RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 APPBP2Q92624 585 aa15.59■□□□□ 0.09
SGCA-201ENST00000262018 SLC9A7Q96T83 725 aa15.59■□□□□ 0.09
SGCA-201ENST00000262018 RIOK1Q9BRS2 568 aaKnown RBP15.59■□□□□ 0.09
SGCA-201ENST00000262018 TEX13BQ9BXU2 312 aa15.59■□□□□ 0.09
SGCA-201ENST00000262018 TM6SF1Q9BZW5 370 aa15.59■□□□□ 0.09
SGCA-201ENST00000262018 UBE2ZQ9H832 354 aaPredicted RBP15.59■□□□□ 0.09
SGCA-201ENST00000262018 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.58■□□□□ 0.08
SGCA-201ENST00000262018 SLC27A2O14975 620 aa15.58■□□□□ 0.08
SGCA-201ENST00000262018 ACTN1P12814 892 aa15.58■□□□□ 0.08
SGCA-201ENST00000262018 PSMC6P62333 389 aa15.58■□□□□ 0.08
SGCA-201ENST00000262018 NKX3-2P78367 333 aa15.58■□□□□ 0.08
SGCA-201ENST00000262018 TNFAIP2Q03169 654 aa15.58■□□□□ 0.08
SGCA-201ENST00000262018 TSGA10IPQ3SY00 556 aa15.58■□□□□ 0.08
SGCA-201ENST00000262018 SLFNL1Q499Z3 407 aa15.58■□□□□ 0.08
SGCA-201ENST00000262018 OSBP2Q969R2 916 aa15.58■□□□□ 0.08
SGCA-201ENST00000262018 DYNLL2Q96FJ2 89 aa15.58■□□□□ 0.08
SGCA-201ENST00000262018 DSCC1Q9BVC3 393 aa15.58■□□□□ 0.08
SGCA-201ENST00000262018 CRNKL1Q9BZJ0 848 aaKnown RBP15.58■□□□□ 0.08
SGCA-201ENST00000262018 RIPK3Q9Y572 518 aa15.58■□□□□ 0.08
SGCA-201ENST00000262018 U3KPZ7 1027 aaPredicted RBP15.58■□□□□ 0.08
SGCA-201ENST00000262018 ASTN1O14525 1302 aa15.58■□□□□ 0.08
SGCA-201ENST00000262018 MAGEB6P1A0A0J9YX57 407 aa15.57■□□□□ 0.08
SGCA-201ENST00000262018 M0R2C6 588 aa15.57■□□□□ 0.08
SGCA-201ENST00000262018 IL9P15248 144 aa15.57■□□□□ 0.08
SGCA-201ENST00000262018 RNF20Q5VTR2 975 aa15.57■□□□□ 0.08
SGCA-201ENST00000262018 HERC6Q8IVU3 1022 aa15.57■□□□□ 0.08
SGCA-201ENST00000262018 PHOSPHO2Q8TCD6 241 aa15.57■□□□□ 0.08
SGCA-201ENST00000262018 SEZ6LQ9BYH1 1024 aa15.57■□□□□ 0.08
SGCA-201ENST00000262018 SWAP70Q9UH65 585 aa15.57■□□□□ 0.08
SGCA-201ENST00000262018 NAV1Q8NEY1 1877 aa15.56■□□□□ 0.08
SGCA-201ENST00000262018 CYP2C9P11712 490 aa15.56■□□□□ 0.08
SGCA-201ENST00000262018 EEF2P13639 858 aaKnown RBP15.56■□□□□ 0.08
SGCA-201ENST00000262018 KCNA5P22460 613 aa15.56■□□□□ 0.08
SGCA-201ENST00000262018 FSCN1Q16658 493 aaKnown RBP15.56■□□□□ 0.08
SGCA-201ENST00000262018 LEXMQ3ZCV2 418 aa15.56■□□□□ 0.08
SGCA-201ENST00000262018 TLK2Q86UE8 772 aa15.56■□□□□ 0.08
SGCA-201ENST00000262018 CCDC144CPQ8IYA2 1237 aa15.56■□□□□ 0.08
SGCA-201ENST00000262018 CPXCR1Q8N123 301 aa15.56■□□□□ 0.08
SGCA-201ENST00000262018 ANKRD35Q8N283 1001 aa15.56■□□□□ 0.08
SGCA-201ENST00000262018 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.56■□□□□ 0.08
SGCA-201ENST00000262018 GDPD5Q8WTR4 605 aa15.56■□□□□ 0.08
SGCA-201ENST00000262018 FGD4Q96M96 766 aa15.56■□□□□ 0.08
SGCA-201ENST00000262018 AP5M1Q9H0R1 490 aa15.56■□□□□ 0.08
SGCA-201ENST00000262018 SLKQ9H2G2 1235 aaPredicted RBP15.56■□□□□ 0.08
SGCA-201ENST00000262018 GOPCQ9HD26 462 aa15.56■□□□□ 0.08
SGCA-201ENST00000262018 MCM3APO60318 1980 aa15.56■□□□□ 0.08
SGCA-201ENST00000262018 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.55■□□□□ 0.08
SGCA-201ENST00000262018 DYNC1LI2O43237 492 aaPredicted RBP15.55■□□□□ 0.08
SGCA-201ENST00000262018 DCXO43602 365 aa15.55■□□□□ 0.08
SGCA-201ENST00000262018 ZEB2O60315 1214 aa15.55■□□□□ 0.08
SGCA-201ENST00000262018 PTGS1P23219 599 aa15.55■□□□□ 0.08
SGCA-201ENST00000262018 DDIT3P35638 169 aa15.55■□□□□ 0.08
SGCA-201ENST00000262018 PTCRAQ6ISU1 281 aaPredicted RBP15.55■□□□□ 0.08
SGCA-201ENST00000262018 SDR42E1Q8WUS8 393 aa15.55■□□□□ 0.08
SGCA-201ENST00000262018 PHOX2BQ99453 314 aa15.55■□□□□ 0.08
SGCA-201ENST00000262018 SLF1Q9BQI6 1058 aa15.55■□□□□ 0.08
SGCA-201ENST00000262018 KATNBL1Q9H079 304 aa15.55■□□□□ 0.08
SGCA-201ENST00000262018 ALDH8A1Q9H2A2 487 aaPredicted RBP15.55■□□□□ 0.08
SGCA-201ENST00000262018 LMCD1Q9NZU5 365 aa15.55■□□□□ 0.08
SGCA-201ENST00000262018 ZNF536O15090 1300 aa15.55■□□□□ 0.08
SGCA-201ENST00000262018 MBD4O95243 580 aa15.54■□□□□ 0.08
SGCA-201ENST00000262018 SPRYD3Q8NCJ5 442 aa15.54■□□□□ 0.08
SGCA-201ENST00000262018 ANKS1AQ92625 1134 aa15.54■□□□□ 0.08
SGCA-201ENST00000262018 CCDC17Q96LX7 622 aa15.54■□□□□ 0.08
SGCA-201ENST00000262018 TTC14Q96N46 770 aa15.54■□□□□ 0.08
SGCA-201ENST00000262018 NUP88Q99567 741 aaPredicted RBP15.54■□□□□ 0.08
SGCA-201ENST00000262018 UPF3BQ9BZI7 483 aaKnown RBP15.54■□□□□ 0.08
SGCA-201ENST00000262018 FTOQ9C0B1 505 aaKnown RBP eCLIP15.54■□□□□ 0.08
SGCA-201ENST00000262018 PUS7LQ9H0K6 701 aaKnown RBP15.54■□□□□ 0.08
SGCA-201ENST00000262018 ZSWIM6Q9HCJ5 1215 aa15.54■□□□□ 0.08
SGCA-201ENST00000262018 TRMT13Q9NUP7 481 aaKnown RBP15.54■□□□□ 0.08
SGCA-201ENST00000262018 CTDP1Q9Y5B0 961 aaPredicted RBP15.54■□□□□ 0.08
SGCA-201ENST00000262018 COL4A4P53420 1690 aaPredicted RBP15.54■□□□□ 0.08
SGCA-201ENST00000262018 SUPT20HL2P0C7V6 817 aa15.53■□□□□ 0.08
SGCA-201ENST00000262018 HSPD1P10809 573 aaKnown RBP15.53■□□□□ 0.08
SGCA-201ENST00000262018 PSMA5P28066 241 aa15.53■□□□□ 0.08
SGCA-201ENST00000262018 ADCK5Q3MIX3 580 aa15.53■□□□□ 0.08
SGCA-201ENST00000262018 VPS53Q5VIR6 699 aa15.53■□□□□ 0.08
SGCA-201ENST00000262018 LCORLQ8N3X6 602 aa15.53■□□□□ 0.08
SGCA-201ENST00000262018 JAKMIP1Q96N16 626 aaKnown RBP15.53■□□□□ 0.08
SGCA-201ENST00000262018 DCP1AQ9NPI6 582 aaPredicted RBP15.53■□□□□ 0.08
SGCA-201ENST00000262018 GNEQ9Y223 722 aaKnown RBP15.53■□□□□ 0.08
SGCA-201ENST00000262018 CASTP20810 708 aaKnown RBP15.52■□□□□ 0.08
SGCA-201ENST00000262018 KRT32Q14532 448 aa15.52■□□□□ 0.08
SGCA-201ENST00000262018 ARMT1Q9H993 441 aa15.52■□□□□ 0.08
SGCA-201ENST00000262018 KANSL2Q9H9L4 492 aa15.52■□□□□ 0.08
SGCA-201ENST00000262018 RAVER2Q9HCJ3 691 aaKnown RBP15.52■□□□□ 0.08
SGCA-201ENST00000262018 CHMP5Q9NZZ3 219 aa15.52■□□□□ 0.08
SGCA-201ENST00000262018 MTUS1Q9ULD2 1270 aa15.52■□□□□ 0.08
SGCA-201ENST00000262018 TNKSO95271 1327 aa15.52■□□□□ 0.08
SGCA-201ENST00000262018 SCN5AQ14524 2016 aa15.52■□□□□ 0.08
SGCA-201ENST00000262018 POTEB3A0JP26 581 aa15.51■□□□□ 0.07
SGCA-201ENST00000262018 LCHNA4D1U4 455 aa15.51■□□□□ 0.07
SGCA-201ENST00000262018 GPAA1O43292 621 aa15.51■□□□□ 0.07
SGCA-201ENST00000262018 ZBED4O75132 1171 aa15.51■□□□□ 0.07
SGCA-201ENST00000262018 RFC2P35250 354 aa15.51■□□□□ 0.07
SGCA-201ENST00000262018 CDK8P49336 464 aa15.51■□□□□ 0.07
SGCA-201ENST00000262018 CNTN2Q02246 1040 aa15.51■□□□□ 0.07
SGCA-201ENST00000262018 POTEBQ6S5H4 581 aa15.51■□□□□ 0.07
SGCA-201ENST00000262018 HFE2Q6ZVN8 426 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms