RNA–Protein interactions for RNA: ENST00000278412.6

SSRP1-201, Transcript of structure specific recognition protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSRP1, Length 2,819 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-201ENST00000278412 HOOK2Q96ED9 719 aa13.32□□□□□ -0.28
SSRP1-201ENST00000278412 COL20A1Q9P218 1284 aa13.32□□□□□ -0.28
SSRP1-201ENST00000278412 SUPT20HL1Q3ZLR7 823 aa13.31□□□□□ -0.28
SSRP1-201ENST00000278412 ANO3Q9BYT9 981 aa13.31□□□□□ -0.28
SSRP1-201ENST00000278412 AFG3L2Q9Y4W6 797 aa13.31□□□□□ -0.28
SSRP1-201ENST00000278412 CEP350Q5VT06 3117 aa13.31□□□□□ -0.28
SSRP1-201ENST00000278412 POTEMA6NI47 508 aa13.31□□□□□ -0.28
SSRP1-201ENST00000278412 AP5Z1O43299 807 aa13.31□□□□□ -0.28
SSRP1-201ENST00000278412 TECP42680 631 aa13.31□□□□□ -0.28
SSRP1-201ENST00000278412 TXKP42681 527 aa13.31□□□□□ -0.28
SSRP1-201ENST00000278412 HSP90AA2PQ14568 343 aaPredicted RBP13.31□□□□□ -0.28
SSRP1-201ENST00000278412 ANO6Q4KMQ2 910 aa13.31□□□□□ -0.28
SSRP1-201ENST00000278412 RBM43Q6ZSC3 357 aaKnown RBP13.31□□□□□ -0.28
SSRP1-201ENST00000278412 LUZP1Q86V48 1076 aa13.31□□□□□ -0.28
SSRP1-201ENST00000278412 JMYQ8N9B5 988 aa13.31□□□□□ -0.28
SSRP1-201ENST00000278412 NUDT12Q9BQG2 462 aa13.31□□□□□ -0.28
SSRP1-201ENST00000278412 SLF1Q9BQI6 1058 aa13.31□□□□□ -0.28
SSRP1-201ENST00000278412 PITPNM2Q9BZ72 1349 aa13.31□□□□□ -0.28
SSRP1-201ENST00000278412 GRIN3BO60391 1043 aa13.31□□□□□ -0.28
SSRP1-201ENST00000278412 ALAS1P13196 640 aa13.31□□□□□ -0.28
SSRP1-201ENST00000278412 AFMP43652 599 aa13.31□□□□□ -0.28
SSRP1-201ENST00000278412 MTRQ99707 1265 aa13.31□□□□□ -0.28
SSRP1-201ENST00000278412 CCPG1Q9ULG6 757 aa13.31□□□□□ -0.28
SSRP1-201ENST00000278412 DNAH12Q6ZR08 3092 aa13.3□□□□□ -0.28
SSRP1-201ENST00000278412 PARP14Q460N5 1801 aa13.3□□□□□ -0.28
SSRP1-201ENST00000278412 PTPRFP10586 1907 aa13.3□□□□□ -0.28
SSRP1-201ENST00000278412 FAM86B1E9PN63 330 aa13.3□□□□□ -0.28
SSRP1-201ENST00000278412 NEMFO60524 1076 aa13.3□□□□□ -0.28
SSRP1-201ENST00000278412 FAM86B2P0C5J1 330 aa13.3□□□□□ -0.28
SSRP1-201ENST00000278412 MAP3K9P80192 1104 aa13.3□□□□□ -0.28
SSRP1-201ENST00000278412 DPCR1Q3MIW9 517 aa13.3□□□□□ -0.28
SSRP1-201ENST00000278412 GALNT17Q6IS24 598 aa13.3□□□□□ -0.28
SSRP1-201ENST00000278412 RRAGDQ9NQL2 400 aaPredicted RBP13.3□□□□□ -0.28
SSRP1-201ENST00000278412 FEM1BQ9UK73 627 aa13.3□□□□□ -0.28
SSRP1-201ENST00000278412 WDR46O15213 610 aaKnown RBP13.3□□□□□ -0.28
SSRP1-201ENST00000278412 ACTN4O43707 911 aaKnown RBP13.3□□□□□ -0.28
SSRP1-201ENST00000278412 GJA5P36382 358 aa13.3□□□□□ -0.28
SSRP1-201ENST00000278412 TRAPPC10P48553 1259 aa13.3□□□□□ -0.28
SSRP1-201ENST00000278412 MRPL12P52815 198 aaKnown RBP13.3□□□□□ -0.28
SSRP1-201ENST00000278412 USP50Q70EL3 339 aaPredicted RBP13.3□□□□□ -0.28
SSRP1-201ENST00000278412 IL31RAQ8NI17 732 aa13.3□□□□□ -0.28
SSRP1-201ENST00000278412 CHURC1Q8WUH1 139 aa13.3□□□□□ -0.28
SSRP1-201ENST00000278412 HAS1Q92839 578 aa13.3□□□□□ -0.28
SSRP1-201ENST00000278412 SH2D4AQ9H788 454 aa13.3□□□□□ -0.28
SSRP1-201ENST00000278412 PAPPA2Q9BXP8 1791 aa13.3□□□□□ -0.28
SSRP1-201ENST00000278412 BMP6P22004 513 aa13.29□□□□□ -0.28
SSRP1-201ENST00000278412 STAT3P40763 770 aa13.29□□□□□ -0.28
SSRP1-201ENST00000278412 KRBA2Q6ZNG9 492 aa13.29□□□□□ -0.28
SSRP1-201ENST00000278412 WDR18Q9BV38 432 aa13.29□□□□□ -0.28
SSRP1-201ENST00000278412 BLZF1Q9H2G9 400 aa13.29□□□□□ -0.28
SSRP1-201ENST00000278412 CEP131Q9UPN4 1083 aa13.29□□□□□ -0.28
SSRP1-201ENST00000278412 PRPF38AQ8NAV1 312 aaKnown RBP13.29□□□□□ -0.28
SSRP1-201ENST00000278412 CLEC4DQ8WXI8 215 aa13.29□□□□□ -0.28
SSRP1-201ENST00000278412 PPP1R9AQ9ULJ8 1098 aa13.29□□□□□ -0.28
SSRP1-201ENST00000278412 PPP2R3BQ9Y5P8 575 aa13.29□□□□□ -0.28
SSRP1-201ENST00000278412 WDR90Q96KV7 1748 aa13.29□□□□□ -0.28
SSRP1-201ENST00000278412 VWA5AO00534 786 aa13.28□□□□□ -0.28
SSRP1-201ENST00000278412 COBLO75128 1261 aa13.28□□□□□ -0.28
SSRP1-201ENST00000278412 CNNM3Q8NE01 707 aa13.28□□□□□ -0.28
SSRP1-201ENST00000278412 SLC38A10Q9HBR0 1119 aa13.28□□□□□ -0.28
SSRP1-201ENST00000278412 FAM237AA0A1B0GTK4 181 aa13.28□□□□□ -0.28
SSRP1-201ENST00000278412 hCG_1984214I3L0E3 225 aa13.28□□□□□ -0.28
SSRP1-201ENST00000278412 PPP1R12BO60237 982 aaPredicted RBP13.28□□□□□ -0.28
SSRP1-201ENST00000278412 OR52Z1P0C646 297 aa13.28□□□□□ -0.28
SSRP1-201ENST00000278412 ARHGAP4P98171 946 aa13.28□□□□□ -0.28
SSRP1-201ENST00000278412 MDM2Q00987 491 aaPredicted RBP13.28□□□□□ -0.28
SSRP1-201ENST00000278412 PRR16Q569H4 304 aa13.28□□□□□ -0.28
SSRP1-201ENST00000278412 PPP1R18Q6NYC8 613 aa13.28□□□□□ -0.28
SSRP1-201ENST00000278412 ZNF713Q8N859 430 aaPredicted RBP13.28□□□□□ -0.28
SSRP1-201ENST00000278412 CRYGNQ8WXF5 182 aa13.28□□□□□ -0.28
SSRP1-201ENST00000278412 MTMR9Q96QG7 549 aa13.28□□□□□ -0.28
SSRP1-201ENST00000278412 MMTAG2Q9BU76 263 aaKnown RBP13.28□□□□□ -0.28
SSRP1-201ENST00000278412 DDX25Q9UHL0 483 aaKnown RBP13.28□□□□□ -0.28
SSRP1-201ENST00000278412 PCDHA5Q9Y5H7 936 aa13.28□□□□□ -0.28
SSRP1-201ENST00000278412 HTTP42858 3142 aa13.27□□□□□ -0.28
SSRP1-201ENST00000278412 MRE11P49959 708 aa13.27□□□□□ -0.28
SSRP1-201ENST00000278412 TMEM132BQ14DG7 1078 aa13.27□□□□□ -0.28
SSRP1-201ENST00000278412 ECM1Q16610 540 aa13.27□□□□□ -0.28
SSRP1-201ENST00000278412 NAALADL2Q58DX5 795 aa13.27□□□□□ -0.28
SSRP1-201ENST00000278412 GADL1Q6ZQY3 521 aa13.27□□□□□ -0.28
SSRP1-201ENST00000278412 LPAR1Q92633 364 aa13.27□□□□□ -0.28
SSRP1-201ENST00000278412 KIAA1468Q9P260 1216 aa13.27□□□□□ -0.28
SSRP1-201ENST00000278412 SYNPO2Q9UMS6 1093 aa13.27□□□□□ -0.28
SSRP1-201ENST00000278412 ECM2O94769 699 aaPredicted RBP13.27□□□□□ -0.29
SSRP1-201ENST00000278412 DHX8Q14562 1220 aaKnown RBP13.27□□□□□ -0.29
SSRP1-201ENST00000278412 PLS1Q14651 629 aa13.27□□□□□ -0.29
SSRP1-201ENST00000278412 CALCRLQ16602 461 aa13.27□□□□□ -0.29
SSRP1-201ENST00000278412 DTHD1Q6ZMT9 781 aa13.27□□□□□ -0.29
SSRP1-201ENST00000278412 SMYD4Q8IYR2 804 aaPredicted RBP13.27□□□□□ -0.29
SSRP1-201ENST00000278412 LENG9Q96B70 501 aa13.27□□□□□ -0.29
SSRP1-201ENST00000278412 PKD2L1Q9P0L9 805 aa13.27□□□□□ -0.29
SSRP1-201ENST00000278412 CSADQ9Y600 493 aa13.27□□□□□ -0.29
SSRP1-201ENST00000278412 ICAM1P05362 532 aa13.26□□□□□ -0.29
SSRP1-201ENST00000278412 CCDC192P0DO97 292 aa13.26□□□□□ -0.29
SSRP1-201ENST00000278412 PLCB2Q00722 1185 aa13.26□□□□□ -0.29
SSRP1-201ENST00000278412 E2F4Q16254 413 aa13.26□□□□□ -0.29
SSRP1-201ENST00000278412 NOL9Q5SY16 702 aaKnown RBP13.26□□□□□ -0.29
SSRP1-201ENST00000278412 FAM160B2Q86V87 743 aa13.26□□□□□ -0.29
SSRP1-201ENST00000278412 ZNF579Q8NAF0 562 aaKnown RBP13.26□□□□□ -0.29
SSRP1-201ENST00000278412 FERMT2Q96AC1 680 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms