RNA–Protein interactions for RNA: ENST00000265038.9

ERCC8-201, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC8, Length 2,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-201ENST00000265038 TMTC3Q6ZXV5 915 aa9.77□□□□□ -0.85
ERCC8-201ENST00000265038 ANKLE1Q8NAG6 615 aa9.77□□□□□ -0.85
ERCC8-201ENST00000265038 SYTL5Q8TDW5 730 aaPredicted RBP9.77□□□□□ -0.85
ERCC8-201ENST00000265038 PAWRQ96IZ0 340 aaKnown RBP9.77□□□□□ -0.85
ERCC8-201ENST00000265038 TM6SF1Q9BZW5 370 aa9.77□□□□□ -0.85
ERCC8-201ENST00000265038 MAF1Q9H063 256 aa9.77□□□□□ -0.85
ERCC8-201ENST00000265038 COL20A1Q9P218 1284 aa9.77□□□□□ -0.85
ERCC8-201ENST00000265038 ZBTB43O43298 467 aa9.77□□□□□ -0.85
ERCC8-201ENST00000265038 CDC27P30260 824 aa9.77□□□□□ -0.85
ERCC8-201ENST00000265038 GHRHRQ02643 423 aa9.77□□□□□ -0.85
ERCC8-201ENST00000265038 FUT2Q10981 343 aa9.77□□□□□ -0.85
ERCC8-201ENST00000265038 TOB2Q14106 344 aaPredicted RBP9.77□□□□□ -0.85
ERCC8-201ENST00000265038 C8orf34Q49A92 452 aa9.77□□□□□ -0.85
ERCC8-201ENST00000265038 MCF2L2Q86YR7 1114 aa9.77□□□□□ -0.85
ERCC8-201ENST00000265038 CCDC82Q8N4S0 544 aa9.77□□□□□ -0.85
ERCC8-201ENST00000265038 RRP36Q96EU6 259 aaKnown RBP9.77□□□□□ -0.85
ERCC8-201ENST00000265038 TAAR1Q96RJ0 339 aa9.77□□□□□ -0.85
ERCC8-201ENST00000265038 ABHD16BQ9H3Z7 469 aa9.77□□□□□ -0.85
ERCC8-201ENST00000265038 ADD3Q9UEY8 706 aaKnown RBP9.77□□□□□ -0.85
ERCC8-201ENST00000265038 ZHX1Q9UKY1 873 aaPredicted RBP9.77□□□□□ -0.85
ERCC8-201ENST00000265038 FAM184BQ9ULE4 1060 aa9.77□□□□□ -0.85
ERCC8-201ENST00000265038 BRCA2P51587 3418 aa9.76□□□□□ -0.85
ERCC8-201ENST00000265038 ADCY6O43306 1168 aa9.76□□□□□ -0.85
ERCC8-201ENST00000265038 AKR1A1P14550 325 aa9.76□□□□□ -0.85
ERCC8-201ENST00000265038 EDNRBP24530 442 aa9.76□□□□□ -0.85
ERCC8-201ENST00000265038 HSD17B4P51659 736 aa9.76□□□□□ -0.85
ERCC8-201ENST00000265038 RCAN1P53805 252 aa9.76□□□□□ -0.85
ERCC8-201ENST00000265038 EVCP57679 992 aa9.76□□□□□ -0.85
ERCC8-201ENST00000265038 FGD1P98174 961 aa9.76□□□□□ -0.85
ERCC8-201ENST00000265038 RTN1Q16799 776 aa9.76□□□□□ -0.85
ERCC8-201ENST00000265038 DNERQ8NFT8 737 aa9.76□□□□□ -0.85
ERCC8-201ENST00000265038 LENG1Q96BZ8 264 aaPredicted RBP9.76□□□□□ -0.85
ERCC8-201ENST00000265038 UPF3BQ9BZI7 483 aaKnown RBP9.76□□□□□ -0.85
ERCC8-201ENST00000265038 RBM28Q9NW13 759 aaKnown RBP9.76□□□□□ -0.85
ERCC8-201ENST00000265038 CYP46A1Q9Y6A2 500 aa9.76□□□□□ -0.85
ERCC8-201ENST00000265038 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.75□□□□□ -0.85
ERCC8-201ENST00000265038 hCG_1642624A0A1W2PR95 340 aa9.75□□□□□ -0.85
ERCC8-201ENST00000265038 GOLGA8AA7E2F4 631 aa9.75□□□□□ -0.85
ERCC8-201ENST00000265038 GOLGA8BA8MQT2 603 aa9.75□□□□□ -0.85
ERCC8-201ENST00000265038 CFBP00751 764 aa9.75□□□□□ -0.85
ERCC8-201ENST00000265038 COL6A1P12109 1028 aa9.75□□□□□ -0.85
ERCC8-201ENST00000265038 CCDC144BQ3MJ40 725 aa9.75□□□□□ -0.85
ERCC8-201ENST00000265038 GJC2Q5T442 439 aaPredicted RBP9.75□□□□□ -0.85
ERCC8-201ENST00000265038 TAPT1Q6NXT6 567 aa9.75□□□□□ -0.85
ERCC8-201ENST00000265038 EEPD1Q7L9B9 569 aa9.75□□□□□ -0.85
ERCC8-201ENST00000265038 NECAB2Q7Z6G3 386 aa9.75□□□□□ -0.85
ERCC8-201ENST00000265038 IL17RAQ96F46 866 aa9.75□□□□□ -0.85
ERCC8-201ENST00000265038 PDGFCQ9NRA1 345 aa9.75□□□□□ -0.85
ERCC8-201ENST00000265038 LOC102724159A0A0B4J2E5 919 aa9.75□□□□□ -0.85
ERCC8-201ENST00000265038 PGK1P00558 417 aa9.75□□□□□ -0.85
ERCC8-201ENST00000265038 RARBP10826 455 aa9.75□□□□□ -0.85
ERCC8-201ENST00000265038 HOXA13P31271 388 aaPredicted RBP9.75□□□□□ -0.85
ERCC8-201ENST00000265038 ADD1P35611 737 aaKnown RBP9.75□□□□□ -0.85
ERCC8-201ENST00000265038 ADCYAP1R1P41586 468 aa9.75□□□□□ -0.85
ERCC8-201ENST00000265038 ANAPC15P60006 121 aa9.75□□□□□ -0.85
ERCC8-201ENST00000265038 TRAF1Q13077 416 aa9.75□□□□□ -0.85
ERCC8-201ENST00000265038 PWP2Q15269 919 aaKnown RBP9.75□□□□□ -0.85
ERCC8-201ENST00000265038 LRRC41Q15345 812 aa9.75□□□□□ -0.85
ERCC8-201ENST00000265038 TMEM63BQ5T3F8 832 aa9.75□□□□□ -0.85
ERCC8-201ENST00000265038 FBXO16Q8IX29 292 aaPredicted RBP9.75□□□□□ -0.85
ERCC8-201ENST00000265038 C11orf49Q9H6J7 331 aa9.75□□□□□ -0.85
ERCC8-201ENST00000265038 XPNPEP3Q9NQH7 507 aa9.75□□□□□ -0.85
ERCC8-201ENST00000265038 MAP3K20Q9NYL2 800 aaKnown RBP9.75□□□□□ -0.85
ERCC8-201ENST00000265038 NAP1L2Q9ULW6 460 aaPredicted RBP9.75□□□□□ -0.85
ERCC8-201ENST00000265038 KIAA0100Q14667 2235 aaKnown RBP9.75□□□□□ -0.85
ERCC8-201ENST00000265038 CNTNAP5Q8WYK1 1306 aa9.74□□□□□ -0.85
ERCC8-201ENST00000265038 GCOM1H8Y6P7 765 aaPredicted RBP9.74□□□□□ -0.85
ERCC8-201ENST00000265038 DNM1LO00429 736 aa9.74□□□□□ -0.85
ERCC8-201ENST00000265038 EIF5BO60841 1220 aaKnown RBP9.74□□□□□ -0.85
ERCC8-201ENST00000265038 ADAMTS4O75173 837 aa9.74□□□□□ -0.85
ERCC8-201ENST00000265038 POLR2MP0CAP2 368 aa9.74□□□□□ -0.85
ERCC8-201ENST00000265038 PTGS1P23219 599 aa9.74□□□□□ -0.85
ERCC8-201ENST00000265038 PDIA3P30101 505 aaKnown RBP9.74□□□□□ -0.85
ERCC8-201ENST00000265038 METAP2P50579 478 aaKnown RBP eCLIP9.74□□□□□ -0.85
ERCC8-201ENST00000265038 IRX5P78411 483 aaPredicted RBP9.74□□□□□ -0.85
ERCC8-201ENST00000265038 SAMD3Q8N6K7 520 aa9.74□□□□□ -0.85
ERCC8-201ENST00000265038 ARRDC4Q8NCT1 418 aa9.74□□□□□ -0.85
ERCC8-201ENST00000265038 LARP6Q9BRS8 491 aaKnown RBP9.74□□□□□ -0.85
ERCC8-201ENST00000265038 VTA1Q9NP79 307 aa9.74□□□□□ -0.85
ERCC8-201ENST00000265038 PDRG1Q9NUG6 133 aa9.74□□□□□ -0.85
ERCC8-201ENST00000265038 SEC63Q9UGP8 760 aaKnown RBP9.74□□□□□ -0.85
ERCC8-201ENST00000265038 GNEQ9Y223 722 aaKnown RBP9.74□□□□□ -0.85
ERCC8-201ENST00000265038 V9GY48 417 aaPredicted RBP9.74□□□□□ -0.85
ERCC8-201ENST00000265038 RBBP6Q7Z6E9 1792 aaKnown RBP9.74□□□□□ -0.85
ERCC8-201ENST00000265038 DUSP11O75319 330 aaKnown RBP9.73□□□□□ -0.85
ERCC8-201ENST00000265038 SMPD1P17405 629 aa9.73□□□□□ -0.85
ERCC8-201ENST00000265038 TNFAIP2Q03169 654 aa9.73□□□□□ -0.85
ERCC8-201ENST00000265038 PDE4DQ08499 809 aa9.73□□□□□ -0.85
ERCC8-201ENST00000265038 PPP2R5BQ15173 497 aa9.73□□□□□ -0.85
ERCC8-201ENST00000265038 NSUN6Q8TEA1 469 aaKnown RBP9.73□□□□□ -0.85
ERCC8-201ENST00000265038 RMDN3Q96TC7 470 aa9.73□□□□□ -0.85
ERCC8-201ENST00000265038 NID2Q14112 1375 aa9.73□□□□□ -0.85
ERCC8-201ENST00000265038 RBM47A0AV96 593 aaKnown RBP9.73□□□□□ -0.85
ERCC8-201ENST00000265038 MYADML2A6NDP7 307 aa9.73□□□□□ -0.85
ERCC8-201ENST00000265038 CTAGE5O15320 804 aa9.73□□□□□ -0.85
ERCC8-201ENST00000265038 MYCNP04198 464 aaPredicted RBP9.73□□□□□ -0.85
ERCC8-201ENST00000265038 EIF2AK2P19525 551 aaKnown RBP9.73□□□□□ -0.85
ERCC8-201ENST00000265038 NTRK3Q16288 839 aa9.73□□□□□ -0.85
ERCC8-201ENST00000265038 ARHGEF16Q5VV41 709 aa9.73□□□□□ -0.85
ERCC8-201ENST00000265038 IQSEC1Q6DN90 963 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms