RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 CUEDC2Q9H467 287 aa6.21□□□□□ -1.42
VCAN-201ENST00000265077 KNTC1P50748 2209 aa6.21□□□□□ -1.42
VCAN-201ENST00000265077 REREQ9P2R6 1566 aa6.21□□□□□ -1.42
VCAN-201ENST00000265077 MAN1A1P33908 653 aa6.21□□□□□ -1.42
VCAN-201ENST00000265077 BBOF1Q8ND07 529 aa6.21□□□□□ -1.42
VCAN-201ENST00000265077 PLBD2Q8NHP8 589 aa6.21□□□□□ -1.42
VCAN-201ENST00000265077 SDK1Q7Z5N4 2213 aa6.21□□□□□ -1.42
VCAN-201ENST00000265077 GIPC1O14908 333 aa6.21□□□□□ -1.42
VCAN-201ENST00000265077 BAG2O95816 211 aa6.21□□□□□ -1.42
VCAN-201ENST00000265077 XRCC5P13010 732 aaKnown RBP6.21□□□□□ -1.42
VCAN-201ENST00000265077 H2AFXP16104 143 aaPredicted RBP6.21□□□□□ -1.42
VCAN-201ENST00000265077 GGCXP38435 758 aa6.21□□□□□ -1.42
VCAN-201ENST00000265077 ARL1P40616 181 aaPredicted RBP6.21□□□□□ -1.42
VCAN-201ENST00000265077 MCM8Q9UJA3 840 aa6.21□□□□□ -1.42
VCAN-201ENST00000265077 AMFRQ9UKV5 643 aa6.21□□□□□ -1.42
VCAN-201ENST00000265077 NIP7Q9Y221 180 aaKnown RBP eCLIP6.21□□□□□ -1.42
VCAN-201ENST00000265077 KCNJ18B7U540 433 aa6.21□□□□□ -1.42
VCAN-201ENST00000265077 VIL1P09327 827 aaKnown RBP6.21□□□□□ -1.42
VCAN-201ENST00000265077 KCNJ12Q14500 433 aa6.21□□□□□ -1.42
VCAN-201ENST00000265077 LETM2Q2VYF4 491 aa6.21□□□□□ -1.42
VCAN-201ENST00000265077 GJC2Q5T442 439 aaPredicted RBP6.21□□□□□ -1.42
VCAN-201ENST00000265077 TMCO5AQ8N6Q1 288 aa6.21□□□□□ -1.42
VCAN-201ENST00000265077 FTOQ9C0B1 505 aaKnown RBP eCLIP6.21□□□□□ -1.42
VCAN-201ENST00000265077 MMADHCQ9H3L0 296 aaPredicted RBP6.21□□□□□ -1.42
VCAN-201ENST00000265077 TRPC6Q9Y210 931 aa6.21□□□□□ -1.42
VCAN-201ENST00000265077 PCDH11XQ9BZA7 1347 aa6.21□□□□□ -1.42
VCAN-201ENST00000265077 PCDH11YQ9BZA8 1340 aa6.21□□□□□ -1.42
VCAN-201ENST00000265077 SKAP2O75563 359 aaPredicted RBP6.21□□□□□ -1.42
VCAN-201ENST00000265077 ATICP31939 592 aa6.21□□□□□ -1.42
VCAN-201ENST00000265077 KLHL30Q0D2K2 578 aa6.21□□□□□ -1.42
VCAN-201ENST00000265077 OLFML2BQ68BL8 750 aa6.21□□□□□ -1.42
VCAN-201ENST00000265077 NOSTRINQ8IVI9 506 aa6.21□□□□□ -1.42
VCAN-201ENST00000265077 NCOA5Q9HCD5 579 aaKnown RBP6.21□□□□□ -1.42
VCAN-201ENST00000265077 MCF2LO15068 1137 aa6.21□□□□□ -1.42
VCAN-201ENST00000265077 GSTA2P09210 222 aa6.21□□□□□ -1.42
VCAN-201ENST00000265077 CCDC93Q567U6 631 aa6.21□□□□□ -1.42
VCAN-201ENST00000265077 TMEM154Q6P9G4 183 aa6.21□□□□□ -1.42
VCAN-201ENST00000265077 C2CD5Q86YS7 1000 aa6.21□□□□□ -1.42
VCAN-201ENST00000265077 KLHL7Q8IXQ5 586 aa6.21□□□□□ -1.42
VCAN-201ENST00000265077 TNNQ9UQP3 1299 aa6.21□□□□□ -1.42
VCAN-201ENST00000265077 MROH5Q6ZUA9 1318 aa6.2□□□□□ -1.42
VCAN-201ENST00000265077 KRT5P13647 590 aa6.2□□□□□ -1.42
VCAN-201ENST00000265077 RNASE9P60153 205 aaKnown RBP6.2□□□□□ -1.42
VCAN-201ENST00000265077 KCNB1Q14721 858 aa6.2□□□□□ -1.42
VCAN-201ENST00000265077 KIFC2Q96AC6 838 aa6.2□□□□□ -1.42
VCAN-201ENST00000265077 LSM1O15116 133 aaKnown RBP6.2□□□□□ -1.42
VCAN-201ENST00000265077 PFKFB1P16118 471 aa6.2□□□□□ -1.42
VCAN-201ENST00000265077 KRT40Q6A162 431 aa6.2□□□□□ -1.42
VCAN-201ENST00000265077 CCDC105Q8IYK2 499 aa6.2□□□□□ -1.42
VCAN-201ENST00000265077 PARD3BQ8TEW8 1205 aa6.2□□□□□ -1.42
VCAN-201ENST00000265077 IL17RAQ96F46 866 aa6.2□□□□□ -1.42
VCAN-201ENST00000265077 EPSTI1Q96J88 318 aa6.2□□□□□ -1.42
VCAN-201ENST00000265077 GORASP1Q9BQQ3 440 aa6.2□□□□□ -1.42
VCAN-201ENST00000265077 TBC1D23Q9NUY8 699 aa6.2□□□□□ -1.42
VCAN-201ENST00000265077 BZW2Q9Y6E2 419 aaKnown RBP6.2□□□□□ -1.42
VCAN-201ENST00000265077 ARHGAP31Q2M1Z3 1444 aa6.2□□□□□ -1.42
VCAN-201ENST00000265077 DCAF8L1A6NGE4 600 aa6.2□□□□□ -1.42
VCAN-201ENST00000265077 KRIT1O00522 736 aa6.2□□□□□ -1.42
VCAN-201ENST00000265077 IKBKBO14920 756 aa6.2□□□□□ -1.42
VCAN-201ENST00000265077 N4BP1O75113 896 aaKnown RBP6.2□□□□□ -1.42
VCAN-201ENST00000265077 CRCPO75575 148 aa6.2□□□□□ -1.42
VCAN-201ENST00000265077 RNASELQ05823 741 aaKnown RBP6.2□□□□□ -1.42
VCAN-201ENST00000265077 PSMD6Q15008 389 aa6.2□□□□□ -1.42
VCAN-201ENST00000265077 RRAGAQ7L523 313 aa6.2□□□□□ -1.42
VCAN-201ENST00000265077 SNRNP27Q8WVK2 155 aaKnown RBP6.2□□□□□ -1.42
VCAN-201ENST00000265077 MPP4Q96JB8 637 aa6.2□□□□□ -1.42
VCAN-201ENST00000265077 OSBPL3Q9H4L5 887 aa6.2□□□□□ -1.42
VCAN-201ENST00000265077 PRDM16Q9HAZ2 1276 aa6.2□□□□□ -1.42
VCAN-201ENST00000265077 GSPT1P15170 499 aaKnown RBP6.2□□□□□ -1.42
VCAN-201ENST00000265077 EMBQ6PCB8 327 aa6.2□□□□□ -1.42
VCAN-201ENST00000265077 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.2□□□□□ -1.42
VCAN-201ENST00000265077 RTEL1Q9NZ71 1219 aa6.2□□□□□ -1.42
VCAN-201ENST00000265077 E7EWF7 191 aa6.2□□□□□ -1.42
VCAN-201ENST00000265077 CHMP2AO43633 222 aa6.2□□□□□ -1.42
VCAN-201ENST00000265077 CCDC89Q8N998 374 aa6.2□□□□□ -1.42
VCAN-201ENST00000265077 EZH1Q92800 747 aaPredicted RBP6.2□□□□□ -1.42
VCAN-201ENST00000265077 PANX2Q96RD6 677 aa6.2□□□□□ -1.42
VCAN-201ENST00000265077 ZMYM6O95789 1325 aa6.2□□□□□ -1.42
VCAN-201ENST00000265077 ATP5JP18859 108 aa6.2□□□□□ -1.42
VCAN-201ENST00000265077 SPATA1Q5VX52 437 aa6.2□□□□□ -1.42
VCAN-201ENST00000265077 NFATC2IPQ8NCF5 419 aa6.2□□□□□ -1.42
VCAN-201ENST00000265077 ATP6V1G1O75348 118 aa6.2□□□□□ -1.42
VCAN-201ENST00000265077 SERPINB3P29508 390 aa6.2□□□□□ -1.42
VCAN-201ENST00000265077 TYW1BQ6NUM6 668 aa6.2□□□□□ -1.42
VCAN-201ENST00000265077 DCUN1D2Q6PH85 259 aa6.2□□□□□ -1.42
VCAN-201ENST00000265077 PIK3AP1Q6ZUJ8 805 aa6.2□□□□□ -1.42
VCAN-201ENST00000265077 GRK7Q8WTQ7 553 aa6.2□□□□□ -1.42
VCAN-201ENST00000265077 COQ7Q99807 217 aa6.2□□□□□ -1.42
VCAN-201ENST00000265077 POLR3EQ9NVU0 708 aa6.2□□□□□ -1.42
VCAN-201ENST00000265077 SUPT3HO75486 399 aa6.2□□□□□ -1.42
VCAN-201ENST00000265077 C10orf76Q5T2E6 689 aa6.2□□□□□ -1.42
VCAN-201ENST00000265077 C6orf118Q5T5N4 469 aa6.2□□□□□ -1.42
VCAN-201ENST00000265077 CYB5D1Q6P9G0 228 aa6.2□□□□□ -1.42
VCAN-201ENST00000265077 FAM227BQ96M60 508 aa6.2□□□□□ -1.42
VCAN-201ENST00000265077 PLIN2Q99541 437 aa6.2□□□□□ -1.42
VCAN-201ENST00000265077 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.2□□□□□ -1.42
VCAN-201ENST00000265077 IQSEC3Q9UPP2 1182 aaPredicted RBP6.2□□□□□ -1.42
VCAN-201ENST00000265077 KRT4P19013 534 aa6.2□□□□□ -1.42
VCAN-201ENST00000265077 HOXC9P31274 260 aa6.2□□□□□ -1.42
VCAN-201ENST00000265077 ADKP55263 362 aaKnown RBP6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms