RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 PI4KBQ9UBF8 816 aa20.57■□□□□ 0.88
PDLIM3-201ENST00000284767 ATF5Q9Y2D1 282 aaPredicted RBP20.57■□□□□ 0.88
PDLIM3-201ENST00000284767 ADGRG1Q9Y653 693 aa20.57■□□□□ 0.88
PDLIM3-201ENST00000284767 KIF5CO60282 957 aa20.56■□□□□ 0.88
PDLIM3-201ENST00000284767 JAG1P78504 1218 aa20.56■□□□□ 0.88
PDLIM3-201ENST00000284767 PPFIBP1Q86W92 1011 aa20.56■□□□□ 0.88
PDLIM3-201ENST00000284767 TMEM260Q9NX78 707 aa20.56■□□□□ 0.88
PDLIM3-201ENST00000284767 SOWAHDA6NJG2 315 aa20.56■□□□□ 0.88
PDLIM3-201ENST00000284767 CCDC96Q2M329 555 aa20.56■□□□□ 0.88
PDLIM3-201ENST00000284767 CERKLQ49MI3 558 aaPredicted RBP20.56■□□□□ 0.88
PDLIM3-201ENST00000284767 MSL3Q8N5Y2 521 aaKnown RBP20.56■□□□□ 0.88
PDLIM3-201ENST00000284767 BIN2Q9UBW5 565 aaPredicted RBP20.56■□□□□ 0.88
PDLIM3-201ENST00000284767 CDC23Q9UJX2 597 aa20.56■□□□□ 0.88
PDLIM3-201ENST00000284767 TCP10L2B9ZVM9 353 aa20.55■□□□□ 0.88
PDLIM3-201ENST00000284767 BMP15O95972 392 aa20.55■□□□□ 0.88
PDLIM3-201ENST00000284767 ZNF543Q08ER8 600 aa20.55■□□□□ 0.88
PDLIM3-201ENST00000284767 MTF1Q14872 753 aa20.55■□□□□ 0.88
PDLIM3-201ENST00000284767 SEPT2Q15019 361 aa20.55■□□□□ 0.88
PDLIM3-201ENST00000284767 SPATA1Q5VX52 437 aa20.55■□□□□ 0.88
PDLIM3-201ENST00000284767 APTXQ7Z2E3 356 aaKnown RBP20.55■□□□□ 0.88
PDLIM3-201ENST00000284767 DAGLBQ8NCG7 672 aa20.55■□□□□ 0.88
PDLIM3-201ENST00000284767 BBXQ8WY36 941 aaPredicted RBP20.55■□□□□ 0.88
PDLIM3-201ENST00000284767 CTAGE1Q96RT6 745 aa20.55■□□□□ 0.88
PDLIM3-201ENST00000284767 DHX36Q9H2U1 1008 aaKnown RBP20.55■□□□□ 0.88
PDLIM3-201ENST00000284767 EEF2P13639 858 aaKnown RBP20.55■□□□□ 0.88
PDLIM3-201ENST00000284767 RAD51AP2Q09MP3 1159 aa20.55■□□□□ 0.88
PDLIM3-201ENST00000284767 JMJD4Q9H9V9 463 aa20.55■□□□□ 0.88
PDLIM3-201ENST00000284767 MYH4Q9Y623 1939 aa20.55■□□□□ 0.88
PDLIM3-201ENST00000284767 MYO3BQ8WXR4 1341 aa20.55■□□□□ 0.88
PDLIM3-201ENST00000284767 PP2D1A8MPX8 630 aa20.54■□□□□ 0.88
PDLIM3-201ENST00000284767 PPP1R11O60927 126 aaPredicted RBP20.54■□□□□ 0.88
PDLIM3-201ENST00000284767 CAPN2P17655 700 aa20.54■□□□□ 0.88
PDLIM3-201ENST00000284767 PBX1P40424 430 aa20.54■□□□□ 0.88
PDLIM3-201ENST00000284767 RRP1BQ14684 758 aaKnown RBP20.54■□□□□ 0.88
PDLIM3-201ENST00000284767 ASPRV1Q53RT3 343 aa20.54■□□□□ 0.88
PDLIM3-201ENST00000284767 ADGRF4Q8IZF3 695 aa20.54■□□□□ 0.88
PDLIM3-201ENST00000284767 IGSF22Q8N9C0 903 aa20.54■□□□□ 0.88
PDLIM3-201ENST00000284767 RAB21Q9UL25 225 aa20.54■□□□□ 0.88
PDLIM3-201ENST00000284767 SRCAPQ6ZRS2 3230 aa20.54■□□□□ 0.88
PDLIM3-201ENST00000284767 RAD9BQ6WBX8 426 aa20.54■□□□□ 0.88
PDLIM3-201ENST00000284767 SIAH1Q8IUQ4 282 aa20.54■□□□□ 0.88
PDLIM3-201ENST00000284767 MSANTD4Q8NCY6 345 aa20.54■□□□□ 0.88
PDLIM3-201ENST00000284767 PPP1R1BQ9UD71 204 aaPredicted RBP20.54■□□□□ 0.88
PDLIM3-201ENST00000284767 RBL2Q08999 1139 aa20.53■□□□□ 0.88
PDLIM3-201ENST00000284767 LETM2Q2VYF4 491 aa20.53■□□□□ 0.88
PDLIM3-201ENST00000284767 RSBN1LQ6PCB5 846 aaPredicted RBP20.53■□□□□ 0.88
PDLIM3-201ENST00000284767 RTKN2Q8IZC4 609 aa20.53■□□□□ 0.88
PDLIM3-201ENST00000284767 CCDC51Q96ER9 411 aa20.53■□□□□ 0.88
PDLIM3-201ENST00000284767 TRIM34Q9BYJ4 488 aa20.53■□□□□ 0.88
PDLIM3-201ENST00000284767 LZTFL1Q9NQ48 299 aa20.53■□□□□ 0.88
PDLIM3-201ENST00000284767 GREB1LQ9C091 1923 aaPredicted RBP20.53■□□□□ 0.88
PDLIM3-201ENST00000284767 USP17L10C9JJH3 530 aa20.53■□□□□ 0.88
PDLIM3-201ENST00000284767 ERLIN1O75477 346 aa20.53■□□□□ 0.88
PDLIM3-201ENST00000284767 SOGA3Q5TF21 947 aa20.53■□□□□ 0.88
PDLIM3-201ENST00000284767 PAGE5Q96GU1 130 aa20.53■□□□□ 0.88
PDLIM3-201ENST00000284767 IRX2Q9BZI1 471 aaPredicted RBP20.53■□□□□ 0.88
PDLIM3-201ENST00000284767 ANKZF1Q9H8Y5 726 aa20.53■□□□□ 0.88
PDLIM3-201ENST00000284767 C6orf50Q9HD87 102 aa20.53■□□□□ 0.88
PDLIM3-201ENST00000284767 ADD3Q9UEY8 706 aaKnown RBP20.53■□□□□ 0.88
PDLIM3-201ENST00000284767 ADAM21Q9UKJ8 722 aa20.53■□□□□ 0.88
PDLIM3-201ENST00000284767 SCAF8Q9UPN6 1271 aaKnown RBP20.53■□□□□ 0.88
PDLIM3-201ENST00000284767 SYNRGQ9UMZ2 1314 aa20.53■□□□□ 0.88
PDLIM3-201ENST00000284767 TEX33O43247 280 aa20.52■□□□□ 0.88
PDLIM3-201ENST00000284767 ZSCAN26Q16670 478 aa20.52■□□□□ 0.88
PDLIM3-201ENST00000284767 CDKAL1Q5VV42 579 aa20.52■□□□□ 0.88
PDLIM3-201ENST00000284767 HDXQ7Z353 690 aa20.52■□□□□ 0.88
PDLIM3-201ENST00000284767 CDAN1Q8IWY9 1227 aa20.52■□□□□ 0.88
PDLIM3-201ENST00000284767 CSRNP1Q96S65 589 aa20.52■□□□□ 0.88
PDLIM3-201ENST00000284767 PSMD1Q99460 953 aa20.52■□□□□ 0.88
PDLIM3-201ENST00000284767 CWC15Q9P013 229 aaKnown RBP20.52■□□□□ 0.88
PDLIM3-201ENST00000284767 MFAP3LO75121 409 aa20.52■□□□□ 0.88
PDLIM3-201ENST00000284767 FECHP22830 423 aa20.52■□□□□ 0.88
PDLIM3-201ENST00000284767 FILIP1LQ4L180 1135 aa20.52■□□□□ 0.88
PDLIM3-201ENST00000284767 GALNT17Q6IS24 598 aa20.52■□□□□ 0.88
PDLIM3-201ENST00000284767 CNGA4Q8IV77 575 aa20.52■□□□□ 0.88
PDLIM3-201ENST00000284767 GOLGA5Q8TBA6 731 aa20.52■□□□□ 0.88
PDLIM3-201ENST00000284767 CCDC17Q96LX7 622 aa20.52■□□□□ 0.88
PDLIM3-201ENST00000284767 SMARCA1P28370 1054 aa20.51■□□□□ 0.87
PDLIM3-201ENST00000284767 CUL4BQ13620 913 aa20.51■□□□□ 0.87
PDLIM3-201ENST00000284767 BEND6Q5SZJ8 279 aaPredicted RBP20.51■□□□□ 0.87
PDLIM3-201ENST00000284767 TATDN1Q6P1N9 297 aa20.51■□□□□ 0.87
PDLIM3-201ENST00000284767 NUP88Q99567 741 aaPredicted RBP20.51■□□□□ 0.87
PDLIM3-201ENST00000284767 ITIH6Q6UXX5 1313 aa20.51■□□□□ 0.87
PDLIM3-201ENST00000284767 SPDYE2BA6NHP3 402 aa20.51■□□□□ 0.87
PDLIM3-201ENST00000284767 H3BQF6 201 aa20.51■□□□□ 0.87
PDLIM3-201ENST00000284767 CCNT1O60563 726 aaKnown RBP20.51■□□□□ 0.87
PDLIM3-201ENST00000284767 SPDYE6P0CI01 402 aa20.51■□□□□ 0.87
PDLIM3-201ENST00000284767 TBCKQ8TEA7 893 aa20.51■□□□□ 0.87
PDLIM3-201ENST00000284767 PLIN2Q99541 437 aa20.51■□□□□ 0.87
PDLIM3-201ENST00000284767 BLZF1Q9H2G9 400 aa20.51■□□□□ 0.87
PDLIM3-201ENST00000284767 CTAGE9A4FU28 777 aa20.5■□□□□ 0.87
PDLIM3-201ENST00000284767 GNA11P29992 359 aa20.5■□□□□ 0.87
PDLIM3-201ENST00000284767 NONOQ15233 471 aaKnown RBP eCLIP20.5■□□□□ 0.87
PDLIM3-201ENST00000284767 SH3RF1Q7Z6J0 888 aa20.5■□□□□ 0.87
PDLIM3-201ENST00000284767 FBXO41Q8TF61 875 aa20.5■□□□□ 0.87
PDLIM3-201ENST00000284767 GMLQ99445 158 aa20.5■□□□□ 0.87
PDLIM3-201ENST00000284767 MTRQ99707 1265 aa20.5■□□□□ 0.87
PDLIM3-201ENST00000284767 SHTN1A0MZ66 631 aa20.5■□□□□ 0.87
PDLIM3-201ENST00000284767 EIF3JO75822 258 aaKnown RBP20.5■□□□□ 0.87
PDLIM3-201ENST00000284767 ICA1Q05084 483 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms