RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 L3MBTL3Q96JM7 780 aaPredicted RBP17.43■□□□□ 0.38
CTDSP1-201ENST00000273062 SERTAD1Q9UHV2 236 aa17.43■□□□□ 0.38
CTDSP1-201ENST00000273062 FAM237AA0A1B0GTK4 181 aa17.42■□□□□ 0.38
CTDSP1-201ENST00000273062 LGR5O75473 907 aa17.42■□□□□ 0.38
CTDSP1-201ENST00000273062 PLCD1P51178 756 aa17.42■□□□□ 0.38
CTDSP1-201ENST00000273062 PTF1AQ7RTS3 328 aa17.42■□□□□ 0.38
CTDSP1-201ENST00000273062 CCT6BQ92526 530 aa17.42■□□□□ 0.38
CTDSP1-201ENST00000273062 MAP3K14Q99558 947 aa17.42■□□□□ 0.38
CTDSP1-201ENST00000273062 IDEP14735 1019 aa17.42■□□□□ 0.38
CTDSP1-201ENST00000273062 SARSP49591 514 aaKnown RBP17.42■□□□□ 0.38
CTDSP1-201ENST00000273062 HAUS3Q68CZ6 603 aa17.42■□□□□ 0.38
CTDSP1-201ENST00000273062 PIH1D3Q9NQM4 214 aaKnown RBP17.42■□□□□ 0.38
CTDSP1-201ENST00000273062 POLR2DO15514 142 aaKnown RBP17.41■□□□□ 0.38
CTDSP1-201ENST00000273062 DNAJC8O75937 253 aaPredicted RBP17.41■□□□□ 0.38
CTDSP1-201ENST00000273062 CAMTA2O94983 1202 aa17.41■□□□□ 0.38
CTDSP1-201ENST00000273062 PDE8BO95263 885 aa17.41■□□□□ 0.38
CTDSP1-201ENST00000273062 ATP4AP20648 1035 aa17.41■□□□□ 0.38
CTDSP1-201ENST00000273062 GUCY2FP51841 1108 aa17.41■□□□□ 0.38
CTDSP1-201ENST00000273062 BLMHQ13867 455 aa17.41■□□□□ 0.38
CTDSP1-201ENST00000273062 EMBQ6PCB8 327 aa17.41■□□□□ 0.38
CTDSP1-201ENST00000273062 SPATA21Q7Z572 469 aa17.41■□□□□ 0.38
CTDSP1-201ENST00000273062 ZNF274Q96GC6 653 aaPredicted RBP17.41■□□□□ 0.38
CTDSP1-201ENST00000273062 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.41■□□□□ 0.382e-7■■□□□ 12.2
CTDSP1-201ENST00000273062 MYH3P11055 1940 aa17.41■□□□□ 0.38
CTDSP1-201ENST00000273062 MYH14Q7Z406 1995 aaKnown RBP17.41■□□□□ 0.38
CTDSP1-201ENST00000273062 MACROD2A1Z1Q3 448 aa17.41■□□□□ 0.38
CTDSP1-201ENST00000273062 GMNCA6NCL1 334 aa17.41■□□□□ 0.38
CTDSP1-201ENST00000273062 A6NHS1 94 aa17.41■□□□□ 0.38
CTDSP1-201ENST00000273062 NEFHP12036 1026 aa17.41■□□□□ 0.38
CTDSP1-201ENST00000273062 FAM98CQ17RN3 349 aaKnown RBP17.41■□□□□ 0.38
CTDSP1-201ENST00000273062 LACTB2Q53H82 288 aaPredicted RBP17.41■□□□□ 0.38
CTDSP1-201ENST00000273062 CFAP58Q5T655 872 aa17.41■□□□□ 0.38
CTDSP1-201ENST00000273062 EMC10Q5UCC4 262 aa17.41■□□□□ 0.38
CTDSP1-201ENST00000273062 VPS37DQ86XT2 251 aa17.41■□□□□ 0.38
CTDSP1-201ENST00000273062 SPICE1Q8N0Z3 855 aa17.41■□□□□ 0.38
CTDSP1-201ENST00000273062 SMCR8Q8TEV9 937 aaPredicted RBP17.41■□□□□ 0.38
CTDSP1-201ENST00000273062 CCDC51Q96ER9 411 aa17.41■□□□□ 0.38
CTDSP1-201ENST00000273062 ATP6V1G3Q96LB4 118 aa17.41■□□□□ 0.38
CTDSP1-201ENST00000273062 PHF20L1A8MW92 1017 aa17.4■□□□□ 0.38
CTDSP1-201ENST00000273062 PPP6R2O75170 966 aa17.4■□□□□ 0.38
CTDSP1-201ENST00000273062 CXCR5P32302 372 aa17.4■□□□□ 0.38
CTDSP1-201ENST00000273062 CARSP49589 748 aaKnown RBP17.4■□□□□ 0.38
CTDSP1-201ENST00000273062 CTCFP49711 727 aaPredicted RBP17.4■□□□□ 0.38
CTDSP1-201ENST00000273062 TUBP50607 506 aa17.4■□□□□ 0.38
CTDSP1-201ENST00000273062 MMGT1Q8N4V1 131 aa17.4■□□□□ 0.38
CTDSP1-201ENST00000273062 SPATA4Q8NEY3 305 aa17.4■□□□□ 0.38
CTDSP1-201ENST00000273062 CAVIN3Q969G5 261 aa17.4■□□□□ 0.38
CTDSP1-201ENST00000273062 FAM163AQ96GL9 167 aaPredicted RBP17.4■□□□□ 0.38
CTDSP1-201ENST00000273062 VPS16Q9H269 839 aa17.4■□□□□ 0.38
CTDSP1-201ENST00000273062 HAUS4Q9H6D7 363 aa17.4■□□□□ 0.38
CTDSP1-201ENST00000273062 STIM2Q9P246 746 aa17.4■□□□□ 0.38
CTDSP1-201ENST00000273062 NFU1Q9UMS0 254 aa17.4■□□□□ 0.38
CTDSP1-201ENST00000273062 THRAP3Q9Y2W1 955 aaKnown RBP17.4■□□□□ 0.38
CTDSP1-201ENST00000273062 PPIP5K2O43314 1243 aa17.4■□□□□ 0.38
CTDSP1-201ENST00000273062 CLSTN1O94985 981 aa17.4■□□□□ 0.38
CTDSP1-201ENST00000273062 NT5DC1Q5TFE4 455 aa17.4■□□□□ 0.38
CTDSP1-201ENST00000273062 CDKAL1Q5VV42 579 aa17.4■□□□□ 0.38
CTDSP1-201ENST00000273062 TBC1D1Q86TI0 1168 aaPredicted RBP17.4■□□□□ 0.38
CTDSP1-201ENST00000273062 NKX2-3Q8TAU0 364 aa17.4■□□□□ 0.38
CTDSP1-201ENST00000273062 PRCCQ92733 491 aaPredicted RBP17.4■□□□□ 0.38
CTDSP1-201ENST00000273062 CDCA7Q9BWT1 371 aaPredicted RBP17.4■□□□□ 0.38
CTDSP1-201ENST00000273062 ARHGEF10LQ9HCE6 1279 aa17.4■□□□□ 0.38
CTDSP1-201ENST00000273062 DENND2AQ9ULE3 1009 aa17.4■□□□□ 0.38
CTDSP1-201ENST00000273062 SPEF2Q9C093 1822 aa17.4■□□□□ 0.38
CTDSP1-201ENST00000273062 NWD2Q9ULI1 1742 aa17.4■□□□□ 0.38
CTDSP1-201ENST00000273062 SYNRGQ9UMZ2 1314 aa17.4■□□□□ 0.38
CTDSP1-201ENST00000273062 TRAPPC3O43617 180 aa17.39■□□□□ 0.37
CTDSP1-201ENST00000273062 FGAP02671 866 aa17.39■□□□□ 0.37
CTDSP1-201ENST00000273062 HHATQ5VTY9 493 aa17.39■□□□□ 0.37
CTDSP1-201ENST00000273062 MFN1Q8IWA4 741 aa17.39■□□□□ 0.37
CTDSP1-201ENST00000273062 OSBPL9Q96SU4 736 aa17.39■□□□□ 0.37
CTDSP1-201ENST00000273062 CHCHD3Q9NX63 227 aaKnown RBP17.39■□□□□ 0.37
CTDSP1-201ENST00000273062 BIN2Q9UBW5 565 aaPredicted RBP17.39■□□□□ 0.37
CTDSP1-201ENST00000273062 COL4A1P02462 1669 aa17.39■□□□□ 0.37
CTDSP1-201ENST00000273062 DPPA5A6NC42 116 aa17.39■□□□□ 0.37
CTDSP1-201ENST00000273062 SPDYE5A6NIY4 337 aa17.39■□□□□ 0.37
CTDSP1-201ENST00000273062 GPAA1O43292 621 aa17.39■□□□□ 0.37
CTDSP1-201ENST00000273062 IDH1O75874 414 aaKnown RBP17.39■□□□□ 0.37
CTDSP1-201ENST00000273062 RNF8O76064 485 aa17.39■□□□□ 0.37
CTDSP1-201ENST00000273062 MAP3K12Q12852 859 aa17.39■□□□□ 0.37
CTDSP1-201ENST00000273062 DPYDQ12882 1025 aa17.39■□□□□ 0.37
CTDSP1-201ENST00000273062 TRADDQ15628 312 aa17.39■□□□□ 0.37
CTDSP1-201ENST00000273062 CACNA2D3Q8IZS8 1091 aa17.39■□□□□ 0.37
CTDSP1-201ENST00000273062 TSC22D3Q99576 134 aa17.39■□□□□ 0.37
CTDSP1-201ENST00000273062 NDST4Q9H3R1 872 aa17.39■□□□□ 0.37
CTDSP1-201ENST00000273062 HPS5Q9UPZ3 1129 aa17.39■□□□□ 0.37
CTDSP1-201ENST00000273062 AKAP11Q9UKA4 1901 aa17.39■□□□□ 0.37
CTDSP1-201ENST00000273062 PPFIA2O75334 1257 aa17.38■□□□□ 0.37
CTDSP1-201ENST00000273062 HMGB1P09429 215 aaKnown RBP17.38■□□□□ 0.37
CTDSP1-201ENST00000273062 ROR2Q01974 943 aaKnown RBP17.38■□□□□ 0.37
CTDSP1-201ENST00000273062 KCTD19Q17RG1 926 aaPredicted RBP17.38■□□□□ 0.37
CTDSP1-201ENST00000273062 PPP1R15BQ5SWA1 713 aa17.38■□□□□ 0.37
CTDSP1-201ENST00000273062 SPATA1Q5VX52 437 aa17.38■□□□□ 0.37
CTDSP1-201ENST00000273062 CRELD2Q6UXH1 353 aaPredicted RBP17.38■□□□□ 0.37
CTDSP1-201ENST00000273062 APPBP2Q92624 585 aa17.38■□□□□ 0.37
CTDSP1-201ENST00000273062 NIP7Q9Y221 180 aaKnown RBP eCLIP17.38■□□□□ 0.37
CTDSP1-201ENST00000273062 MYO5AQ9Y4I1 1855 aaKnown RBP17.38■□□□□ 0.37
CTDSP1-201ENST00000273062 B4DLN1 442 aa17.38■□□□□ 0.37
CTDSP1-201ENST00000273062 GLI1P08151 1106 aa17.38■□□□□ 0.37
CTDSP1-201ENST00000273062 KRT31Q15323 416 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms