RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 NEK11Q8NG66 645 aa16.12■□□□□ 0.17
PDLIM2-201ENST00000265810 PSMD1Q99460 953 aa16.12■□□□□ 0.17
PDLIM2-201ENST00000265810 PHF20Q9BVI0 1012 aa16.12■□□□□ 0.17
PDLIM2-201ENST00000265810 LUC7L2Q9Y383 392 aaKnown RBP16.12■□□□□ 0.17
PDLIM2-201ENST00000265810 LRP6O75581 1613 aa16.12■□□□□ 0.17
PDLIM2-201ENST00000265810 MEIS1O00470 390 aa16.12■□□□□ 0.17
PDLIM2-201ENST00000265810 CCNA1P78396 465 aa16.12■□□□□ 0.17
PDLIM2-201ENST00000265810 EEPD1Q7L9B9 569 aa16.12■□□□□ 0.17
PDLIM2-201ENST00000265810 IGSF22Q8N9C0 903 aa16.12■□□□□ 0.17
PDLIM2-201ENST00000265810 GSDMAQ96QA5 445 aa16.12■□□□□ 0.17
PDLIM2-201ENST00000265810 CNTNAP5Q8WYK1 1306 aa16.11■□□□□ 0.17
PDLIM2-201ENST00000265810 GRIN3BO60391 1043 aa16.11■□□□□ 0.17
PDLIM2-201ENST00000265810 U2AF2P26368 475 aaKnown RBP eCLIP16.11■□□□□ 0.17
PDLIM2-201ENST00000265810 DNA2P51530 1060 aa16.11■□□□□ 0.17
PDLIM2-201ENST00000265810 SNRNP48Q6IEG0 339 aaKnown RBP16.11■□□□□ 0.17
PDLIM2-201ENST00000265810 SMYD4Q8IYR2 804 aaPredicted RBP16.11■□□□□ 0.17
PDLIM2-201ENST00000265810 PANK4Q9NVE7 773 aa16.11■□□□□ 0.17
PDLIM2-201ENST00000265810 FANCLQ9NW38 375 aa16.11■□□□□ 0.17
PDLIM2-201ENST00000265810 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.11■□□□□ 0.17
PDLIM2-201ENST00000265810 EPB41P11171 864 aaKnown RBP16.11■□□□□ 0.17
PDLIM2-201ENST00000265810 OTUD6AQ7L8S5 288 aa16.11■□□□□ 0.17
PDLIM2-201ENST00000265810 AGXT2Q9BYV1 514 aa16.11■□□□□ 0.17
PDLIM2-201ENST00000265810 GOLPH3LQ9H4A5 285 aa16.11■□□□□ 0.17
PDLIM2-201ENST00000265810 RABGAP1Q9Y3P9 1069 aa16.11■□□□□ 0.17
PDLIM2-201ENST00000265810 PLCG1P19174 1290 aa16.11■□□□□ 0.17
PDLIM2-201ENST00000265810 RESP18Q5W5W9 173 aa16.11■□□□□ 0.17
PDLIM2-201ENST00000265810 PPP1R18Q6NYC8 613 aa16.11■□□□□ 0.17
PDLIM2-201ENST00000265810 SEPT14Q6ZU15 432 aa16.11■□□□□ 0.17
PDLIM2-201ENST00000265810 GOLGA6L1Q8N7Z2 621 aa16.11■□□□□ 0.17
PDLIM2-201ENST00000265810 RPAP3Q9H6T3 665 aaPredicted RBP16.11■□□□□ 0.17
PDLIM2-201ENST00000265810 SCN11AQ9UI33 1791 aa16.11■□□□□ 0.17
PDLIM2-201ENST00000265810 LRRC37A3O60309 1634 aa16.11■□□□□ 0.17
PDLIM2-201ENST00000265810 ARHGAP4P98171 946 aa16.11■□□□□ 0.17
PDLIM2-201ENST00000265810 SNW1Q13573 536 aaKnown RBP16.11■□□□□ 0.17
PDLIM2-201ENST00000265810 C9orf131Q5VYM1 1079 aa16.11■□□□□ 0.17
PDLIM2-201ENST00000265810 XPO4Q9C0E2 1151 aaKnown RBP16.11■□□□□ 0.17
PDLIM2-201ENST00000265810 PUF60Q9UHX1 559 aaKnown RBP16.11■□□□□ 0.17
PDLIM2-201ENST00000265810 LTBP4Q8N2S1 1624 aa16.1■□□□□ 0.17
PDLIM2-201ENST00000265810 COBLO75128 1261 aa16.1■□□□□ 0.17
PDLIM2-201ENST00000265810 BRDTQ58F21 947 aaPredicted RBP16.1■□□□□ 0.17
PDLIM2-201ENST00000265810 DPP9Q86TI2 863 aa16.1■□□□□ 0.17
PDLIM2-201ENST00000265810 MYOCDQ8IZQ8 938 aa16.1■□□□□ 0.17
PDLIM2-201ENST00000265810 C2orf69Q8N8R5 385 aa16.1■□□□□ 0.17
PDLIM2-201ENST00000265810 WDR11Q9BZH6 1224 aa16.1■□□□□ 0.17
PDLIM2-201ENST00000265810 VCPKMTQ9H867 229 aa16.1■□□□□ 0.17
PDLIM2-201ENST00000265810 ADD3Q9UEY8 706 aaKnown RBP16.1■□□□□ 0.17
PDLIM2-201ENST00000265810 SSR1P43307 286 aaKnown RBP16.1■□□□□ 0.17
PDLIM2-201ENST00000265810 C11orf57Q6ZUT1 292 aaPredicted RBP16.1■□□□□ 0.17
PDLIM2-201ENST00000265810 PDGFDQ9GZP0 370 aaPredicted RBP16.1■□□□□ 0.17
PDLIM2-201ENST00000265810 CUEDC2Q9H467 287 aa16.1■□□□□ 0.17
PDLIM2-201ENST00000265810 MAD2L2Q9UI95 211 aa16.1■□□□□ 0.17
PDLIM2-201ENST00000265810 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.1■□□□□ 0.17
PDLIM2-201ENST00000265810 POTEMA6NI47 508 aa16.1■□□□□ 0.17
PDLIM2-201ENST00000265810 CALUO43852 315 aaPredicted RBP16.1■□□□□ 0.17
PDLIM2-201ENST00000265810 CACNB1Q02641 598 aaPredicted RBP16.1■□□□□ 0.17
PDLIM2-201ENST00000265810 FAM26FQ5R3K3 315 aa16.1■□□□□ 0.17
PDLIM2-201ENST00000265810 LDHDQ86WU2 507 aa16.1■□□□□ 0.17
PDLIM2-201ENST00000265810 TAF4BQ92750 862 aa16.1■□□□□ 0.17
PDLIM2-201ENST00000265810 RMDN3Q96TC7 470 aa16.1■□□□□ 0.17
PDLIM2-201ENST00000265810 TDP2O95551 362 aa16.09■□□□□ 0.17
PDLIM2-201ENST00000265810 MCM6Q14566 821 aa16.09■□□□□ 0.17
PDLIM2-201ENST00000265810 NOLC1Q14978 699 aaKnown RBP eCLIP16.09■□□□□ 0.17
PDLIM2-201ENST00000265810 ZFPM1Q8IX07 1006 aa16.09■□□□□ 0.17
PDLIM2-201ENST00000265810 MAP3K14Q99558 947 aa16.09■□□□□ 0.17
PDLIM2-201ENST00000265810 RNF146Q9NTX7 359 aa16.09■□□□□ 0.17
PDLIM2-201ENST00000265810 AFDNP55196 1824 aaKnown RBP16.09■□□□□ 0.17
PDLIM2-201ENST00000265810 CASQ1P31415 396 aa16.09■□□□□ 0.17
PDLIM2-201ENST00000265810 CYLC1P35663 651 aaPredicted RBP16.09■□□□□ 0.17
PDLIM2-201ENST00000265810 RHBDL3P58872 404 aa16.09■□□□□ 0.17
PDLIM2-201ENST00000265810 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.09■□□□□ 0.17
PDLIM2-201ENST00000265810 ACER1Q8TDN7 264 aa16.09■□□□□ 0.17
PDLIM2-201ENST00000265810 TRERF1Q96PN7 1200 aa16.09■□□□□ 0.17
PDLIM2-201ENST00000265810 JMJD4Q9H9V9 463 aa16.09■□□□□ 0.17
PDLIM2-201ENST00000265810 SLC5A4Q9NY91 659 aa16.09■□□□□ 0.17
PDLIM2-201ENST00000265810 PRR12Q9ULL5 1215 aa16.09■□□□□ 0.17
PDLIM2-201ENST00000265810 GNG11P61952 73 aa16.09■□□□□ 0.17
PDLIM2-201ENST00000265810 FAM102BQ5T8I3 360 aa16.09■□□□□ 0.17
PDLIM2-201ENST00000265810 POTEDQ86YR6 584 aa16.09■□□□□ 0.17
PDLIM2-201ENST00000265810 ELP3Q9H9T3 547 aa16.09■□□□□ 0.17
PDLIM2-201ENST00000265810 PCDHAC2Q9Y5I4 1007 aa16.09■□□□□ 0.17
PDLIM2-201ENST00000265810 TBC1D5Q92609 795 aa16.09■□□□□ 0.17
PDLIM2-201ENST00000265810 MAGEF1Q9HAY2 307 aa16.09■□□□□ 0.17
PDLIM2-201ENST00000265810 RIC8AQ9NPQ8 531 aa16.09■□□□□ 0.17
PDLIM2-201ENST00000265810 WNT10BO00744 389 aa16.08■□□□□ 0.17
PDLIM2-201ENST00000265810 DDNO94850 711 aaPredicted RBP16.08■□□□□ 0.17
PDLIM2-201ENST00000265810 ECE1P42892 770 aa16.08■□□□□ 0.17
PDLIM2-201ENST00000265810 NCBP1Q09161 790 aaKnown RBP16.08■□□□□ 0.17
PDLIM2-201ENST00000265810 ZNF280CQ8ND82 737 aa16.08■□□□□ 0.17
PDLIM2-201ENST00000265810 PAGE5Q96GU1 130 aa16.08■□□□□ 0.17
PDLIM2-201ENST00000265810 IL17RBQ9NRM6 502 aa16.08■□□□□ 0.17
PDLIM2-201ENST00000265810 KDM3BQ7LBC6 1761 aa16.08■□□□□ 0.16
PDLIM2-201ENST00000265810 AKR1B15C9JRZ8 316 aaPredicted RBP16.08■□□□□ 0.16
PDLIM2-201ENST00000265810 EXOC3O60645 756 aa16.08■□□□□ 0.16
PDLIM2-201ENST00000265810 NOP2P46087 812 aaKnown RBP16.08■□□□□ 0.16
PDLIM2-201ENST00000265810 COL9A3Q14050 684 aaPredicted RBP16.08■□□□□ 0.16
PDLIM2-201ENST00000265810 RDH13Q8NBN7 331 aa16.08■□□□□ 0.16
PDLIM2-201ENST00000265810 PKNOX2Q96KN3 472 aa16.08■□□□□ 0.16
PDLIM2-201ENST00000265810 FHDC1Q9C0D6 1143 aaPredicted RBP16.08■□□□□ 0.16
PDLIM2-201ENST00000265810 DISC1Q9NRI5 854 aa16.08■□□□□ 0.16
PDLIM2-201ENST00000265810 STRN3Q13033 797 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms