RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 POLR2FP61218 127 aaKnown RBP17.57■□□□□ 0.4
PRPF40B-201ENST00000261897 HAUS3Q68CZ6 603 aa17.57■□□□□ 0.4
PRPF40B-201ENST00000261897 WDR59Q6PJI9 974 aa17.57■□□□□ 0.4
PRPF40B-201ENST00000261897 PPP1R12CQ9BZL4 782 aa17.57■□□□□ 0.4
PRPF40B-201ENST00000261897 SAMD15Q9P1V8 674 aa17.57■□□□□ 0.4
PRPF40B-201ENST00000261897 TPX2Q9ULW0 747 aaKnown RBP17.57■□□□□ 0.4
PRPF40B-201ENST00000261897 CPP00450 1065 aa17.57■□□□□ 0.4
PRPF40B-201ENST00000261897 APTXQ7Z2E3 356 aaKnown RBP17.57■□□□□ 0.4
PRPF40B-201ENST00000261897 FNBP4Q8N3X1 1017 aaPredicted RBP17.57■□□□□ 0.4
PRPF40B-201ENST00000261897 STAMBPL1Q96FJ0 436 aa17.57■□□□□ 0.4
PRPF40B-201ENST00000261897 STRBPQ96SI9 672 aaKnown RBP17.57■□□□□ 0.4
PRPF40B-201ENST00000261897 CPVLQ9H3G5 476 aa17.57■□□□□ 0.4
PRPF40B-201ENST00000261897 KCNK9Q9NPC2 374 aa17.57■□□□□ 0.4
PRPF40B-201ENST00000261897 GRIN2DO15399 1336 aa17.56■□□□□ 0.4
PRPF40B-201ENST00000261897 PAPD7Q5XG87 772 aaKnown RBP17.56■□□□□ 0.4
PRPF40B-201ENST00000261897 FAM114A1Q8IWE2 563 aa17.56■□□□□ 0.4
PRPF40B-201ENST00000261897 KIF2BQ8N4N8 673 aa17.56■□□□□ 0.4
PRPF40B-201ENST00000261897 ANKRD42Q8N9B4 389 aa17.56■□□□□ 0.4
PRPF40B-201ENST00000261897 AENQ8WTP8 325 aaKnown RBP17.56■□□□□ 0.4
PRPF40B-201ENST00000261897 CEMIPQ8WUJ3 1361 aa17.56■□□□□ 0.4
PRPF40B-201ENST00000261897 MYO5BQ9ULV0 1848 aa17.56■□□□□ 0.4
PRPF40B-201ENST00000261897 FRMPD1Q5SYB0 1578 aa17.56■□□□□ 0.4
PRPF40B-201ENST00000261897 DLC1Q96QB1 1528 aa17.56■□□□□ 0.4
PRPF40B-201ENST00000261897 ZNF233A6NK53 670 aa17.56■□□□□ 0.4
PRPF40B-201ENST00000261897 TXKP42681 527 aa17.56■□□□□ 0.4
PRPF40B-201ENST00000261897 BCAMP50895 628 aa17.56■□□□□ 0.4
PRPF40B-201ENST00000261897 GNPTABQ3T906 1256 aa17.56■□□□□ 0.4
PRPF40B-201ENST00000261897 NSMCE1Q8WV22 266 aa17.56■□□□□ 0.4
PRPF40B-201ENST00000261897 TBC1D5Q92609 795 aa17.56■□□□□ 0.4
PRPF40B-201ENST00000261897 DDX20Q9UHI6 824 aaKnown RBP17.56■□□□□ 0.4
PRPF40B-201ENST00000261897 TMEM110-MUSTN1A8MSY1 372 aa17.55■□□□□ 0.4
PRPF40B-201ENST00000261897 DHX9Q08211 1270 aaKnown RBP17.55■□□□□ 0.4
PRPF40B-201ENST00000261897 RABL6Q3YEC7 729 aaPredicted RBP17.55■□□□□ 0.4
PRPF40B-201ENST00000261897 ACCSLQ4AC99 568 aa17.55■□□□□ 0.4
PRPF40B-201ENST00000261897 CREG2Q8IUH2 290 aa17.55■□□□□ 0.4
PRPF40B-201ENST00000261897 CAPN11Q9UMQ6 739 aa17.55■□□□□ 0.4
PRPF40B-201ENST00000261897 CPDO75976 1380 aa17.55■□□□□ 0.4
PRPF40B-201ENST00000261897 SATB1Q01826 763 aa17.55■□□□□ 0.4
PRPF40B-201ENST00000261897 CCDC38Q502W7 563 aa17.55■□□□□ 0.4
PRPF40B-201ENST00000261897 OTUD6AQ7L8S5 288 aa17.55■□□□□ 0.4
PRPF40B-201ENST00000261897 ABCA9Q8IUA7 1624 aa17.55■□□□□ 0.4
PRPF40B-201ENST00000261897 ANKRD26Q9UPS8 1709 aa17.55■□□□□ 0.4
PRPF40B-201ENST00000261897 DIAPH2O60879 1101 aa17.54■□□□□ 0.4
PRPF40B-201ENST00000261897 TECP42680 631 aa17.54■□□□□ 0.4
PRPF40B-201ENST00000261897 CACNB1Q02641 598 aaPredicted RBP17.54■□□□□ 0.4
PRPF40B-201ENST00000261897 RPS6KA1Q15418 735 aa17.54■□□□□ 0.4
PRPF40B-201ENST00000261897 TMTC2Q8N394 836 aa17.54■□□□□ 0.4
PRPF40B-201ENST00000261897 VCPKMTQ9H867 229 aa17.54■□□□□ 0.4
PRPF40B-201ENST00000261897 NBPF26B4DH59 902 aa17.54■□□□□ 0.4
PRPF40B-201ENST00000261897 KRIT1O00522 736 aa17.54■□□□□ 0.4
PRPF40B-201ENST00000261897 BMP15O95972 392 aa17.54■□□□□ 0.4
PRPF40B-201ENST00000261897 GCFC2P16383 781 aaKnown RBP17.54■□□□□ 0.4
PRPF40B-201ENST00000261897 SESN3P58005 492 aa17.54■□□□□ 0.4
PRPF40B-201ENST00000261897 LRRC14Q15048 493 aa17.54■□□□□ 0.4
PRPF40B-201ENST00000261897 ANKRD40Q6AI12 368 aa17.54■□□□□ 0.4
PRPF40B-201ENST00000261897 NBPF10Q6P3W6 841 aaKnown RBP17.54■□□□□ 0.4
PRPF40B-201ENST00000261897 NBPF15Q8N660 670 aa17.54■□□□□ 0.4
PRPF40B-201ENST00000261897 EPB41L4AQ9HCS5 686 aaPredicted RBP17.54■□□□□ 0.4
PRPF40B-201ENST00000261897 TNRQ92752 1358 aa17.54■□□□□ 0.4
PRPF40B-201ENST00000261897 UBE4AQ14139 1066 aa17.54■□□□□ 0.4
PRPF40B-201ENST00000261897 HLFQ16534 295 aa17.54■□□□□ 0.4
PRPF40B-201ENST00000261897 QPCTQ16769 361 aa17.54■□□□□ 0.4
PRPF40B-201ENST00000261897 AP1ARQ63HQ0 302 aa17.54■□□□□ 0.4
PRPF40B-201ENST00000261897 SPATA5Q8NB90 893 aa17.54■□□□□ 0.4
PRPF40B-201ENST00000261897 SEC16BQ96JE7 1060 aa17.54■□□□□ 0.4
PRPF40B-201ENST00000261897 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.54■□□□□ 0.4
PRPF40B-201ENST00000261897 GOLGA8HP0CJ92 632 aa17.53■□□□□ 0.4
PRPF40B-201ENST00000261897 VEGFAP15692 232 aaPredicted RBP17.53■□□□□ 0.4
PRPF40B-201ENST00000261897 PCK1P35558 622 aa17.53■□□□□ 0.4
PRPF40B-201ENST00000261897 NUP58Q9BVL2 599 aa17.53■□□□□ 0.4
PRPF40B-201ENST00000261897 KCNG1Q9UIX4 513 aa17.53■□□□□ 0.4
PRPF40B-201ENST00000261897 FBXL5Q9UKA1 691 aa17.53■□□□□ 0.4
PRPF40B-201ENST00000261897 NCAPD2Q15021 1401 aa17.53■□□□□ 0.4
PRPF40B-201ENST00000261897 UTYO14607 1347 aa17.53■□□□□ 0.4
PRPF40B-201ENST00000261897 H7C1W4 665 aa17.53■□□□□ 0.4
PRPF40B-201ENST00000261897 RAD51CO43502 376 aa17.53■□□□□ 0.4
PRPF40B-201ENST00000261897 KLHL30Q0D2K2 578 aa17.53■□□□□ 0.4
PRPF40B-201ENST00000261897 CASKIN2Q8WXE0 1202 aa17.53■□□□□ 0.4
PRPF40B-201ENST00000261897 MRRFQ96E11 262 aaKnown RBP17.53■□□□□ 0.4
PRPF40B-201ENST00000261897 MPHOSPH10O00566 681 aaKnown RBP17.53■□□□□ 0.4
PRPF40B-201ENST00000261897 IRS4O14654 1257 aaPredicted RBP17.53■□□□□ 0.4
PRPF40B-201ENST00000261897 CCNT1O60563 726 aaKnown RBP17.53■□□□□ 0.4
PRPF40B-201ENST00000261897 FAM107AO95990 144 aa17.53■□□□□ 0.4
PRPF40B-201ENST00000261897 COPB2P35606 906 aa17.53■□□□□ 0.4
PRPF40B-201ENST00000261897 PBX1P40424 430 aa17.53■□□□□ 0.4
PRPF40B-201ENST00000261897 ZNF579Q8NAF0 562 aaKnown RBP17.53■□□□□ 0.4
PRPF40B-201ENST00000261897 SGSM3Q96HU1 749 aa17.53■□□□□ 0.4
PRPF40B-201ENST00000261897 SPATS2LQ9NUQ6 558 aaKnown RBP17.53■□□□□ 0.4
PRPF40B-201ENST00000261897 DAPK3O43293 454 aa17.52■□□□□ 0.4
PRPF40B-201ENST00000261897 PDHA1P08559 390 aa17.52■□□□□ 0.4
PRPF40B-201ENST00000261897 SLC5A1P13866 664 aa17.52■□□□□ 0.4
PRPF40B-201ENST00000261897 PHKG2P15735 406 aa17.52■□□□□ 0.4
PRPF40B-201ENST00000261897 SLC8A1P32418 973 aa17.52■□□□□ 0.4
PRPF40B-201ENST00000261897 LIFRP42702 1097 aa17.52■□□□□ 0.4
PRPF40B-201ENST00000261897 STK4Q13043 487 aa17.52■□□□□ 0.4
PRPF40B-201ENST00000261897 SLC9C1Q4G0N8 1177 aa17.52■□□□□ 0.4
PRPF40B-201ENST00000261897 FAM133AQ8N9E0 248 aa17.52■□□□□ 0.4
PRPF40B-201ENST00000261897 MTMR8Q96EF0 704 aa17.52■□□□□ 0.4
PRPF40B-201ENST00000261897 AMACRQ9UHK6 382 aa17.52■□□□□ 0.4
PRPF40B-201ENST00000261897 ANO9A1A5B4 782 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms