RNA–Protein interactions for RNA: ENST00000265354.5

SRF-201, Transcript of serum response factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRF, Length 4,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRF-201ENST00000265354 FCER1AP12319 257 aa18.85■□□□□ 0.61
SRF-201ENST00000265354 CCDC170Q8IYT3 715 aa18.85■□□□□ 0.61
SRF-201ENST00000265354 REXO1Q8N1G1 1221 aaKnown RBP18.85■□□□□ 0.61
SRF-201ENST00000265354 MROH5Q6ZUA9 1318 aa18.85■□□□□ 0.61
SRF-201ENST00000265354 MCTP2Q6DN12 878 aa18.85■□□□□ 0.61
SRF-201ENST00000265354 CXorf56Q9H5V9 222 aa18.85■□□□□ 0.61
SRF-201ENST00000265354 USP17L3A6NCW0 530 aa18.85■□□□□ 0.61
SRF-201ENST00000265354 USP17L4A6NCW7 530 aa18.85■□□□□ 0.61
SRF-201ENST00000265354 OR52Z1P0C646 297 aa18.85■□□□□ 0.61
SRF-201ENST00000265354 USP17L1Q7RTZ2 530 aa18.85■□□□□ 0.61
SRF-201ENST00000265354 N4BP2L2Q92802 583 aaPredicted RBP18.85■□□□□ 0.61
SRF-201ENST00000265354 RPGRQ92834 1020 aaKnown RBP18.85■□□□□ 0.61
SRF-201ENST00000265354 SUFUQ9UMX1 484 aa18.85■□□□□ 0.61
SRF-201ENST00000265354 VIRMAQ69YN4 1812 aaKnown RBP18.85■□□□□ 0.61
SRF-201ENST00000265354 MROH2AA6NES4 1674 aa18.85■□□□□ 0.61
SRF-201ENST00000265354 DEPDC5O75140 1603 aa18.85■□□□□ 0.61
SRF-201ENST00000265354 USP17L8P0C7I0 530 aa18.85■□□□□ 0.61
SRF-201ENST00000265354 PPP2R5BQ15173 497 aa18.85■□□□□ 0.61
SRF-201ENST00000265354 LACRTQ9GZZ8 138 aa18.85■□□□□ 0.61
SRF-201ENST00000265354 LONP1P36776 959 aaKnown RBP18.84■□□□□ 0.61
SRF-201ENST00000265354 IRAK1P51617 712 aa18.84■□□□□ 0.61
SRF-201ENST00000265354 HSPA2P54652 639 aa18.84■□□□□ 0.61
SRF-201ENST00000265354 MUM1L1Q5H9M0 696 aa18.84■□□□□ 0.61
SRF-201ENST00000265354 RSRC2Q7L4I2 434 aaKnown RBP18.84■□□□□ 0.61
SRF-201ENST00000265354 CCDC65Q8IXS2 484 aa18.84■□□□□ 0.61
SRF-201ENST00000265354 SPATA4Q8NEY3 305 aa18.84■□□□□ 0.61
SRF-201ENST00000265354 LMBR1Q8WVP7 490 aa18.84■□□□□ 0.61
SRF-201ENST00000265354 ZC3H13Q5T200 1668 aaKnown RBP18.84■□□□□ 0.61
SRF-201ENST00000265354 LGALS16A8MUM7 142 aa18.84■□□□□ 0.61
SRF-201ENST00000265354 ACTN4O43707 911 aaKnown RBP18.84■□□□□ 0.61
SRF-201ENST00000265354 LDHCP07864 332 aa18.84■□□□□ 0.61
SRF-201ENST00000265354 PLEKP08567 350 aaPredicted RBP18.84■□□□□ 0.61
SRF-201ENST00000265354 NDST4Q9H3R1 872 aa18.84■□□□□ 0.61
SRF-201ENST00000265354 DISC1Q9NRI5 854 aa18.84■□□□□ 0.61
SRF-201ENST00000265354 ODF2LQ9ULJ1 636 aa18.84■□□□□ 0.61
SRF-201ENST00000265354 ZBTB21Q9ULJ3 1066 aa18.84■□□□□ 0.61
SRF-201ENST00000265354 HPSEQ9Y251 543 aa18.84■□□□□ 0.61
SRF-201ENST00000265354 HIBCHQ6NVY1 386 aaPredicted RBP18.84■□□□□ 0.61
SRF-201ENST00000265354 GKAP1Q5VSY0 366 aaPredicted RBP18.83■□□□□ 0.61
SRF-201ENST00000265354 DMGDHQ9UI17 866 aaKnown RBP18.83■□□□□ 0.61
SRF-201ENST00000265354 FBF1Q8TES7 1133 aa18.83■□□□□ 0.61
SRF-201ENST00000265354 LRRC27Q9C0I9 530 aa18.83■□□□□ 0.61
SRF-201ENST00000265354 PPP1R1BQ9UD71 204 aaPredicted RBP18.83■□□□□ 0.61
SRF-201ENST00000265354 USP17L2Q6R6M4 530 aa18.83■□□□□ 0.6
SRF-201ENST00000265354 MYOCDQ8IZQ8 938 aa18.83■□□□□ 0.6
SRF-201ENST00000265354 HECW2Q9P2P5 1572 aa18.83■□□□□ 0.6
SRF-201ENST00000265354 HPCAL4Q9UM19 191 aa18.83■□□□□ 0.6
SRF-201ENST00000265354 LRRC53A6NM62 1247 aa18.82■□□□□ 0.6
SRF-201ENST00000265354 MYO1FO00160 1098 aa18.82■□□□□ 0.6
SRF-201ENST00000265354 FAM133BQ5BKY9 247 aaKnown RBP18.82■□□□□ 0.6
SRF-201ENST00000265354 TEX11Q8IYF3 940 aa18.82■□□□□ 0.6
SRF-201ENST00000265354 GOLPH3Q9H4A6 298 aa18.82■□□□□ 0.6
SRF-201ENST00000265354 CCNE1P24864 410 aa18.82■□□□□ 0.6
SRF-201ENST00000265354 CCDC6Q16204 474 aa18.82■□□□□ 0.6
SRF-201ENST00000265354 SETDB2Q96T68 719 aa18.82■□□□□ 0.6
SRF-201ENST00000265354 IRAK4Q9NWZ3 460 aa18.82■□□□□ 0.6
SRF-201ENST00000265354 NEO1Q92859 1461 aa18.82■□□□□ 0.6
SRF-201ENST00000265354 MAP3K15Q6ZN16 1313 aa18.82■□□□□ 0.6
SRF-201ENST00000265354 CTNND1O60716 968 aaKnown RBP18.82■□□□□ 0.6
SRF-201ENST00000265354 OR2W6PQ8NHA6 318 aa18.82■□□□□ 0.6
SRF-201ENST00000265354 OSBPL9Q96SU4 736 aa18.82■□□□□ 0.6
SRF-201ENST00000265354 MAP3K14Q99558 947 aa18.82■□□□□ 0.6
SRF-201ENST00000265354 PPP1R12CQ9BZL4 782 aa18.82■□□□□ 0.6
SRF-201ENST00000265354 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.82■□□□□ 0.6
SRF-201ENST00000265354 RIMBP2O15034 1052 aa18.82■□□□□ 0.6
SRF-201ENST00000265354 PALMO75781 387 aa18.82■□□□□ 0.6
SRF-201ENST00000265354 ZKSCAN8Q15776 578 aaPredicted RBP18.82■□□□□ 0.6
SRF-201ENST00000265354 TRIM68Q6AZZ1 485 aa18.82■□□□□ 0.6
SRF-201ENST00000265354 ZNF579Q8NAF0 562 aaKnown RBP18.82■□□□□ 0.6
SRF-201ENST00000265354 SPATS2LQ9NUQ6 558 aaKnown RBP18.82■□□□□ 0.6
SRF-201ENST00000265354 PRPF3O43395 683 aaKnown RBP18.81■□□□□ 0.6
SRF-201ENST00000265354 CYP4A11Q02928 519 aa18.81■□□□□ 0.6
SRF-201ENST00000265354 DHX9Q08211 1270 aaKnown RBP18.81■□□□□ 0.6
SRF-201ENST00000265354 ADAM9Q13443 819 aa18.81■□□□□ 0.6
SRF-201ENST00000265354 CCNI2Q6ZMN8 369 aaPredicted RBP18.81■□□□□ 0.6
SRF-201ENST00000265354 SGMS1Q86VZ5 419 aa18.81■□□□□ 0.6
SRF-201ENST00000265354 LRRC47Q8N1G4 583 aaKnown RBP18.81■□□□□ 0.6
SRF-201ENST00000265354 CTTNBP2NLQ9P2B4 639 aa18.81■□□□□ 0.6
SRF-201ENST00000265354 PLAAQ9Y263 795 aa18.81■□□□□ 0.6
SRF-201ENST00000265354 HEG1Q9ULI3 1381 aa18.81■□□□□ 0.6
SRF-201ENST00000265354 APBA1Q02410 837 aa18.81■□□□□ 0.6
SRF-201ENST00000265354 EPB41L4AQ9HCS5 686 aaPredicted RBP18.81■□□□□ 0.6
SRF-201ENST00000265354 KIAA1210Q9ULL0 1709 aa18.81■□□□□ 0.6
SRF-201ENST00000265354 SPOPO43791 374 aa18.81■□□□□ 0.6
SRF-201ENST00000265354 PLTPP55058 493 aa18.81■□□□□ 0.6
SRF-201ENST00000265354 PACS2Q86VP3 889 aa18.81■□□□□ 0.6
SRF-201ENST00000265354 TBCKQ8TEA7 893 aa18.81■□□□□ 0.6
SRF-201ENST00000265354 GJA10Q969M2 543 aa18.81■□□□□ 0.6
SRF-201ENST00000265354 COA7Q96BR5 231 aa18.81■□□□□ 0.6
SRF-201ENST00000265354 NSRP1Q9H0G5 558 aaKnown RBP18.81■□□□□ 0.6
SRF-201ENST00000265354 RGS16O15492 202 aaPredicted RBP18.8■□□□□ 0.6
SRF-201ENST00000265354 PLCB3Q01970 1234 aa18.8■□□□□ 0.6
SRF-201ENST00000265354 CALCOCO2Q13137 446 aa18.8■□□□□ 0.6
SRF-201ENST00000265354 CAPN12Q6ZSI9 719 aa18.8■□□□□ 0.6
SRF-201ENST00000265354 NEK8Q86SG6 692 aa18.8■□□□□ 0.6
SRF-201ENST00000265354 CCDC50Q8IVM0 306 aa18.8■□□□□ 0.6
SRF-201ENST00000265354 CCDC105Q8IYK2 499 aa18.8■□□□□ 0.6
SRF-201ENST00000265354 SLC44A5Q8NCS7 719 aa18.8■□□□□ 0.6
SRF-201ENST00000265354 TNFAIP3P21580 790 aa18.8■□□□□ 0.6
SRF-201ENST00000265354 ATG3Q9NT62 314 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms