RNA–Protein interactions for RNA: ENST00000270349.11

SLC6A3-201, Transcript of solute carrier family 6 member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A3, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A3-201ENST00000270349 PCDHA12Q9UN75 941 aa13.25□□□□□ -0.29
SLC6A3-201ENST00000270349 SV2BQ7L1I2 683 aa13.25□□□□□ -0.29
SLC6A3-201ENST00000270349 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.25□□□□□ -0.29
SLC6A3-201ENST00000270349 SCN9AQ15858 1988 aa13.25□□□□□ -0.29
SLC6A3-201ENST00000270349 CCT6AP40227 531 aaKnown RBP13.25□□□□□ -0.29
SLC6A3-201ENST00000270349 NRXN2Q9P2S2 1712 aa13.24□□□□□ -0.29
SLC6A3-201ENST00000270349 POTEMA6NI47 508 aa13.24□□□□□ -0.29
SLC6A3-201ENST00000270349 SKILP12757 684 aa13.24□□□□□ -0.29
SLC6A3-201ENST00000270349 PDE4DQ08499 809 aa13.24□□□□□ -0.29
SLC6A3-201ENST00000270349 MKL1Q969V6 931 aa13.24□□□□□ -0.29
SLC6A3-201ENST00000270349 TRIM47Q96LD4 638 aa13.24□□□□□ -0.29
SLC6A3-201ENST00000270349 PCMTD1Q96MG8 357 aaPredicted RBP13.24□□□□□ -0.29
SLC6A3-201ENST00000270349 TCEAL9Q9UHQ7 104 aa13.24□□□□□ -0.29
SLC6A3-201ENST00000270349 PTPN21Q16825 1174 aa13.24□□□□□ -0.29
SLC6A3-201ENST00000270349 CDAN1Q8IWY9 1227 aa13.24□□□□□ -0.29
SLC6A3-201ENST00000270349 EHMT1Q9H9B1 1298 aa13.24□□□□□ -0.29
SLC6A3-201ENST00000270349 PSMA7O14818 248 aa13.24□□□□□ -0.29
SLC6A3-201ENST00000270349 OFD1O75665 1012 aa13.24□□□□□ -0.29
SLC6A3-201ENST00000270349 MORC3Q14149 939 aa13.24□□□□□ -0.29
SLC6A3-201ENST00000270349 DYMQ7RTS9 669 aa13.24□□□□□ -0.29
SLC6A3-201ENST00000270349 PICK1Q9NRD5 415 aa13.24□□□□□ -0.29
SLC6A3-201ENST00000270349 HOMER2Q9NSB8 354 aa13.24□□□□□ -0.29
SLC6A3-201ENST00000270349 PRR12Q9ULL5 1215 aa13.24□□□□□ -0.29
SLC6A3-201ENST00000270349 DDX60LQ5H9U9 1706 aaKnown RBP13.24□□□□□ -0.29
SLC6A3-201ENST00000270349 ECM29Q5VYK3 1845 aa13.24□□□□□ -0.29
SLC6A3-201ENST00000270349 TAL1P17542 331 aaPredicted RBP13.23□□□□□ -0.29
SLC6A3-201ENST00000270349 PRPHP41219 470 aa13.23□□□□□ -0.29
SLC6A3-201ENST00000270349 IL17AQ16552 155 aa13.23□□□□□ -0.29
SLC6A3-201ENST00000270349 KIF4BQ2VIQ3 1234 aa13.23□□□□□ -0.29
SLC6A3-201ENST00000270349 PPFIBP1Q86W92 1011 aa13.23□□□□□ -0.29
SLC6A3-201ENST00000270349 PYCARDQ9ULZ3 195 aa13.23□□□□□ -0.29
SLC6A3-201ENST00000270349 CDC25BP30305 580 aa13.23□□□□□ -0.29
SLC6A3-201ENST00000270349 PAK1Q13153 545 aa13.23□□□□□ -0.29
SLC6A3-201ENST00000270349 CD2APQ9Y5K6 639 aa13.23□□□□□ -0.29
SLC6A3-201ENST00000270349 GCFC2P16383 781 aaKnown RBP13.23□□□□□ -0.29
SLC6A3-201ENST00000270349 FAM83AQ86UY5 434 aa13.23□□□□□ -0.29
SLC6A3-201ENST00000270349 GMCL1P1Q8NEA9 526 aa13.23□□□□□ -0.29
SLC6A3-201ENST00000270349 ERMNQ8TAM6 284 aa13.23□□□□□ -0.29
SLC6A3-201ENST00000270349 CPLX3Q8WVH0 158 aa13.23□□□□□ -0.29
SLC6A3-201ENST00000270349 NELFBQ8WX92 580 aa13.23□□□□□ -0.29
SLC6A3-201ENST00000270349 GMCL1Q96IK5 515 aa13.23□□□□□ -0.29
SLC6A3-201ENST00000270349 SAMSN1Q9NSI8 373 aaKnown RBP13.23□□□□□ -0.29
SLC6A3-201ENST00000270349 TRMT1Q9NXH9 659 aaKnown RBP13.23□□□□□ -0.29
SLC6A3-201ENST00000270349 GOLGB1Q14789 3259 aaKnown RBP13.23□□□□□ -0.29
SLC6A3-201ENST00000270349 A0A1W2PRG0 241 aa13.22□□□□□ -0.29
SLC6A3-201ENST00000270349 N4BP3O15049 544 aa13.22□□□□□ -0.29
SLC6A3-201ENST00000270349 SLC37A4O43826 429 aa13.22□□□□□ -0.29
SLC6A3-201ENST00000270349 UBXN2AP68543 259 aa13.22□□□□□ -0.29
SLC6A3-201ENST00000270349 DPYDQ12882 1025 aa13.22□□□□□ -0.29
SLC6A3-201ENST00000270349 DCAF15Q66K64 600 aa13.22□□□□□ -0.29
SLC6A3-201ENST00000270349 NCAPH2Q6IBW4 605 aa13.22□□□□□ -0.29
SLC6A3-201ENST00000270349 CCDC150Q8NCX0 1101 aa13.22□□□□□ -0.29
SLC6A3-201ENST00000270349 GJA10Q969M2 543 aa13.22□□□□□ -0.29
SLC6A3-201ENST00000270349 GMLQ99445 158 aa13.22□□□□□ -0.29
SLC6A3-201ENST00000270349 NFKBIEO00221 500 aa13.22□□□□□ -0.29
SLC6A3-201ENST00000270349 ZNF500O60304 480 aaPredicted RBP13.22□□□□□ -0.29
SLC6A3-201ENST00000270349 PPP1R11O60927 126 aaPredicted RBP13.22□□□□□ -0.29
SLC6A3-201ENST00000270349 FOSP01100 380 aaPredicted RBP13.22□□□□□ -0.29
SLC6A3-201ENST00000270349 ERCC5P28715 1186 aaPredicted RBP13.22□□□□□ -0.29
SLC6A3-201ENST00000270349 CAP2P40123 477 aa13.22□□□□□ -0.29
SLC6A3-201ENST00000270349 CCDC144BQ3MJ40 725 aa13.22□□□□□ -0.29
SLC6A3-201ENST00000270349 PRAMEF18Q5VWM3 479 aa13.22□□□□□ -0.29
SLC6A3-201ENST00000270349 ELOA2Q8IYF1 753 aaPredicted RBP13.22□□□□□ -0.29
SLC6A3-201ENST00000270349 ENOX1Q8TC92 643 aaKnown RBP13.22□□□□□ -0.29
SLC6A3-201ENST00000270349 CACTINQ8WUQ7 758 aaKnown RBP13.22□□□□□ -0.29
SLC6A3-201ENST00000270349 ADAMTSL1Q8N6G6 1762 aa13.22□□□□□ -0.29
SLC6A3-201ENST00000270349 RPS12P25398 132 aaKnown RBP13.22□□□□□ -0.29
SLC6A3-201ENST00000270349 MDM2Q00987 491 aaPredicted RBP13.22□□□□□ -0.29
SLC6A3-201ENST00000270349 FMR1Q06787 632 aaKnown RBP eCLIP13.22□□□□□ -0.29
SLC6A3-201ENST00000270349 ARID5BQ14865 1188 aa13.22□□□□□ -0.29
SLC6A3-201ENST00000270349 C16orf45Q96MC5 204 aaPredicted RBP13.22□□□□□ -0.29
SLC6A3-201ENST00000270349 CCSER1Q9C0I3 900 aa13.22□□□□□ -0.29
SLC6A3-201ENST00000270349 VCPKMTQ9H867 229 aa13.22□□□□□ -0.29
SLC6A3-201ENST00000270349 GDAQ9Y2T3 454 aa13.22□□□□□ -0.29
SLC6A3-201ENST00000270349 GCOM1H8Y6P7 765 aaPredicted RBP13.21□□□□□ -0.29
SLC6A3-201ENST00000270349 FLOT1O75955 427 aa13.21□□□□□ -0.29
SLC6A3-201ENST00000270349 POLR2MP0CAP2 368 aa13.21□□□□□ -0.29
SLC6A3-201ENST00000270349 HACL1Q9UJ83 578 aa13.21□□□□□ -0.29
SLC6A3-201ENST00000270349 MRPL11Q9Y3B7 192 aaKnown RBP13.21□□□□□ -0.29
SLC6A3-201ENST00000270349 JAG1P78504 1218 aa13.21□□□□□ -0.29
SLC6A3-201ENST00000270349 ARHGAP4P98171 946 aa13.21□□□□□ -0.29
SLC6A3-201ENST00000270349 ORC2Q13416 577 aaPredicted RBP13.21□□□□□ -0.29
SLC6A3-201ENST00000270349 RRP1BQ14684 758 aaKnown RBP13.21□□□□□ -0.29
SLC6A3-201ENST00000270349 FKBP1CQ5VVH2 108 aa13.21□□□□□ -0.29
SLC6A3-201ENST00000270349 SPATA1Q5VX52 437 aa13.21□□□□□ -0.29
SLC6A3-201ENST00000270349 LRRC27Q9C0I9 530 aa13.21□□□□□ -0.29
SLC6A3-201ENST00000270349 DEFB129Q9H1M3 183 aa13.21□□□□□ -0.29
SLC6A3-201ENST00000270349 CCPG1Q9ULG6 757 aa13.21□□□□□ -0.29
SLC6A3-201ENST00000270349 TMX2Q9Y320 296 aa13.21□□□□□ -0.29
SLC6A3-201ENST00000270349 ATRNL1Q5VV63 1379 aa13.21□□□□□ -0.3
SLC6A3-201ENST00000270349 NOVP48745 357 aa13.21□□□□□ -0.3
SLC6A3-201ENST00000270349 CBX1P83916 185 aa13.21□□□□□ -0.3
SLC6A3-201ENST00000270349 AP3B2Q13367 1082 aa13.21□□□□□ -0.3
SLC6A3-201ENST00000270349 C4orf32Q8N8J7 132 aa13.21□□□□□ -0.3
SLC6A3-201ENST00000270349 CUEDC2Q9H467 287 aa13.21□□□□□ -0.3
SLC6A3-201ENST00000270349 FBXO28Q9NVF7 368 aa13.21□□□□□ -0.3
SLC6A3-201ENST00000270349 LTBP1Q14766 1721 aa13.21□□□□□ -0.3
SLC6A3-201ENST00000270349 M0R2N6 131 aa13.2□□□□□ -0.3
SLC6A3-201ENST00000270349 CHMP2AO43633 222 aa13.2□□□□□ -0.3
SLC6A3-201ENST00000270349 ALAS1P13196 640 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms