RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 SELENOSQ9BQE4 189 aa16.99■□□□□ 0.31
TIMP3-201ENST00000266085 PABPN1LA6NDY0 278 aaKnown RBP16.99■□□□□ 0.31
TIMP3-201ENST00000266085 IVLP07476 585 aa16.99■□□□□ 0.31
TIMP3-201ENST00000266085 LIG4P49917 911 aa16.99■□□□□ 0.31
TIMP3-201ENST00000266085 TDRD7Q8NHU6 1098 aaKnown RBP16.99■□□□□ 0.31
TIMP3-201ENST00000266085 PLEKHG2Q9H7P9 1386 aa16.99■□□□□ 0.31
TIMP3-201ENST00000266085 ZEB2O60315 1214 aa16.98■□□□□ 0.31
TIMP3-201ENST00000266085 U2AF2P26368 475 aaKnown RBP eCLIP16.98■□□□□ 0.31
TIMP3-201ENST00000266085 DPCR1Q3MIW9 517 aa16.98■□□□□ 0.31
TIMP3-201ENST00000266085 ZBTB8OSQ8IWT0 167 aa16.98■□□□□ 0.31
TIMP3-201ENST00000266085 GRAMD1CQ8IYS0 662 aa16.98■□□□□ 0.31
TIMP3-201ENST00000266085 UBLCP1Q8WVY7 318 aaPredicted RBP16.98■□□□□ 0.31
TIMP3-201ENST00000266085 SF3B3Q15393 1217 aaKnown RBP16.98■□□□□ 0.31
TIMP3-201ENST00000266085 ALX1Q15699 326 aa16.98■□□□□ 0.31
TIMP3-201ENST00000266085 GPR161Q8N6U8 529 aaKnown RBP16.98■□□□□ 0.31
TIMP3-201ENST00000266085 CCDC127Q96BQ5 260 aa16.98■□□□□ 0.31
TIMP3-201ENST00000266085 H0YCG3 227 aa16.98■□□□□ 0.31
TIMP3-201ENST00000266085 M0QZ92 97 aa16.98■□□□□ 0.31
TIMP3-201ENST00000266085 NMT2O60551 498 aa16.98■□□□□ 0.31
TIMP3-201ENST00000266085 ATP2C2O75185 946 aa16.98■□□□□ 0.31
TIMP3-201ENST00000266085 GBP6Q6ZN66 633 aa16.98■□□□□ 0.31
TIMP3-201ENST00000266085 ENAHQ8N8S7 591 aaPredicted RBP16.98■□□□□ 0.31
TIMP3-201ENST00000266085 MYRIPQ8NFW9 859 aa16.98■□□□□ 0.31
TIMP3-201ENST00000266085 MROH7-TTC4A0A0A0MT08 1334 aa16.98■□□□□ 0.31
TIMP3-201ENST00000266085 LRRIQ4A6NIV6 560 aa16.98■□□□□ 0.31
TIMP3-201ENST00000266085 CFAP221Q4G0U5 840 aa16.98■□□□□ 0.31
TIMP3-201ENST00000266085 TBC1D10BQ4KMP7 808 aaPredicted RBP16.98■□□□□ 0.31
TIMP3-201ENST00000266085 SP8Q8IXZ3 490 aa16.98■□□□□ 0.31
TIMP3-201ENST00000266085 PSMD1Q99460 953 aa16.98■□□□□ 0.31
TIMP3-201ENST00000266085 ZNF277Q9NRM2 450 aaPredicted RBP16.98■□□□□ 0.31
TIMP3-201ENST00000266085 CD163L1Q9NR16 1453 aa16.97■□□□□ 0.31
TIMP3-201ENST00000266085 CEMIPQ8WUJ3 1361 aa16.97■□□□□ 0.31
TIMP3-201ENST00000266085 PNMA6FA0A0J9YX94 578 aa16.97■□□□□ 0.31
TIMP3-201ENST00000266085 FAM170AA1A519 330 aa16.97■□□□□ 0.31
TIMP3-201ENST00000266085 ELF2Q15723 593 aa16.97■□□□□ 0.31
TIMP3-201ENST00000266085 SMYD4Q8IYR2 804 aaPredicted RBP16.97■□□□□ 0.31
TIMP3-201ENST00000266085 OTUD6BQ8N6M0 293 aa16.97■□□□□ 0.31
TIMP3-201ENST00000266085 LINC00116Q8NCU8 138 aa16.97■□□□□ 0.31
TIMP3-201ENST00000266085 DESI2Q9BSY9 194 aa16.97■□□□□ 0.31
TIMP3-201ENST00000266085 ZNF341Q9BYN7 854 aa16.97■□□□□ 0.31
TIMP3-201ENST00000266085 RSPH14Q9UHP6 348 aa16.97■□□□□ 0.31
TIMP3-201ENST00000266085 COBLO75128 1261 aa16.97■□□□□ 0.31
TIMP3-201ENST00000266085 POLGP54098 1239 aaPredicted RBP16.97■□□□□ 0.31
TIMP3-201ENST00000266085 PRR5LQ6MZQ0 368 aa16.97■□□□□ 0.31
TIMP3-201ENST00000266085 IFT20Q8IY31 132 aa16.97■□□□□ 0.31
TIMP3-201ENST00000266085 MB21D2Q8IYB1 491 aaPredicted RBP16.97■□□□□ 0.31
TIMP3-201ENST00000266085 WDR11Q9BZH6 1224 aa16.97■□□□□ 0.31
TIMP3-201ENST00000266085 SSX2IPQ9Y2D8 614 aa16.97■□□□□ 0.31
TIMP3-201ENST00000266085 CCNA1P78396 465 aa16.97■□□□□ 0.31
TIMP3-201ENST00000266085 PDIA6Q15084 440 aa16.97■□□□□ 0.31
TIMP3-201ENST00000266085 ARMCX5Q6P1M9 558 aa16.97■□□□□ 0.31
TIMP3-201ENST00000266085 DPP9Q86TI2 863 aa16.97■□□□□ 0.31
TIMP3-201ENST00000266085 LRRC8AQ8IWT6 810 aa16.97■□□□□ 0.31
TIMP3-201ENST00000266085 CSF1RP07333 972 aa16.97■□□□□ 0.31
TIMP3-201ENST00000266085 ETF1P62495 437 aaKnown RBP16.97■□□□□ 0.31
TIMP3-201ENST00000266085 UTP11Q9Y3A2 253 aaKnown RBP16.97■□□□□ 0.31
TIMP3-201ENST00000266085 SPATA31A5Q5VU36 1347 aa16.96■□□□□ 0.31
TIMP3-201ENST00000266085 SPATA31A7Q8IWB4 1347 aa16.96■□□□□ 0.31
TIMP3-201ENST00000266085 RFX7Q2KHR2 1363 aa16.96■□□□□ 0.31
TIMP3-201ENST00000266085 BARGINQ6ZT62 677 aa16.96■□□□□ 0.31
TIMP3-201ENST00000266085 NRBP2Q9NSY0 501 aa16.96■□□□□ 0.31
TIMP3-201ENST00000266085 IKBKBO14920 756 aa16.96■□□□□ 0.31
TIMP3-201ENST00000266085 CNGA1P29973 690 aa16.96■□□□□ 0.31
TIMP3-201ENST00000266085 HOXA13P31271 388 aaPredicted RBP16.96■□□□□ 0.31
TIMP3-201ENST00000266085 SNAP25P60880 206 aa16.96■□□□□ 0.31
TIMP3-201ENST00000266085 SEPT2Q15019 361 aa16.96■□□□□ 0.31
TIMP3-201ENST00000266085 FAM160B2Q86V87 743 aa16.96■□□□□ 0.31
TIMP3-201ENST00000266085 TRIM58Q8NG06 486 aa16.96■□□□□ 0.31
TIMP3-201ENST00000266085 FAM76AQ8TAV0 307 aa16.96■□□□□ 0.31
TIMP3-201ENST00000266085 SRPRBQ9Y5M8 271 aaKnown RBP16.96■□□□□ 0.31
TIMP3-201ENST00000266085 SAR1BQ9Y6B6 198 aa16.96■□□□□ 0.31
TIMP3-201ENST00000266085 NRXN1Q9ULB1 1477 aa16.96■□□□□ 0.31
TIMP3-201ENST00000266085 UTYO14607 1347 aa16.96■□□□□ 0.31
TIMP3-201ENST00000266085 MYO3BQ8WXR4 1341 aa16.96■□□□□ 0.31
TIMP3-201ENST00000266085 DIP2BQ9P265 1576 aa16.96■□□□□ 0.31
TIMP3-201ENST00000266085 FERP16591 822 aa16.96■□□□□ 0.31
TIMP3-201ENST00000266085 CHRNA5P30532 468 aa16.96■□□□□ 0.31
TIMP3-201ENST00000266085 CCDC63Q8NA47 563 aa16.96■□□□□ 0.31
TIMP3-201ENST00000266085 ATP6V0A1Q93050 837 aa16.96■□□□□ 0.31
TIMP3-201ENST00000266085 CEP95Q96GE4 821 aa16.96■□□□□ 0.31
TIMP3-201ENST00000266085 EPSTI1Q96J88 318 aa16.96■□□□□ 0.31
TIMP3-201ENST00000266085 TUBGCP2Q9BSJ2 902 aa16.96■□□□□ 0.31
TIMP3-201ENST00000266085 CCDC94Q9BW85 323 aaPredicted RBP16.96■□□□□ 0.31
TIMP3-201ENST00000266085 ABCC12Q96J65 1359 aa16.96■□□□□ 0.3
TIMP3-201ENST00000266085 USP17L5A8MUK1 530 aa16.95■□□□□ 0.3
TIMP3-201ENST00000266085 N4BP1O75113 896 aaKnown RBP16.95■□□□□ 0.3
TIMP3-201ENST00000266085 CACNB1Q02641 598 aaPredicted RBP16.95■□□□□ 0.3
TIMP3-201ENST00000266085 DMP1Q13316 513 aaPredicted RBP16.95■□□□□ 0.3
TIMP3-201ENST00000266085 CPLX4Q7Z7G2 160 aa16.95■□□□□ 0.3
TIMP3-201ENST00000266085 TRIM31Q9BZY9 425 aa16.95■□□□□ 0.3
TIMP3-201ENST00000266085 HAUS4Q9H6D7 363 aa16.95■□□□□ 0.3
TIMP3-201ENST00000266085 FAM169AQ9Y6X4 670 aa16.95■□□□□ 0.3
TIMP3-201ENST00000266085 ADGRB1O14514 1584 aa16.95■□□□□ 0.3
TIMP3-201ENST00000266085 FRMPD1Q5SYB0 1578 aa16.95■□□□□ 0.3
TIMP3-201ENST00000266085 DLATP10515 647 aaKnown RBP16.95■□□□□ 0.3
TIMP3-201ENST00000266085 COPB1P53618 953 aaKnown RBP16.95■□□□□ 0.3
TIMP3-201ENST00000266085 DAAM2Q86T65 1068 aa16.95■□□□□ 0.3
TIMP3-201ENST00000266085 ANKS4BQ8N8V4 417 aa16.95■□□□□ 0.3
TIMP3-201ENST00000266085 U2AF1L4Q8WU68 220 aaKnown RBP16.95■□□□□ 0.3
TIMP3-201ENST00000266085 OGFRQ9NZT2 677 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms