RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 RETREG2Q8NC44 543 aa30.62■■■□□ 2.49
CBX4-201ENST00000269397 NOC3LQ8WTT2 800 aaKnown RBP30.62■■■□□ 2.49
CBX4-201ENST00000269397 CYTH3O43739 400 aa30.61■■■□□ 2.49
CBX4-201ENST00000269397 GOLGA8HP0CJ92 632 aa30.61■■■□□ 2.49
CBX4-201ENST00000269397 CCT5P48643 541 aa30.61■■■□□ 2.49
CBX4-201ENST00000269397 SLC39A2Q9NP94 309 aa30.61■■■□□ 2.49
CBX4-201ENST00000269397 NCK2O43639 380 aa30.61■■■□□ 2.49
CBX4-201ENST00000269397 ATP2B2Q01814 1243 aa30.61■■■□□ 2.49
CBX4-201ENST00000269397 CELF1Q92879 486 aaKnown RBP30.61■■■□□ 2.49
CBX4-201ENST00000269397 PCDHA13Q9Y5I0 950 aa30.61■■■□□ 2.49
CBX4-201ENST00000269397 FLT1P17948 1338 aa30.61■■■□□ 2.49
CBX4-201ENST00000269397 LETM2Q2VYF4 491 aa30.6■■■□□ 2.49
CBX4-201ENST00000269397 JRKLQ9Y4A0 524 aa30.6■■■□□ 2.49
CBX4-201ENST00000269397 IRAK1P51617 712 aa30.6■■■□□ 2.49
CBX4-201ENST00000269397 SPATA4Q8NEY3 305 aa30.6■■■□□ 2.49
CBX4-201ENST00000269397 BICDL2A1A5D9 508 aa30.6■■■□□ 2.49
CBX4-201ENST00000269397 ADAMTS2O95450 1211 aa30.6■■■□□ 2.49
CBX4-201ENST00000269397 EIF4A3P38919 411 aaKnown RBP30.6■■■□□ 2.49
CBX4-201ENST00000269397 IQCEQ6IPM2 695 aa30.6■■■□□ 2.49
CBX4-201ENST00000269397 CCDC70Q6NSX1 233 aa30.6■■■□□ 2.49
CBX4-201ENST00000269397 TRIM58Q8NG06 486 aa30.6■■■□□ 2.49
CBX4-201ENST00000269397 DEF6Q9H4E7 631 aa30.6■■■□□ 2.49
CBX4-201ENST00000269397 EFCC1Q9HA90 598 aa30.6■■■□□ 2.49
CBX4-201ENST00000269397 TCP11L1Q9NUJ3 509 aa30.6■■■□□ 2.49
CBX4-201ENST00000269397 MAD2L2Q9UI95 211 aa30.6■■■□□ 2.49
CBX4-201ENST00000269397 TACC1O75410 805 aa30.59■■■□□ 2.49
CBX4-201ENST00000269397 CERS3Q8IU89 383 aa30.59■■■□□ 2.49
CBX4-201ENST00000269397 SEMA6BQ9H3T3 888 aa30.59■■■□□ 2.49
CBX4-201ENST00000269397 SH2D4AQ9H788 454 aa30.59■■■□□ 2.49
CBX4-201ENST00000269397 SH3GLB2Q9NR46 395 aa30.59■■■□□ 2.49
CBX4-201ENST00000269397 CCNT1O60563 726 aaKnown RBP30.59■■■□□ 2.49
CBX4-201ENST00000269397 TECP42680 631 aa30.59■■■□□ 2.49
CBX4-201ENST00000269397 KIF11P52732 1056 aa30.59■■■□□ 2.49
CBX4-201ENST00000269397 KIAA0895Q8NCT3 520 aa30.59■■■□□ 2.49
CBX4-201ENST00000269397 MMRN2Q9H8L6 949 aa30.59■■■□□ 2.49
CBX4-201ENST00000269397 USO1O60763 962 aaKnown RBP30.58■■■□□ 2.49
CBX4-201ENST00000269397 MYL1P05976 194 aa30.58■■■□□ 2.49
CBX4-201ENST00000269397 ITPK1Q13572 414 aa30.58■■■□□ 2.49
CBX4-201ENST00000269397 BICDL1Q6ZP65 573 aa30.58■■■□□ 2.49
CBX4-201ENST00000269397 FNBP4Q8N3X1 1017 aaPredicted RBP30.58■■■□□ 2.49
CBX4-201ENST00000269397 ERGIC2Q96RQ1 377 aa30.58■■■□□ 2.49
CBX4-201ENST00000269397 OSBPL9Q96SU4 736 aa30.58■■■□□ 2.49
CBX4-201ENST00000269397 ATP8A2Q9NTI2 1148 aa30.58■■■□□ 2.49
CBX4-201ENST00000269397 FAM114A1Q8IWE2 563 aa30.58■■■□□ 2.49
CBX4-201ENST00000269397 ARPP21Q9UBL0 812 aaPredicted RBP30.58■■■□□ 2.49
CBX4-201ENST00000269397 MMGT1Q8N4V1 131 aa30.57■■■□□ 2.48
CBX4-201ENST00000269397 TSEN2Q8NCE0 465 aaKnown RBP30.57■■■□□ 2.48
CBX4-201ENST00000269397 PPM1EQ8WY54 764 aa30.57■■■□□ 2.48
CBX4-201ENST00000269397 TSGA10Q9BZW7 698 aa30.57■■■□□ 2.48
CBX4-201ENST00000269397 SALL4Q9UJQ4 1053 aa30.57■■■□□ 2.48
CBX4-201ENST00000269397 STXBP3O00186 592 aa30.57■■■□□ 2.48
CBX4-201ENST00000269397 AKR1B10O60218 316 aa30.57■■■□□ 2.48
CBX4-201ENST00000269397 SHOX2O60902 331 aaPredicted RBP30.57■■■□□ 2.48
CBX4-201ENST00000269397 ZSCAN29Q8IWY8 852 aaPredicted RBP30.57■■■□□ 2.48
CBX4-201ENST00000269397 CCDC47Q96A33 483 aaKnown RBP30.57■■■□□ 2.48
CBX4-201ENST00000269397 BSDC1Q9NW68 430 aaPredicted RBP30.57■■■□□ 2.48
CBX4-201ENST00000269397 PLAGL2Q9UPG8 496 aa30.57■■■□□ 2.48
CBX4-201ENST00000269397 ABCA3Q99758 1704 aa30.57■■■□□ 2.48
CBX4-201ENST00000269397 AMOTL1Q8IY63 956 aa30.56■■■□□ 2.48
CBX4-201ENST00000269397 IPO4Q8TEX9 1081 aaKnown RBP30.56■■■□□ 2.48
CBX4-201ENST00000269397 STX8Q9UNK0 236 aa30.56■■■□□ 2.48
CBX4-201ENST00000269397 SLC44A5Q8NCS7 719 aa30.56■■■□□ 2.48
CBX4-201ENST00000269397 POLD4Q9HCU8 107 aa30.56■■■□□ 2.48
CBX4-201ENST00000269397 DNA2P51530 1060 aa30.55■■■□□ 2.48
CBX4-201ENST00000269397 CCDC181Q5TID7 509 aa30.55■■■□□ 2.48
CBX4-201ENST00000269397 RRAGAQ7L523 313 aa30.55■■■□□ 2.48
CBX4-201ENST00000269397 OR52Z1P0C646 297 aa30.55■■■□□ 2.48
CBX4-201ENST00000269397 CAPS2Q9BXY5 557 aa30.55■■■□□ 2.48
CBX4-201ENST00000269397 BARHL2Q9NY43 387 aa30.55■■■□□ 2.48
CBX4-201ENST00000269397 GRM4Q14833 912 aa30.54■■■□□ 2.48
CBX4-201ENST00000269397 MICALL1Q8N3F8 863 aa30.54■■■□□ 2.48
CBX4-201ENST00000269397 BCAS4Q8TDM0 211 aa30.54■■■□□ 2.48
CBX4-201ENST00000269397 ARL8AQ96BM9 186 aa30.54■■■□□ 2.48
CBX4-201ENST00000269397 PHLPP1O60346 1717 aa30.54■■■□□ 2.48
CBX4-201ENST00000269397 A0A1W2PQJ5 194 aa30.54■■■□□ 2.48
CBX4-201ENST00000269397 LRRC53A6NM62 1247 aa30.54■■■□□ 2.48
CBX4-201ENST00000269397 BUB1O43683 1085 aa30.54■■■□□ 2.48
CBX4-201ENST00000269397 GNGT1P63211 74 aa30.54■■■□□ 2.48
CBX4-201ENST00000269397 SMIM5Q71RC9 77 aa30.54■■■□□ 2.48
CBX4-201ENST00000269397 FBXO33Q7Z6M2 555 aa30.54■■■□□ 2.48
CBX4-201ENST00000269397 CCDC155Q8N6L0 562 aa30.54■■■□□ 2.48
CBX4-201ENST00000269397 MS4A14Q96JA4 679 aa30.54■■■□□ 2.48
CBX4-201ENST00000269397 NDST4Q9H3R1 872 aa30.54■■■□□ 2.48
CBX4-201ENST00000269397 MKNK2Q9HBH9 465 aa30.54■■■□□ 2.48
CBX4-201ENST00000269397 CDK17Q00537 523 aa30.53■■■□□ 2.48
CBX4-201ENST00000269397 DYMQ7RTS9 669 aa30.53■■■□□ 2.48
CBX4-201ENST00000269397 LOC102724428A0A0B4J2F2 783 aa30.53■■■□□ 2.48
CBX4-201ENST00000269397 SIK1P57059 783 aa30.53■■■□□ 2.48
CBX4-201ENST00000269397 VWA3BQ502W6 1294 aa30.53■■■□□ 2.48
CBX4-201ENST00000269397 C7orf25Q9BPX7 421 aa30.53■■■□□ 2.48
CBX4-201ENST00000269397 SIK3Q9Y2K2 1263 aa30.53■■■□□ 2.48
CBX4-201ENST00000269397 ZPR1O75312 459 aa30.52■■■□□ 2.48
CBX4-201ENST00000269397 GFPT1Q06210 699 aaPredicted RBP30.52■■■□□ 2.48
CBX4-201ENST00000269397 PPFIA1Q13136 1202 aa30.52■■■□□ 2.48
CBX4-201ENST00000269397 HAUS3Q68CZ6 603 aa30.52■■■□□ 2.48
CBX4-201ENST00000269397 TMC4Q7Z404 712 aa30.52■■■□□ 2.48
CBX4-201ENST00000269397 SBK1Q52WX2 424 aa30.52■■■□□ 2.48
CBX4-201ENST00000269397 FIGNQ5HY92 759 aa30.52■■■□□ 2.48
CBX4-201ENST00000269397 DGKHQ86XP1 1220 aa30.52■■■□□ 2.48
CBX4-201ENST00000269397 EFCAB13Q8IY85 973 aa30.52■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms