RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 RAD51AP2Q09MP3 1159 aa4.43□□□□□ -1.7
SCN3A-201ENST00000283254 SLFN13Q68D06 897 aa4.43□□□□□ -1.7
SCN3A-201ENST00000283254 MIS18BP1Q6P0N0 1132 aa4.43□□□□□ -1.7
SCN3A-201ENST00000283254 CENPKQ9BS16 269 aa4.43□□□□□ -1.7
SCN3A-201ENST00000283254 TRIM31Q9BZY9 425 aa4.43□□□□□ -1.7
SCN3A-201ENST00000283254 HYOU1Q9Y4L1 999 aa4.43□□□□□ -1.7
SCN3A-201ENST00000283254 MAP3K15Q6ZN16 1313 aa4.43□□□□□ -1.7
SCN3A-201ENST00000283254 PCCAP05165 728 aaPredicted RBP4.43□□□□□ -1.7
SCN3A-201ENST00000283254 PIK3CAP42336 1068 aa4.43□□□□□ -1.7
SCN3A-201ENST00000283254 PRIM1P49642 420 aaKnown RBP4.43□□□□□ -1.7
SCN3A-201ENST00000283254 HSPA2P54652 639 aa4.43□□□□□ -1.7
SCN3A-201ENST00000283254 YWHAGP61981 247 aaKnown RBP eCLIP4.43□□□□□ -1.7
SCN3A-201ENST00000283254 RAD51Q06609 339 aa4.43□□□□□ -1.7
SCN3A-201ENST00000283254 TBCCQ15814 346 aa4.43□□□□□ -1.7
SCN3A-201ENST00000283254 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.43□□□□□ -1.7
SCN3A-201ENST00000283254 DALRD3Q5D0E6 543 aaKnown RBP4.43□□□□□ -1.7
SCN3A-201ENST00000283254 PLA2G4DQ86XP0 818 aa4.43□□□□□ -1.7
SCN3A-201ENST00000283254 RTKN2Q8IZC4 609 aa4.43□□□□□ -1.7
SCN3A-201ENST00000283254 GIMAP8Q8ND71 665 aaPredicted RBP4.43□□□□□ -1.7
SCN3A-201ENST00000283254 U2AF1L4Q8WU68 220 aaKnown RBP4.43□□□□□ -1.7
SCN3A-201ENST00000283254 DBNDD2Q9BQY9 259 aa4.43□□□□□ -1.7
SCN3A-201ENST00000283254 RASSF4Q9H2L5 321 aa4.43□□□□□ -1.7
SCN3A-201ENST00000283254 FAM207AQ9NSI2 230 aaPredicted RBP4.43□□□□□ -1.7
SCN3A-201ENST00000283254 PPME1Q9Y570 386 aa4.43□□□□□ -1.7
SCN3A-201ENST00000283254 SAR1BQ9Y6B6 198 aa4.43□□□□□ -1.7
SCN3A-201ENST00000283254 ANKARQ7Z5J8 1434 aa4.42□□□□□ -1.7
SCN3A-201ENST00000283254 MCF2LO15068 1137 aa4.42□□□□□ -1.7
SCN3A-201ENST00000283254 POLR2DO15514 142 aaKnown RBP4.42□□□□□ -1.7
SCN3A-201ENST00000283254 ZNF202O95125 648 aa4.42□□□□□ -1.7
SCN3A-201ENST00000283254 HOXD10P28358 340 aa4.42□□□□□ -1.7
SCN3A-201ENST00000283254 CLCN1P35523 988 aa4.42□□□□□ -1.7
SCN3A-201ENST00000283254 ECE1P42892 770 aa4.42□□□□□ -1.7
SCN3A-201ENST00000283254 FANCCQ00597 558 aa4.42□□□□□ -1.7
SCN3A-201ENST00000283254 DEUP1Q05D60 604 aa4.42□□□□□ -1.7
SCN3A-201ENST00000283254 SEPT2Q15019 361 aa4.42□□□□□ -1.7
SCN3A-201ENST00000283254 PPM1KQ8N3J5 372 aa4.42□□□□□ -1.7
SCN3A-201ENST00000283254 OR8K1Q8NGG5 319 aa4.42□□□□□ -1.7
SCN3A-201ENST00000283254 NLRP7Q8WX94 980 aa4.42□□□□□ -1.7
SCN3A-201ENST00000283254 SPZ1Q9BXG8 430 aa4.42□□□□□ -1.7
SCN3A-201ENST00000283254 USP26Q9BXU7 913 aa4.42□□□□□ -1.7
SCN3A-201ENST00000283254 MED4Q9NPJ6 270 aa4.42□□□□□ -1.7
SCN3A-201ENST00000283254 ABT1Q9ULW3 272 aaKnown RBP4.42□□□□□ -1.7
SCN3A-201ENST00000283254 INSRP06213 1382 aa4.42□□□□□ -1.7
SCN3A-201ENST00000283254 PMLP29590 882 aa4.42□□□□□ -1.7
SCN3A-201ENST00000283254 LONP1P36776 959 aaKnown RBP4.42□□□□□ -1.7
SCN3A-201ENST00000283254 LONRF2Q1L5Z9 754 aa4.42□□□□□ -1.7
SCN3A-201ENST00000283254 MYSM1Q5VVJ2 828 aa4.42□□□□□ -1.7
SCN3A-201ENST00000283254 SLFN12LQ6IEE8 588 aa4.42□□□□□ -1.7
SCN3A-201ENST00000283254 PLEKHM2Q8IWE5 1019 aa4.42□□□□□ -1.7
SCN3A-201ENST00000283254 RNF168Q8IYW5 571 aaPredicted RBP4.42□□□□□ -1.7
SCN3A-201ENST00000283254 LRGUKQ96M69 825 aa4.42□□□□□ -1.7
SCN3A-201ENST00000283254 EIF2AQ9BY44 585 aaKnown RBP4.42□□□□□ -1.7
SCN3A-201ENST00000283254 TMEM206Q9H813 350 aa4.42□□□□□ -1.7
SCN3A-201ENST00000283254 KIF21AQ7Z4S6 1674 aa4.42□□□□□ -1.7
SCN3A-201ENST00000283254 CFAP74Q9C0B2 1584 aa4.42□□□□□ -1.7
SCN3A-201ENST00000283254 NOP14P78316 857 aaKnown RBP4.42□□□□□ -1.7
SCN3A-201ENST00000283254 PPP2R5CQ13362 524 aa4.42□□□□□ -1.7
SCN3A-201ENST00000283254 RC3H1Q5TC82 1133 aaKnown RBP4.42□□□□□ -1.7
SCN3A-201ENST00000283254 RRAGAQ7L523 313 aa4.42□□□□□ -1.7
SCN3A-201ENST00000283254 PNMA8AQ86V59 439 aaPredicted RBP4.42□□□□□ -1.7
SCN3A-201ENST00000283254 KIRREL3Q8IZU9 778 aa4.42□□□□□ -1.7
SCN3A-201ENST00000283254 GDAP1Q8TB36 358 aa4.42□□□□□ -1.7
SCN3A-201ENST00000283254 GIPC2Q8TF65 315 aa4.42□□□□□ -1.7
SCN3A-201ENST00000283254 FAM149B1Q96BN6 582 aa4.42□□□□□ -1.7
SCN3A-201ENST00000283254 GBP5Q96PP8 586 aa4.42□□□□□ -1.7
SCN3A-201ENST00000283254 MYO1AQ9UBC5 1043 aa4.42□□□□□ -1.7
SCN3A-201ENST00000283254 DDX25Q9UHL0 483 aaKnown RBP4.42□□□□□ -1.7
SCN3A-201ENST00000283254 ATP7AQ04656 1500 aa4.42□□□□□ -1.7
SCN3A-201ENST00000283254 RPAP1Q9BWH6 1393 aaPredicted RBP4.42□□□□□ -1.7
SCN3A-201ENST00000283254 MED23Q9ULK4 1368 aa4.42□□□□□ -1.7
SCN3A-201ENST00000283254 KCNJ18B7U540 433 aa4.42□□□□□ -1.7
SCN3A-201ENST00000283254 DPYSL4O14531 572 aa4.42□□□□□ -1.7
SCN3A-201ENST00000283254 SMIM24O75264 130 aa4.42□□□□□ -1.7
SCN3A-201ENST00000283254 DLATP10515 647 aaKnown RBP4.42□□□□□ -1.7
SCN3A-201ENST00000283254 GTF2A1P52655 376 aaPredicted RBP4.42□□□□□ -1.7
SCN3A-201ENST00000283254 KCNJ12Q14500 433 aa4.42□□□□□ -1.7
SCN3A-201ENST00000283254 BRD3Q15059 726 aa4.42□□□□□ -1.7
SCN3A-201ENST00000283254 LRCH2Q5VUJ6 765 aa4.42□□□□□ -1.7
SCN3A-201ENST00000283254 MYLK4Q86YV6 388 aaPredicted RBP4.42□□□□□ -1.7
SCN3A-201ENST00000283254 RYBPQ8N488 228 aaPredicted RBP4.42□□□□□ -1.7
SCN3A-201ENST00000283254 GANCQ8TET4 914 aa4.42□□□□□ -1.7
SCN3A-201ENST00000283254 RNF139Q8WU17 664 aa4.42□□□□□ -1.7
SCN3A-201ENST00000283254 ZBED2Q9BTP6 218 aa4.42□□□□□ -1.7
SCN3A-201ENST00000283254 FAM96AQ9H5X1 160 aa4.42□□□□□ -1.7
SCN3A-201ENST00000283254 MRPL47Q9HD33 250 aaKnown RBP4.42□□□□□ -1.7
SCN3A-201ENST00000283254 SUN2Q9UH99 717 aa4.42□□□□□ -1.7
SCN3A-201ENST00000283254 TMEM2Q9UHN6 1383 aa4.42□□□□□ -1.7
SCN3A-201ENST00000283254 HNRNPCL2B2RXH8 293 aa4.42□□□□□ -1.7
SCN3A-201ENST00000283254 KRIT1O00522 736 aa4.42□□□□□ -1.7
SCN3A-201ENST00000283254 HNRNPCL1O60812 293 aaKnown RBP4.42□□□□□ -1.7
SCN3A-201ENST00000283254 VAMP4O75379 141 aa4.42□□□□□ -1.7
SCN3A-201ENST00000283254 ECM2O94769 699 aaPredicted RBP4.42□□□□□ -1.7
SCN3A-201ENST00000283254 RXRAP19793 462 aa4.42□□□□□ -1.7
SCN3A-201ENST00000283254 NNMTP40261 264 aa4.42□□□□□ -1.7
SCN3A-201ENST00000283254 GTF2IP78347 998 aa4.42□□□□□ -1.7
SCN3A-201ENST00000283254 EIF2B5Q13144 721 aaKnown RBP4.42□□□□□ -1.7
SCN3A-201ENST00000283254 MMEL1Q495T6 779 aa4.42□□□□□ -1.7
SCN3A-201ENST00000283254 SCG3Q8WXD2 468 aaKnown RBP4.42□□□□□ -1.7
SCN3A-201ENST00000283254 DISC1Q9NRI5 854 aa4.42□□□□□ -1.7
SCN3A-201ENST00000283254 OGFRQ9NZT2 677 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms