RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 BRMS1Q9HCU9 246 aa31.47■■■□□ 2.63
SMARCD3-201ENST00000262188 RABGAP1Q9Y3P9 1069 aa31.47■■■□□ 2.63
SMARCD3-201ENST00000262188 ERVK-9P63128 1117 aa31.46■■■□□ 2.63
SMARCD3-201ENST00000262188 ERVK-24P63145 666 aa31.46■■■□□ 2.63
SMARCD3-201ENST00000262188 PIK3AP1Q6ZUJ8 805 aa31.46■■■□□ 2.63
SMARCD3-201ENST00000262188 NCAPG2Q86XI2 1143 aa31.46■■■□□ 2.63
SMARCD3-201ENST00000262188 NOSTRINQ8IVI9 506 aa31.46■■■□□ 2.63
SMARCD3-201ENST00000262188 REXO1Q8N1G1 1221 aaKnown RBP31.46■■■□□ 2.63
SMARCD3-201ENST00000262188 FOXP1Q9H334 677 aaPredicted RBP31.46■■■□□ 2.63
SMARCD3-201ENST00000262188 FTOQ9C0B1 505 aaKnown RBP eCLIP31.45■■■□□ 2.63
SMARCD3-201ENST00000262188 NSMFQ6X4W1 530 aa31.45■■■□□ 2.62
SMARCD3-201ENST00000262188 PURBQ96QR8 312 aaKnown RBP31.45■■■□□ 2.62
SMARCD3-201ENST00000262188 PORCNQ9H237 461 aa31.45■■■□□ 2.62
SMARCD3-201ENST00000262188 XRCC6P12956 609 aaKnown RBP eCLIP31.44■■■□□ 2.62
SMARCD3-201ENST00000262188 MRPL12P52815 198 aaKnown RBP31.44■■■□□ 2.62
SMARCD3-201ENST00000262188 RIOX2Q8IUF8 465 aa31.44■■■□□ 2.62
SMARCD3-201ENST00000262188 ERCC3P19447 782 aa31.43■■■□□ 2.62
SMARCD3-201ENST00000262188 CLK2P49760 499 aaKnown RBP31.43■■■□□ 2.62
SMARCD3-201ENST00000262188 CRHR2Q13324 411 aa31.43■■■□□ 2.62
SMARCD3-201ENST00000262188 FCHSD1Q86WN1 690 aa31.43■■■□□ 2.62
SMARCD3-201ENST00000262188 CEP350Q5VT06 3117 aa31.43■■■□□ 2.62
SMARCD3-201ENST00000262188 ADGRA2Q96PE1 1338 aa31.43■■■□□ 2.62
SMARCD3-201ENST00000262188 WNT7AO00755 349 aa31.43■■■□□ 2.62
SMARCD3-201ENST00000262188 ATP2B1P20020 1258 aa31.43■■■□□ 2.62
SMARCD3-201ENST00000262188 DNM1Q05193 864 aaKnown RBP31.43■■■□□ 2.62
SMARCD3-201ENST00000262188 GALNT17Q6IS24 598 aa31.43■■■□□ 2.62
SMARCD3-201ENST00000262188 SLC30A10Q6XR72 485 aa31.43■■■□□ 2.62
SMARCD3-201ENST00000262188 EFCC1Q9HA90 598 aa31.43■■■□□ 2.62
SMARCD3-201ENST00000262188 COL20A1Q9P218 1284 aa31.43■■■□□ 2.62
SMARCD3-201ENST00000262188 C1QTNF8P60827 252 aa31.42■■■□□ 2.62
SMARCD3-201ENST00000262188 TRAF1Q13077 416 aa31.42■■■□□ 2.62
SMARCD3-201ENST00000262188 ZSCAN16Q9H4T2 348 aaPredicted RBP31.42■■■□□ 2.62
SMARCD3-201ENST00000262188 WDR78Q5VTH9 848 aa31.41■■■□□ 2.62
SMARCD3-201ENST00000262188 MTERF4Q7Z6M4 381 aaKnown RBP31.41■■■□□ 2.62
SMARCD3-201ENST00000262188 RGS22Q8NE09 1264 aa31.41■■■□□ 2.62
SMARCD3-201ENST00000262188 GPRC5AQ8NFJ5 357 aa31.41■■■□□ 2.62
SMARCD3-201ENST00000262188 TFIP11Q9UBB9 837 aaKnown RBP31.41■■■□□ 2.62
SMARCD3-201ENST00000262188 ESPNB1AK53 854 aa31.41■■■□□ 2.62
SMARCD3-201ENST00000262188 GCLCP48506 637 aaPredicted RBP31.41■■■□□ 2.62
SMARCD3-201ENST00000262188 MRE11P49959 708 aa31.41■■■□□ 2.62
SMARCD3-201ENST00000262188 BICD2Q8TD16 824 aa31.41■■■□□ 2.62
SMARCD3-201ENST00000262188 GCOM1H8Y6P7 765 aaPredicted RBP31.4■■■□□ 2.62
SMARCD3-201ENST00000262188 POLR2MP0CAP2 368 aa31.4■■■□□ 2.62
SMARCD3-201ENST00000262188 CEBPZQ03701 1054 aaKnown RBP31.4■■■□□ 2.62
SMARCD3-201ENST00000262188 INF2Q27J81 1249 aa31.4■■■□□ 2.62
SMARCD3-201ENST00000262188 MYSM1Q5VVJ2 828 aa31.4■■■□□ 2.62
SMARCD3-201ENST00000262188 FAM177A1Q8N128 213 aaPredicted RBP31.4■■■□□ 2.62
SMARCD3-201ENST00000262188 ACAD9Q9H845 621 aa31.4■■■□□ 2.62
SMARCD3-201ENST00000262188 CCDC194A0A1B0GVG4 234 aa31.39■■■□□ 2.62
SMARCD3-201ENST00000262188 TOB1P50616 345 aaPredicted RBP31.39■■■□□ 2.62
SMARCD3-201ENST00000262188 RPS6P62753 249 aaKnown RBP31.39■■■□□ 2.62
SMARCD3-201ENST00000262188 BAATQ14032 418 aaPredicted RBP31.39■■■□□ 2.62
SMARCD3-201ENST00000262188 ZCCHC17Q9NP64 241 aaKnown RBP31.39■■■□□ 2.62
SMARCD3-201ENST00000262188 A1CFQ9NQ94 594 aaKnown RBP31.39■■■□□ 2.62
SMARCD3-201ENST00000262188 UBXN2AP68543 259 aa31.39■■■□□ 2.62
SMARCD3-201ENST00000262188 BRAPQ7Z569 592 aa31.39■■■□□ 2.62
SMARCD3-201ENST00000262188 MORF4L1Q9UBU8 362 aa31.39■■■□□ 2.62
SMARCD3-201ENST00000262188 HSPA6P17066 643 aa31.38■■■□□ 2.61
SMARCD3-201ENST00000262188 HSD17B4P51659 736 aa31.37■■■□□ 2.61
SMARCD3-201ENST00000262188 RNF207Q6ZRF8 634 aa31.37■■■□□ 2.61
SMARCD3-201ENST00000262188 GTF3C2Q8WUA4 911 aaPredicted RBP31.37■■■□□ 2.61
SMARCD3-201ENST00000262188 GDPD2Q9HCC8 539 aa31.37■■■□□ 2.61
SMARCD3-201ENST00000262188 ZFYVE28Q9HCC9 887 aa31.37■■■□□ 2.61
SMARCD3-201ENST00000262188 DDX49Q9Y6V7 483 aaKnown RBP31.37■■■□□ 2.61
SMARCD3-201ENST00000262188 TLR2O60603 784 aa31.37■■■□□ 2.61
SMARCD3-201ENST00000262188 BCRP11274 1271 aa31.37■■■□□ 2.61
SMARCD3-201ENST00000262188 TKFCQ3LXA3 575 aa31.37■■■□□ 2.61
SMARCD3-201ENST00000262188 SYTL5Q8TDW5 730 aaPredicted RBP31.37■■■□□ 2.61
SMARCD3-201ENST00000262188 TBCKQ8TEA7 893 aa31.37■■■□□ 2.61
SMARCD3-201ENST00000262188 ANO3Q9BYT9 981 aa31.37■■■□□ 2.61
SMARCD3-201ENST00000262188 PNMA2Q9UL42 364 aa31.37■■■□□ 2.61
SMARCD3-201ENST00000262188 CNPY2Q9Y2B0 182 aa31.37■■■□□ 2.61
SMARCD3-201ENST00000262188 PIK3CDO00329 1044 aa31.36■■■□□ 2.61
SMARCD3-201ENST00000262188 MCF2L2Q86YR7 1114 aa31.36■■■□□ 2.61
SMARCD3-201ENST00000262188 CHST13Q8NET6 341 aa31.36■■■□□ 2.61
SMARCD3-201ENST00000262188 TCHHQ07283 1943 aa31.36■■■□□ 2.61
SMARCD3-201ENST00000262188 RBBP6Q7Z6E9 1792 aaKnown RBP31.36■■■□□ 2.61
SMARCD3-201ENST00000262188 EDIL3O43854 480 aa31.36■■■□□ 2.61
SMARCD3-201ENST00000262188 FAM110CQ1W6H9 321 aa31.36■■■□□ 2.61
SMARCD3-201ENST00000262188 KRT25Q7Z3Z0 450 aa31.36■■■□□ 2.61
SMARCD3-201ENST00000262188 ZFP91Q96JP5 570 aaPredicted RBP31.36■■■□□ 2.61
SMARCD3-201ENST00000262188 USP28Q96RU2 1077 aa31.36■■■□□ 2.61
SMARCD3-201ENST00000262188 CYP39A1Q9NYL5 469 aa31.36■■■□□ 2.61
SMARCD3-201ENST00000262188 MYH15Q9Y2K3 1946 aa31.35■■■□□ 2.61
SMARCD3-201ENST00000262188 CA12O43570 354 aa31.35■■■□□ 2.61
SMARCD3-201ENST00000262188 TBC1D8O95759 1140 aa31.35■■■□□ 2.61
SMARCD3-201ENST00000262188 NONOQ15233 471 aaKnown RBP eCLIP31.35■■■□□ 2.61
SMARCD3-201ENST00000262188 C17orf99Q6UX52 265 aa31.35■■■□□ 2.61
SMARCD3-201ENST00000262188 ANKRD35Q8N283 1001 aa31.35■■■□□ 2.61
SMARCD3-201ENST00000262188 CLIC4Q9Y696 253 aa31.35■■■□□ 2.61
SMARCD3-201ENST00000262188 SLC25A27O95847 323 aa31.34■■■□□ 2.61
SMARCD3-201ENST00000262188 TAAR1Q96RJ0 339 aa31.34■■■□□ 2.61
SMARCD3-201ENST00000262188 GLT8D2Q9H1C3 349 aa31.34■■■□□ 2.61
SMARCD3-201ENST00000262188 PCDHB6Q9Y5E3 794 aa31.34■■■□□ 2.61
SMARCD3-201ENST00000262188 SPDYE3A6NKU9 549 aa31.34■■■□□ 2.61
SMARCD3-201ENST00000262188 BAG4O95429 457 aaKnown RBP31.34■■■□□ 2.61
SMARCD3-201ENST00000262188 TRPA1O75762 1119 aa31.33■■■□□ 2.61
SMARCD3-201ENST00000262188 PGK2P07205 417 aa31.33■■■□□ 2.61
SMARCD3-201ENST00000262188 MAP2K2P36507 400 aa31.33■■■□□ 2.61
SMARCD3-201ENST00000262188 CNTN2Q02246 1040 aa31.33■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms