RNA–Protein interactions for RNA: ENST00000262675.11

TTC39A-201, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39A, Length 2,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-201ENST00000262675 XPNPEP3Q9NQH7 507 aa11.03□□□□□ -0.64
TTC39A-201ENST00000262675 RTEL1Q9NZ71 1219 aa11.03□□□□□ -0.64
TTC39A-201ENST00000262675 ARPP21Q9UBL0 812 aaPredicted RBP11.03□□□□□ -0.64
TTC39A-201ENST00000262675 RANBP2P49792 3224 aaKnown RBP11.03□□□□□ -0.64
TTC39A-201ENST00000262675 M0R2C6 588 aa11.03□□□□□ -0.64
TTC39A-201ENST00000262675 KINO60870 393 aaKnown RBP11.03□□□□□ -0.64
TTC39A-201ENST00000262675 MBD4O95243 580 aa11.03□□□□□ -0.64
TTC39A-201ENST00000262675 AKR1A1P14550 325 aa11.03□□□□□ -0.64
TTC39A-201ENST00000262675 PLCB2Q00722 1185 aa11.03□□□□□ -0.64
TTC39A-201ENST00000262675 RALYLQ86SE5 291 aaKnown RBP11.03□□□□□ -0.64
TTC39A-201ENST00000262675 PLA2G4DQ86XP0 818 aa11.03□□□□□ -0.64
TTC39A-201ENST00000262675 TINF2Q9BSI4 451 aa11.03□□□□□ -0.64
TTC39A-201ENST00000262675 ARMT1Q9H993 441 aa11.03□□□□□ -0.64
TTC39A-201ENST00000262675 ZNF287Q9HBT7 754 aa11.03□□□□□ -0.64
TTC39A-201ENST00000262675 PRDM5Q9NQX1 630 aaPredicted RBP11.03□□□□□ -0.64
TTC39A-201ENST00000262675 PDLIM7Q9NR12 457 aa11.03□□□□□ -0.64
TTC39A-201ENST00000262675 ANO10Q9NW15 660 aa11.03□□□□□ -0.64
TTC39A-201ENST00000262675 SYNPO2Q9UMS6 1093 aa11.03□□□□□ -0.64
TTC39A-201ENST00000262675 BAZ2AQ9UIF9 1905 aaKnown RBP11.02□□□□□ -0.64
TTC39A-201ENST00000262675 ZMYM6O95789 1325 aa11.02□□□□□ -0.64
TTC39A-201ENST00000262675 COL11A1P12107 1806 aaPredicted RBP11.02□□□□□ -0.65
TTC39A-201ENST00000262675 GOLGA6L19H0YKK7 550 aa11.02□□□□□ -0.65
TTC39A-201ENST00000262675 ZNF213O14771 459 aa11.02□□□□□ -0.65
TTC39A-201ENST00000262675 YEATS4O95619 227 aa11.02□□□□□ -0.65
TTC39A-201ENST00000262675 AKR1B1P15121 316 aa11.02□□□□□ -0.65
TTC39A-201ENST00000262675 STAT3P40763 770 aa11.02□□□□□ -0.65
TTC39A-201ENST00000262675 ADCYAP1R1P41586 468 aa11.02□□□□□ -0.65
TTC39A-201ENST00000262675 TRDNQ13061 729 aa11.02□□□□□ -0.65
TTC39A-201ENST00000262675 TMEM132BQ14DG7 1078 aa11.02□□□□□ -0.65
TTC39A-201ENST00000262675 TRIM60Q495X7 471 aa11.02□□□□□ -0.65
TTC39A-201ENST00000262675 TPRNQ4KMQ1 711 aa11.02□□□□□ -0.65
TTC39A-201ENST00000262675 ADALQ6DHV7 355 aa11.02□□□□□ -0.65
TTC39A-201ENST00000262675 CCDC174Q6PII3 467 aa11.02□□□□□ -0.65
TTC39A-201ENST00000262675 CKAP2LQ8IYA6 745 aa11.02□□□□□ -0.65
TTC39A-201ENST00000262675 MB21D2Q8IYB1 491 aaPredicted RBP11.02□□□□□ -0.65
TTC39A-201ENST00000262675 KCNG4Q8TDN1 519 aa11.02□□□□□ -0.65
TTC39A-201ENST00000262675 NUP133Q8WUM0 1156 aa11.02□□□□□ -0.65
TTC39A-201ENST00000262675 TOX2Q96NM4 488 aa11.02□□□□□ -0.65
TTC39A-201ENST00000262675 GUCD1Q96NT3 240 aa11.02□□□□□ -0.65
TTC39A-201ENST00000262675 NAT10Q9H0A0 1025 aaKnown RBP11.02□□□□□ -0.65
TTC39A-201ENST00000262675 TTC12Q9H892 705 aaPredicted RBP11.02□□□□□ -0.65
TTC39A-201ENST00000262675 PPP1R9AQ9ULJ8 1098 aa11.02□□□□□ -0.65
TTC39A-201ENST00000262675 MROH7Q68CQ1 1323 aa11.02□□□□□ -0.65
TTC39A-201ENST00000262675 SYNGAP1Q96PV0 1343 aa11.02□□□□□ -0.65
TTC39A-201ENST00000262675 VWA5AO00534 786 aa11.01□□□□□ -0.65
TTC39A-201ENST00000262675 CDKL5O76039 1030 aa11.01□□□□□ -0.65
TTC39A-201ENST00000262675 FGAP02671 866 aa11.01□□□□□ -0.65
TTC39A-201ENST00000262675 CLTBP09497 229 aa11.01□□□□□ -0.65
TTC39A-201ENST00000262675 ZNF75DP51815 510 aa11.01□□□□□ -0.65
TTC39A-201ENST00000262675 ZNF792Q3KQV3 632 aa11.01□□□□□ -0.65
TTC39A-201ENST00000262675 SIAH1Q8IUQ4 282 aa11.01□□□□□ -0.65
TTC39A-201ENST00000262675 MRFAP1L1Q96HT8 127 aa11.01□□□□□ -0.65
TTC39A-201ENST00000262675 LRRC2Q9BYS8 371 aa11.01□□□□□ -0.65
TTC39A-201ENST00000262675 POLR3EQ9NVU0 708 aa11.01□□□□□ -0.65
TTC39A-201ENST00000262675 MOXD2PA6NHM9 499 aa11.01□□□□□ -0.65
TTC39A-201ENST00000262675 USP17L12C9JPN9 530 aa11.01□□□□□ -0.65
TTC39A-201ENST00000262675 USP17L21D6R901 530 aa11.01□□□□□ -0.65
TTC39A-201ENST00000262675 KIAA0355O15063 1070 aa11.01□□□□□ -0.65
TTC39A-201ENST00000262675 AP5Z1O43299 807 aa11.01□□□□□ -0.65
TTC39A-201ENST00000262675 CYP2D6P10635 497 aa11.01□□□□□ -0.65
TTC39A-201ENST00000262675 EEF2P13639 858 aaKnown RBP11.01□□□□□ -0.65
TTC39A-201ENST00000262675 SHHQ15465 462 aa11.01□□□□□ -0.65
TTC39A-201ENST00000262675 SBK1Q52WX2 424 aa11.01□□□□□ -0.65
TTC39A-201ENST00000262675 CPLX2Q6PUV4 134 aaKnown RBP11.01□□□□□ -0.65
TTC39A-201ENST00000262675 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.01□□□□□ -0.65
TTC39A-201ENST00000262675 ZNF467Q7Z7K2 595 aaPredicted RBP11.01□□□□□ -0.65
TTC39A-201ENST00000262675 LUZP1Q86V48 1076 aa11.01□□□□□ -0.65
TTC39A-201ENST00000262675 SPICE1Q8N0Z3 855 aa11.01□□□□□ -0.65
TTC39A-201ENST00000262675 SLC44A5Q8NCS7 719 aa11.01□□□□□ -0.65
TTC39A-201ENST00000262675 ENGASEQ8NFI3 743 aa11.01□□□□□ -0.65
TTC39A-201ENST00000262675 BADQ92934 168 aa11.01□□□□□ -0.65
TTC39A-201ENST00000262675 DYNLL2Q96FJ2 89 aa11.01□□□□□ -0.65
TTC39A-201ENST00000262675 TRIM5Q9C035 493 aa11.01□□□□□ -0.65
TTC39A-201ENST00000262675 GREB1LQ9C091 1923 aaPredicted RBP11□□□□□ -0.65
TTC39A-201ENST00000262675 DCDC2CA8MYV0 355 aa11□□□□□ -0.65
TTC39A-201ENST00000262675 ATP2A1O14983 1001 aa11□□□□□ -0.65
TTC39A-201ENST00000262675 PRC1O43663 620 aa11□□□□□ -0.65
TTC39A-201ENST00000262675 CHGBP05060 677 aa11□□□□□ -0.65
TTC39A-201ENST00000262675 FDX1P10109 184 aa11□□□□□ -0.65
TTC39A-201ENST00000262675 CCT2P78371 535 aaKnown RBP11□□□□□ -0.65
TTC39A-201ENST00000262675 FAM47AQ5JRC9 791 aa11□□□□□ -0.65
TTC39A-201ENST00000262675 KIAA1755Q5JYT7 1200 aa11□□□□□ -0.65
TTC39A-201ENST00000262675 FBXO18Q8NFZ0 1043 aa11□□□□□ -0.65
TTC39A-201ENST00000262675 MRPS27Q92552 414 aaKnown RBP11□□□□□ -0.65
TTC39A-201ENST00000262675 C8orf76Q96K31 380 aa11□□□□□ -0.65
TTC39A-201ENST00000262675 USP28Q96RU2 1077 aa11□□□□□ -0.65
TTC39A-201ENST00000262675 TEX13BQ9BXU2 312 aa11□□□□□ -0.65
TTC39A-201ENST00000262675 SEMA6BQ9H3T3 888 aa11□□□□□ -0.65
TTC39A-201ENST00000262675 NYAP2Q9P242 653 aa11□□□□□ -0.65
TTC39A-201ENST00000262675 FBXO40Q9UH90 709 aa11□□□□□ -0.65
TTC39A-201ENST00000262675 FAM184BQ9ULE4 1060 aa11□□□□□ -0.65
TTC39A-201ENST00000262675 CTDP1Q9Y5B0 961 aaPredicted RBP11□□□□□ -0.65
TTC39A-201ENST00000262675 SLC4A4Q9Y6R1 1079 aa11□□□□□ -0.65
TTC39A-201ENST00000262675 SZT2Q5T011 3432 aa11□□□□□ -0.65
TTC39A-201ENST00000262675 CPLX1O14810 134 aa11□□□□□ -0.65
TTC39A-201ENST00000262675 GPAA1O43292 621 aa11□□□□□ -0.65
TTC39A-201ENST00000262675 MYCNP04198 464 aaPredicted RBP11□□□□□ -0.65
TTC39A-201ENST00000262675 TLE2Q04725 743 aa11□□□□□ -0.65
TTC39A-201ENST00000262675 SNW1Q13573 536 aaKnown RBP11□□□□□ -0.65
TTC39A-201ENST00000262675 ALX1Q15699 326 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms