 SLC30A10Q6XR72 485 aa24.97■■□□□ 1.59
PDLIM3-203ENST00000284771 CHAMP1Q96JM3 812 aa24.97■■□□□ 1.59
PDLIM3-203ENST00000284771 CFHR5Q9BXR6 569 aa24.97■■□□□ 1.59
PDLIM3-203ENST00000284771 GLT8D2Q9H1C3 349 aa24.97■■□□□ 1.59
PDLIM3-203ENST00000284771 MROH8Q9H579 483 aa24.97■■□□□ 1.59
PDLIM3-203ENST00000284771 BRMS1Q9HCU9 246 aa24.97■■□□□ 1.59
PDLIM3-203ENST00000284771 CCNA1P78396 465 aa24.97■■□□□ 1.59
PDLIM3-203ENST00000284771 RNF207Q6ZRF8 634 aa24.97■■□□□ 1.59
PDLIM3-203ENST00000284771 CYP39A1Q9NYL5 469 aa24.97■■□□□ 1.59
PDLIM3-203ENST00000284771 FBXO40Q9UH90 709 aa24.97■■□□□ 1.59
PDLIM3-203ENST00000284771 DOCK3Q8IZD9 2030 aa24.96■■□□□ 1.59
PDLIM3-203ENST00000284771 EDIL3O43854 480 aa24.96■■□□□ 1.59
PDLIM3-203ENST00000284771 PIK3AP1Q6ZUJ8 805 aa24.96■■□□□ 1.59
PDLIM3-203ENST00000284771 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.96■■□□□ 1.59
PDLIM3-203ENST00000284771 SYTL5Q8TDW5 730 aaPredicted RBP24.96■■□□□ 1.59
PDLIM3-203ENST00000284771 RBBP6Q7Z6E9 1792 aaKnown RBP24.95■■□□□ 1.59
PDLIM3-203ENST00000284771 GNL2Q13823 731 aaKnown RBP24.95■■□□□ 1.58
PDLIM3-203ENST00000284771 FCHSD1Q86WN1 690 aa24.95■■□□□ 1.58
PDLIM3-203ENST00000284771 ZSCAN16Q9H4T2 348 aaPredicted RBP24.95■■□□□ 1.58
PDLIM3-203ENST00000284771 MAP3K20Q9NYL2 800 aaKnown RBP24.95■■□□□ 1.58
PDLIM3-203ENST00000284771 ZNFX1Q9P2E3 1918 aaKnown RBP24.95■■□□□ 1.58
PDLIM3-203ENST00000284771 LCTP09848 1927 aa24.95■■□□□ 1.58
PDLIM3-203ENST00000284771 ECM2O94769 699 aaPredicted RBP24.94■■□□□ 1.58
PDLIM3-203ENST00000284771 CTGFP29279 349 aa24.94■■□□□ 1.58
PDLIM3-203ENST00000284771 COPB2P35606 906 aa24.94■■□□□ 1.58
PDLIM3-203ENST00000284771 FOXD4L6Q3SYB3 417 aaPredicted RBP24.94■■□□□ 1.58
PDLIM3-203ENST00000284771 WDR78Q5VTH9 848 aa24.94■■□□□ 1.58
PDLIM3-203ENST00000284771 FOXD4L3Q6VB84 417 aaPredicted RBP24.94■■□□□ 1.58
PDLIM3-203ENST00000284771 ANKRD35Q8N283 1001 aa24.94■■□□□ 1.58
PDLIM3-203ENST00000284771 TOB1P50616 345 aaPredicted RBP24.94■■□□□ 1.58
PDLIM3-203ENST00000284771 GPR142Q7Z601 462 aa24.94■■□□□ 1.58
PDLIM3-203ENST00000284771 TEX2Q8IWB9 1127 aa24.94■■□□□ 1.58
PDLIM3-203ENST00000284771 SAMD3Q8N6K7 520 aa24.94■■□□□ 1.58
PDLIM3-203ENST00000284771 TAAR1Q96RJ0 339 aa24.94■■□□□ 1.58
PDLIM3-203ENST00000284771 WNT7AO00755 349 aa24.93■■□□□ 1.58
PDLIM3-203ENST00000284771 BRAPQ7Z569 592 aa24.93■■□□□ 1.58
PDLIM3-203ENST00000284771 ANO3Q9BYT9 981 aa24.93■■□□□ 1.58
PDLIM3-203ENST00000284771 CAP1Q01518 475 aa24.92■■□□□ 1.58
PDLIM3-203ENST00000284771 CNTN2Q02246 1040 aa24.92■■□□□ 1.58
PDLIM3-203ENST00000284771 AP3B2Q13367 1082 aa24.92■■□□□ 1.58
PDLIM3-203ENST00000284771 INF2Q27J81 1249 aa24.92■■□□□ 1.58
PDLIM3-203ENST00000284771 MYSM1Q5VVJ2 828 aa24.92■■□□□ 1.58
PDLIM3-203ENST00000284771 KRT25Q7Z3Z0 450 aa24.92■■□□□ 1.58
PDLIM3-203ENST00000284771 TBCKQ8TEA7 893 aa24.92■■□□□ 1.58
PDLIM3-203ENST00000284771 CRYGNQ8WXF5 182 aa24.92■■□□□ 1.58
PDLIM3-203ENST00000284771 TNPO1Q92973 898 aaKnown RBP24.92■■□□□ 1.58
PDLIM3-203ENST00000284771 MYH7BA7E2Y1 1941 aa24.92■■□□□ 1.58
PDLIM3-203ENST00000284771 ASTN1O14525 1302 aa24.92■■□□□ 1.58
PDLIM3-203ENST00000284771 CCDC194A0A1B0GVG4 234 aa24.91■■□□□ 1.58
PDLIM3-203ENST00000284771 PGK2P07205 417 aa24.91■■□□□ 1.58
PDLIM3-203ENST00000284771 MMP19Q99542 508 aa24.91■■□□□ 1.58
PDLIM3-203ENST00000284771 MAF1Q9H063 256 aa24.91■■□□□ 1.58
PDLIM3-203ENST00000284771 DNAJC25-GNG10A0A024R161 153 aa24.91■■□□□ 1.58
PDLIM3-203ENST00000284771 SPDYE3A6NKU9 549 aa24.91■■□□□ 1.58
PDLIM3-203ENST00000284771 FOSP01100 380 aaPredicted RBP24.91■■□□□ 1.58
PDLIM3-203ENST00000284771 FCER1AP12319 257 aa24.91■■□□□ 1.58
PDLIM3-203ENST00000284771 MAPK4P31152 587 aa24.91■■□□□ 1.58
PDLIM3-203ENST00000284771 NONOQ15233 471 aaKnown RBP eCLIP24.91■■□□□ 1.58
PDLIM3-203ENST00000284771 CCAR1Q8IX12 1150 aaKnown RBP24.91■■□□□ 1.58
PDLIM3-203ENST00000284771 PFASO15067 1338 aa24.9■■□□□ 1.58
PDLIM3-203ENST00000284771 PLXNB2O15031 1838 aa24.9■■□□□ 1.58
PDLIM3-203ENST00000284771 TCHHQ07283 1943 aa24.9■■□□□ 1.58
PDLIM3-203ENST00000284771 NBR1Q14596 966 aa24.9■■□□□ 1.58
PDLIM3-203ENST00000284771 KCTD2Q14681 263 aa24.9■■□□□ 1.58
PDLIM3-203ENST00000284771 FAM133AQ8N9E0 248 aa24.9■■□□□ 1.58
PDLIM3-203ENST00000284771 ARHGAP39Q9C0H5 1083 aa24.9■■□□□ 1.58
PDLIM3-203ENST00000284771 ZSWIM8A7E2V4 1837 aa24.9■■□□□ 1.58
PDLIM3-203ENST00000284771 STRNO43815 780 aa24.89■■□□□ 1.58
PDLIM3-203ENST00000284771 PTPREP23469 700 aa24.89■■□□□ 1.58
PDLIM3-203ENST00000284771 UBXN2AP68543 259 aa24.89■■□□□ 1.58
PDLIM3-203ENST00000284771 PLEKHH3Q7Z736 793 aa24.89■■□□□ 1.58
PDLIM3-203ENST00000284771 FGD4Q96M96 766 aa24.89■■□□□ 1.58
PDLIM3-203ENST00000284771 FTOQ9C0B1 505 aaKnown RBP eCLIP24.89■■□□□ 1.58
PDLIM3-203ENST00000284771 DDX49Q9Y6V7 483 aaKnown RBP24.89■■□□□ 1.58
PDLIM3-203ENST00000284771 MYH15Q9Y2K3 1946 aa24.89■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms