RNA–Protein interactions for RNA: ENST00000272930.8

UBE2F-201, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2F, Length 2,009 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-201ENST00000272930 LRWD1Q9UFC0 647 aa22.72■■□□□ 1.23
UBE2F-201ENST00000272930 HERC5Q9UII4 1024 aaKnown RBP22.72■■□□□ 1.23
UBE2F-201ENST00000272930 SYNPO2Q9UMS6 1093 aa22.72■■□□□ 1.23
UBE2F-201ENST00000272930 GCFC2P16383 781 aaKnown RBP22.71■■□□□ 1.23
UBE2F-201ENST00000272930 RRP1BQ14684 758 aaKnown RBP22.71■■□□□ 1.23
UBE2F-201ENST00000272930 FILIP1LQ4L180 1135 aa22.71■■□□□ 1.23
UBE2F-201ENST00000272930 FCHSD1Q86WN1 690 aa22.71■■□□□ 1.23
UBE2F-201ENST00000272930 TMOD2Q9NZR1 351 aa22.71■■□□□ 1.23
UBE2F-201ENST00000272930 GOLGB1Q14789 3259 aaKnown RBP22.71■■□□□ 1.23
UBE2F-201ENST00000272930 PSMD14O00487 310 aa22.7■■□□□ 1.23
UBE2F-201ENST00000272930 RAD21O60216 631 aa22.7■■□□□ 1.23
UBE2F-201ENST00000272930 NDUFB10O96000 172 aa22.7■■□□□ 1.23
UBE2F-201ENST00000272930 GH2P01242 217 aa22.7■■□□□ 1.23
UBE2F-201ENST00000272930 GRB10Q13322 594 aa22.7■■□□□ 1.23
UBE2F-201ENST00000272930 LARGE2Q8N3Y3 721 aa22.7■■□□□ 1.23
UBE2F-201ENST00000272930 NAP1L4Q99733 375 aaKnown RBP22.7■■□□□ 1.23
UBE2F-201ENST00000272930 VPS33BQ9H267 617 aa22.7■■□□□ 1.23
UBE2F-201ENST00000272930 STK17AQ9UEE5 414 aa22.7■■□□□ 1.23
UBE2F-201ENST00000272930 PCDHA1Q9Y5I3 950 aa22.7■■□□□ 1.23
UBE2F-201ENST00000272930 H7C1D1 291 aa22.7■■□□□ 1.22
UBE2F-201ENST00000272930 ARHGAP6O43182 974 aa22.7■■□□□ 1.22
UBE2F-201ENST00000272930 CCP110O43303 1012 aa22.7■■□□□ 1.22
UBE2F-201ENST00000272930 DPEP1P16444 411 aa22.7■■□□□ 1.22
UBE2F-201ENST00000272930 BAG6P46379 1132 aa22.7■■□□□ 1.22
UBE2F-201ENST00000272930 AMPD3Q01432 767 aa22.7■■□□□ 1.22
UBE2F-201ENST00000272930 KRT31Q15323 416 aa22.7■■□□□ 1.22
UBE2F-201ENST00000272930 DDX25Q9UHL0 483 aaKnown RBP22.7■■□□□ 1.22
UBE2F-201ENST00000272930 HDAC9Q9UKV0 1011 aa22.7■■□□□ 1.22
UBE2F-201ENST00000272930 MAPK8IP1Q9UQF2 711 aa22.7■■□□□ 1.22
UBE2F-201ENST00000272930 STX10O60499 249 aa22.69■■□□□ 1.22
UBE2F-201ENST00000272930 COBLO75128 1261 aa22.69■■□□□ 1.22
UBE2F-201ENST00000272930 SLC16A10Q8TF71 515 aa22.69■■□□□ 1.22
UBE2F-201ENST00000272930 PNMA5Q96PV4 448 aa22.69■■□□□ 1.22
UBE2F-201ENST00000272930 GTPBP4Q9BZE4 634 aaKnown RBP22.69■■□□□ 1.22
UBE2F-201ENST00000272930 RAD17O75943 681 aa22.69■■□□□ 1.22
UBE2F-201ENST00000272930 STIM1Q13586 685 aa22.69■■□□□ 1.22
UBE2F-201ENST00000272930 TCP11X2Q5H9J9 407 aa22.69■■□□□ 1.22
UBE2F-201ENST00000272930 FAM151AQ8WW52 585 aa22.69■■□□□ 1.22
UBE2F-201ENST00000272930 BAG1Q99933 345 aaPredicted RBP22.69■■□□□ 1.22
UBE2F-201ENST00000272930 ZNF277Q9NRM2 450 aaPredicted RBP22.69■■□□□ 1.22
UBE2F-201ENST00000272930 BLOC1S4Q9NUP1 217 aa22.69■■□□□ 1.22
UBE2F-201ENST00000272930 ZNF70Q9UC06 446 aaPredicted RBP22.69■■□□□ 1.22
UBE2F-201ENST00000272930 ITIH6Q6UXX5 1313 aa22.68■■□□□ 1.22
UBE2F-201ENST00000272930 BTNL9Q6UXG8 535 aa22.68■■□□□ 1.22
UBE2F-201ENST00000272930 HAS1Q92839 578 aa22.68■■□□□ 1.22
UBE2F-201ENST00000272930 CCDC47Q96A33 483 aaKnown RBP22.68■■□□□ 1.22
UBE2F-201ENST00000272930 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.68■■□□□ 1.22
UBE2F-201ENST00000272930 POTEMA6NI47 508 aa22.67■■□□□ 1.22
UBE2F-201ENST00000272930 TCP10L2B9ZVM9 353 aa22.67■■□□□ 1.22
UBE2F-201ENST00000272930 PSMA7O14818 248 aa22.67■■□□□ 1.22
UBE2F-201ENST00000272930 CTIFO43310 598 aaKnown RBP22.67■■□□□ 1.22
UBE2F-201ENST00000272930 ADKP55263 362 aaKnown RBP22.67■■□□□ 1.22
UBE2F-201ENST00000272930 DLGAP5Q15398 846 aa22.67■■□□□ 1.22
UBE2F-201ENST00000272930 DEFB132Q7Z7B7 95 aa22.67■■□□□ 1.22
UBE2F-201ENST00000272930 DHTKD1Q96HY7 919 aaPredicted RBP22.67■■□□□ 1.22
UBE2F-201ENST00000272930 AMNQ9BXJ7 453 aa22.67■■□□□ 1.22
UBE2F-201ENST00000272930 KCNJ18B7U540 433 aa22.67■■□□□ 1.22
UBE2F-201ENST00000272930 USP17L15C9J2P7 530 aa22.67■■□□□ 1.22
UBE2F-201ENST00000272930 USP17L13C9JLJ4 530 aa22.67■■□□□ 1.22
UBE2F-201ENST00000272930 USP17L11C9JVI0 530 aa22.67■■□□□ 1.22
UBE2F-201ENST00000272930 USP17L18D6R9N7 530 aa22.67■■□□□ 1.22
UBE2F-201ENST00000272930 USP17L22D6RA61 530 aa22.67■■□□□ 1.22
UBE2F-201ENST00000272930 USP17L17D6RBQ6 530 aa22.67■■□□□ 1.22
UBE2F-201ENST00000272930 USP17L19D6RCP7 530 aa22.67■■□□□ 1.22
UBE2F-201ENST00000272930 USP17L20D6RJB6 530 aa22.67■■□□□ 1.22
UBE2F-201ENST00000272930 TUBB4AP04350 444 aa22.67■■□□□ 1.22
UBE2F-201ENST00000272930 BMP3P12645 472 aa22.67■■□□□ 1.22
UBE2F-201ENST00000272930 USP11P51784 963 aa22.67■■□□□ 1.22
UBE2F-201ENST00000272930 COPB1P53618 953 aaKnown RBP22.67■■□□□ 1.22
UBE2F-201ENST00000272930 USP17L24Q0WX57 530 aa22.67■■□□□ 1.22
UBE2F-201ENST00000272930 AP3B2Q13367 1082 aa22.67■■□□□ 1.22
UBE2F-201ENST00000272930 KCNJ12Q14500 433 aa22.67■■□□□ 1.22
UBE2F-201ENST00000272930 SPDYE2Q495Y8 402 aa22.67■■□□□ 1.22
UBE2F-201ENST00000272930 SYDE2Q5VT97 1194 aa22.67■■□□□ 1.22
UBE2F-201ENST00000272930 USP17L6PQ6QN14 398 aa22.67■■□□□ 1.22
UBE2F-201ENST00000272930 OGFOD1Q8N543 542 aa22.67■■□□□ 1.22
UBE2F-201ENST00000272930 ANKRD20A12PQ8NF67 263 aa22.67■■□□□ 1.22
UBE2F-201ENST00000272930 PANX2Q96RD6 677 aa22.67■■□□□ 1.22
UBE2F-201ENST00000272930 NUP88Q99567 741 aaPredicted RBP22.67■■□□□ 1.22
UBE2F-201ENST00000272930 CNTNAP1P78357 1384 aa22.66■■□□□ 1.22
UBE2F-201ENST00000272930 A0A1W2PRG0 241 aa22.66■■□□□ 1.22
UBE2F-201ENST00000272930 CLRN2A0PK11 232 aa22.66■■□□□ 1.22
UBE2F-201ENST00000272930 TRIM49BA6NDI0 452 aa22.66■■□□□ 1.22
UBE2F-201ENST00000272930 AKR1B15C9JRZ8 316 aaPredicted RBP22.66■■□□□ 1.22
UBE2F-201ENST00000272930 MEIS2O14770 477 aa22.66■■□□□ 1.22
UBE2F-201ENST00000272930 PPP1R2P41236 205 aa22.66■■□□□ 1.22
UBE2F-201ENST00000272930 PMS1P54277 932 aaKnown RBP22.66■■□□□ 1.22
UBE2F-201ENST00000272930 ASIC1P78348 528 aa22.66■■□□□ 1.22
UBE2F-201ENST00000272930 SF3B2Q13435 895 aaKnown RBP22.66■■□□□ 1.22
UBE2F-201ENST00000272930 COBLL1Q53SF7 1204 aa22.66■■□□□ 1.22
UBE2F-201ENST00000272930 SV2BQ7L1I2 683 aa22.66■■□□□ 1.22
UBE2F-201ENST00000272930 IRF2BP1Q8IU81 584 aa22.66■■□□□ 1.22
UBE2F-201ENST00000272930 ANO3Q9BYT9 981 aa22.66■■□□□ 1.22
UBE2F-201ENST00000272930 EXOC1Q9NV70 894 aa22.66■■□□□ 1.22
UBE2F-201ENST00000272930 PDE4DQ08499 809 aa22.65■■□□□ 1.22
UBE2F-201ENST00000272930 TMEM119Q4V9L6 283 aa22.65■■□□□ 1.22
UBE2F-201ENST00000272930 FKBP1CQ5VVH2 108 aa22.65■■□□□ 1.22
UBE2F-201ENST00000272930 KRT79Q5XKE5 535 aa22.65■■□□□ 1.22
UBE2F-201ENST00000272930 MCTP2Q6DN12 878 aa22.65■■□□□ 1.22
UBE2F-201ENST00000272930 TTI2Q6NXR4 508 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms