RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 PSMD1Q99460 953 aa15.3■□□□□ 0.04
VMP1-201ENST00000262291 SYNRGQ9UMZ2 1314 aa15.3■□□□□ 0.04
VMP1-201ENST00000262291 ERICH4A6NGS2 130 aa15.3■□□□□ 0.04
VMP1-201ENST00000262291 GTPBP6O43824 516 aaPredicted RBP15.3■□□□□ 0.04
VMP1-201ENST00000262291 ENTPD3O75355 529 aa15.3■□□□□ 0.04
VMP1-201ENST00000262291 RPN1P04843 607 aaKnown RBP15.3■□□□□ 0.04
VMP1-201ENST00000262291 RIC8AQ9NPQ8 531 aa15.3■□□□□ 0.04
VMP1-201ENST00000262291 PIM2Q9P1W9 311 aa15.3■□□□□ 0.04
VMP1-201ENST00000262291 HDAC9Q9UKV0 1011 aa15.3■□□□□ 0.04
VMP1-201ENST00000262291 ZNRF3Q9ULT6 936 aa15.3■□□□□ 0.04
VMP1-201ENST00000262291 ESYT2A0FGR8 921 aa15.3■□□□□ 0.04
VMP1-201ENST00000262291 TRIML1Q8N9V2 468 aa15.3■□□□□ 0.04
VMP1-201ENST00000262291 ENOX1Q8TC92 643 aaKnown RBP15.3■□□□□ 0.04
VMP1-201ENST00000262291 CUL5Q93034 780 aa15.3■□□□□ 0.04
VMP1-201ENST00000262291 HPS3Q969F9 1004 aa15.3■□□□□ 0.04
VMP1-201ENST00000262291 TRERF1Q96PN7 1200 aa15.3■□□□□ 0.04
VMP1-201ENST00000262291 GSDMAQ96QA5 445 aa15.3■□□□□ 0.04
VMP1-201ENST00000262291 NUDT12Q9BQG2 462 aa15.3■□□□□ 0.04
VMP1-201ENST00000262291 DACH1Q9UI36 760 aa15.3■□□□□ 0.04
VMP1-201ENST00000262291 CNTNAP1P78357 1384 aa15.29■□□□□ 0.04
VMP1-201ENST00000262291 MKL1Q969V6 931 aa15.29■□□□□ 0.04
VMP1-201ENST00000262291 P2RX7Q99572 595 aaKnown RBP15.29■□□□□ 0.04
VMP1-201ENST00000262291 MMTAG2Q9BU76 263 aaKnown RBP15.29■□□□□ 0.04
VMP1-201ENST00000262291 GLIS2Q9BZE0 524 aaPredicted RBP15.29■□□□□ 0.04
VMP1-201ENST00000262291 GREB1LQ9C091 1923 aaPredicted RBP15.29■□□□□ 0.04
VMP1-201ENST00000262291 R3HDM1Q15032 1099 aaKnown RBP15.29■□□□□ 0.04
VMP1-201ENST00000262291 BCS1LQ9Y276 419 aa15.29■□□□□ 0.04
VMP1-201ENST00000262291 SMCHD1A6NHR9 2005 aa15.28■□□□□ 0.04
VMP1-201ENST00000262291 TRIM49BA6NDI0 452 aa15.28■□□□□ 0.04
VMP1-201ENST00000262291 TEX33O43247 280 aa15.28■□□□□ 0.04
VMP1-201ENST00000262291 ZNF18P17022 549 aa15.28■□□□□ 0.04
VMP1-201ENST00000262291 HOXA13P31271 388 aaPredicted RBP15.28■□□□□ 0.04
VMP1-201ENST00000262291 NCBP1Q09161 790 aaKnown RBP15.28■□□□□ 0.04
VMP1-201ENST00000262291 TPD52L1Q16890 204 aaPredicted RBP15.28■□□□□ 0.04
VMP1-201ENST00000262291 DCAF4Q8WV16 495 aa15.28■□□□□ 0.04
VMP1-201ENST00000262291 OGFRQ9NZT2 677 aa15.28■□□□□ 0.04
VMP1-201ENST00000262291 ASTN2O75129 1339 aaPredicted RBP15.28■□□□□ 0.04
VMP1-201ENST00000262291 MARCH6O60337 910 aa15.28■□□□□ 0.04
VMP1-201ENST00000262291 KMT5BQ4FZB7 885 aa15.28■□□□□ 0.04
VMP1-201ENST00000262291 MTMR8Q96EF0 704 aa15.28■□□□□ 0.04
VMP1-201ENST00000262291 PSDA5PKW4 1024 aaPredicted RBP15.27■□□□□ 0.04
VMP1-201ENST00000262291 BMP3P12645 472 aa15.27■□□□□ 0.04
VMP1-201ENST00000262291 SFPQP23246 707 aaKnown RBP eCLIP15.27■□□□□ 0.04
VMP1-201ENST00000262291 CCT6AP40227 531 aaKnown RBP15.27■□□□□ 0.04
VMP1-201ENST00000262291 PRCPP42785 496 aa15.27■□□□□ 0.04
VMP1-201ENST00000262291 MRPL12P52815 198 aaKnown RBP15.27■□□□□ 0.04
VMP1-201ENST00000262291 RASSF7Q02833 373 aa15.27■□□□□ 0.04
VMP1-201ENST00000262291 SPDYE2Q495Y8 402 aa15.27■□□□□ 0.04
VMP1-201ENST00000262291 DALRD3Q5D0E6 543 aaKnown RBP15.27■□□□□ 0.04
VMP1-201ENST00000262291 FAM83BQ5T0W9 1011 aa15.27■□□□□ 0.04
VMP1-201ENST00000262291 ATRNL1Q5VV63 1379 aa15.27■□□□□ 0.04
VMP1-201ENST00000262291 ZFP91Q96JP5 570 aaPredicted RBP15.27■□□□□ 0.04
VMP1-201ENST00000262291 PRPHP41219 470 aa15.27■□□□□ 0.03
VMP1-201ENST00000262291 CCDC174Q6PII3 467 aa15.27■□□□□ 0.03
VMP1-201ENST00000262291 NELFBQ8WX92 580 aa15.27■□□□□ 0.03
VMP1-201ENST00000262291 ZNF592Q92610 1267 aa15.27■□□□□ 0.03
VMP1-201ENST00000262291 MTMR9Q96QG7 549 aa15.27■□□□□ 0.03
VMP1-201ENST00000262291 CCSER1Q9C0I3 900 aa15.27■□□□□ 0.03
VMP1-201ENST00000262291 LRWD1Q9UFC0 647 aa15.27■□□□□ 0.03
VMP1-201ENST00000262291 DDX25Q9UHL0 483 aaKnown RBP15.27■□□□□ 0.03
VMP1-201ENST00000262291 WNT10BO00744 389 aa15.26■□□□□ 0.03
VMP1-201ENST00000262291 CLK2P49760 499 aaKnown RBP15.26■□□□□ 0.03
VMP1-201ENST00000262291 PMS1P54277 932 aaKnown RBP15.26■□□□□ 0.03
VMP1-201ENST00000262291 DGKZQ13574 1117 aa15.26■□□□□ 0.03
VMP1-201ENST00000262291 SYDE2Q5VT97 1194 aa15.26■□□□□ 0.03
VMP1-201ENST00000262291 SPATA1Q5VX52 437 aa15.26■□□□□ 0.03
VMP1-201ENST00000262291 VSTM4Q8IW00 320 aa15.26■□□□□ 0.03
VMP1-201ENST00000262291 FAM151AQ8WW52 585 aa15.26■□□□□ 0.03
VMP1-201ENST00000262291 hCG_1984214I3L0E3 225 aa15.26■□□□□ 0.03
VMP1-201ENST00000262291 LAD1O00515 517 aa15.26■□□□□ 0.03
VMP1-201ENST00000262291 CBFA2T2O43439 604 aa15.26■□□□□ 0.03
VMP1-201ENST00000262291 NPM3O75607 178 aaKnown RBP15.26■□□□□ 0.03
VMP1-201ENST00000262291 ERCC5P28715 1186 aaPredicted RBP15.26■□□□□ 0.03
VMP1-201ENST00000262291 ADKP55263 362 aaKnown RBP15.26■□□□□ 0.03
VMP1-201ENST00000262291 MCM6Q14566 821 aa15.26■□□□□ 0.03
VMP1-201ENST00000262291 SLC30A10Q6XR72 485 aa15.26■□□□□ 0.03
VMP1-201ENST00000262291 ZNF713Q8N859 430 aaPredicted RBP15.26■□□□□ 0.03
VMP1-201ENST00000262291 CPLX3Q8WVH0 158 aa15.26■□□□□ 0.03
VMP1-201ENST00000262291 TAOK3Q9H2K8 898 aa15.26■□□□□ 0.03
VMP1-201ENST00000262291 GJA3Q9Y6H8 435 aa15.26■□□□□ 0.03
VMP1-201ENST00000262291 MYH7BA7E2Y1 1941 aa15.26■□□□□ 0.03
VMP1-201ENST00000262291 KLRC4O43908 158 aa15.25■□□□□ 0.03
VMP1-201ENST00000262291 ASIC1P78348 528 aa15.25■□□□□ 0.03
VMP1-201ENST00000262291 DYMQ7RTS9 669 aa15.25■□□□□ 0.03
VMP1-201ENST00000262291 KCNK18Q7Z418 384 aa15.25■□□□□ 0.03
VMP1-201ENST00000262291 SLC16A10Q8TF71 515 aa15.25■□□□□ 0.03
VMP1-201ENST00000262291 HAS1Q92839 578 aa15.25■□□□□ 0.03
VMP1-201ENST00000262291 FEZ1Q99689 392 aa15.25■□□□□ 0.03
VMP1-201ENST00000262291 ZBTB21Q9ULJ3 1066 aa15.25■□□□□ 0.03
VMP1-201ENST00000262291 NFKBIEO00221 500 aa15.25■□□□□ 0.03
VMP1-201ENST00000262291 FCER1AP12319 257 aa15.25■□□□□ 0.03
VMP1-201ENST00000262291 STAT3P40763 770 aa15.25■□□□□ 0.03
VMP1-201ENST00000262291 GSDMDP57764 484 aa15.25■□□□□ 0.03
VMP1-201ENST00000262291 GRB10Q13322 594 aa15.25■□□□□ 0.03
VMP1-201ENST00000262291 ECM1Q16610 540 aa15.25■□□□□ 0.03
VMP1-201ENST00000262291 CIAPIN1Q6FI81 312 aa15.25■□□□□ 0.03
VMP1-201ENST00000262291 SAMD7Q7Z3H4 446 aa15.25■□□□□ 0.03
VMP1-201ENST00000262291 FCHSD1Q86WN1 690 aa15.25■□□□□ 0.03
VMP1-201ENST00000262291 FBXO11Q86XK2 927 aa15.25■□□□□ 0.03
VMP1-201ENST00000262291 JDP2Q8WYK2 163 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms