RNA–Protein interactions for RNA: ENST00000261866.11

SPG11-201, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPG11, Length 7,774 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-201ENST00000261866 ELF2Q15723 593 aa13.34□□□□□ -0.27
SPG11-201ENST00000261866 MIS18BP1Q6P0N0 1132 aa13.34□□□□□ -0.27
SPG11-201ENST00000261866 GTF2A1P52655 376 aaPredicted RBP13.34□□□□□ -0.27
SPG11-201ENST00000261866 SYDE2Q5VT97 1194 aa13.34□□□□□ -0.27
SPG11-201ENST00000261866 TBC1D9BQ66K14 1250 aa13.34□□□□□ -0.27
SPG11-201ENST00000261866 KIAA1841Q6NSI8 718 aa13.34□□□□□ -0.27
SPG11-201ENST00000261866 HDXQ7Z353 690 aa13.34□□□□□ -0.27
SPG11-201ENST00000261866 NBPF11Q86T75 865 aa13.34□□□□□ -0.27
SPG11-201ENST00000261866 RSPH3Q86UC2 560 aa13.34□□□□□ -0.27
SPG11-201ENST00000261866 RNF181Q9P0P0 153 aa13.34□□□□□ -0.27
SPG11-201ENST00000261866 NXF1Q9UBU9 619 aaKnown RBP13.34□□□□□ -0.27
SPG11-201ENST00000261866 SEMA3EO15041 775 aa13.34□□□□□ -0.27
SPG11-201ENST00000261866 THAP12O43422 761 aa13.34□□□□□ -0.27
SPG11-201ENST00000261866 LRRN2O75325 713 aa13.34□□□□□ -0.27
SPG11-201ENST00000261866 BMP3P12645 472 aa13.34□□□□□ -0.27
SPG11-201ENST00000261866 TFAMQ00059 246 aaKnown RBP13.34□□□□□ -0.27
SPG11-201ENST00000261866 ZNF274Q96GC6 653 aaPredicted RBP13.34□□□□□ -0.27
SPG11-201ENST00000261866 TDRD3Q9H7E2 651 aaKnown RBP13.34□□□□□ -0.27
SPG11-201ENST00000261866 HESX1Q9UBX0 185 aa13.34□□□□□ -0.27
SPG11-201ENST00000261866 GOLGA8IPA6NC78 632 aa13.34□□□□□ -0.27
SPG11-201ENST00000261866 GOLGA8JA6NMD2 632 aa13.34□□□□□ -0.27
SPG11-201ENST00000261866 KCNQ2O43526 872 aa13.34□□□□□ -0.27
SPG11-201ENST00000261866 CTTNQ14247 550 aaKnown RBP13.34□□□□□ -0.27
SPG11-201ENST00000261866 PPP2R5BQ15173 497 aa13.34□□□□□ -0.27
SPG11-201ENST00000261866 HHATQ5VTY9 493 aa13.34□□□□□ -0.27
SPG11-201ENST00000261866 PALM2Q8IXS6 379 aa13.34□□□□□ -0.27
SPG11-201ENST00000261866 KMT5AQ9NQR1 393 aa13.34□□□□□ -0.27
SPG11-201ENST00000261866 FAM135BQ49AJ0 1406 aa13.34□□□□□ -0.27
SPG11-201ENST00000261866 CD58P19256 250 aa13.34□□□□□ -0.27
SPG11-201ENST00000261866 PLEKHF1Q96S99 279 aa13.34□□□□□ -0.27
SPG11-201ENST00000261866 ARMCX3Q9UH62 379 aaPredicted RBP13.34□□□□□ -0.27
SPG11-201ENST00000261866 FAM184BQ9ULE4 1060 aa13.34□□□□□ -0.27
SPG11-201ENST00000261866 MKRN1Q9UHC7 482 aaKnown RBP13.34□□□□□ -0.27
SPG11-201ENST00000261866 PFKFB2O60825 505 aa13.33□□□□□ -0.27
SPG11-201ENST00000261866 MYL7Q01449 175 aa13.33□□□□□ -0.27
SPG11-201ENST00000261866 NLRP4Q96MN2 994 aa13.33□□□□□ -0.27
SPG11-201ENST00000261866 PCDHA7Q9UN72 937 aa13.33□□□□□ -0.27
SPG11-201ENST00000261866 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.33□□□□□ -0.277e-9■■■□□ 17.9
SPG11-201ENST00000261866 DDIT3P35638 169 aa13.33□□□□□ -0.28
SPG11-201ENST00000261866 IREB2P48200 963 aaKnown RBP13.33□□□□□ -0.28
SPG11-201ENST00000261866 CHMP6Q96FZ7 201 aa13.33□□□□□ -0.28
SPG11-201ENST00000261866 SUDS3Q9H7L9 328 aaPredicted RBP13.33□□□□□ -0.28
SPG11-201ENST00000261866 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.33□□□□□ -0.28
SPG11-201ENST00000261866 PIM2Q9P1W9 311 aa13.33□□□□□ -0.28
SPG11-201ENST00000261866 ZSCAN20P17040 1043 aaPredicted RBP13.33□□□□□ -0.28
SPG11-201ENST00000261866 YWHAEP62258 255 aaKnown RBP13.33□□□□□ -0.28
SPG11-201ENST00000261866 SCYL1Q96KG9 808 aa13.33□□□□□ -0.28
SPG11-201ENST00000261866 SMYD2Q9NRG4 433 aa13.33□□□□□ -0.28
SPG11-201ENST00000261866 TXNDC9O14530 226 aa13.33□□□□□ -0.28
SPG11-201ENST00000261866 ADCY8P40145 1251 aa13.33□□□□□ -0.28
SPG11-201ENST00000261866 NR5A1Q13285 461 aa13.33□□□□□ -0.28
SPG11-201ENST00000261866 NXNQ6DKJ4 435 aa13.33□□□□□ -0.28
SPG11-201ENST00000261866 KRT12Q99456 494 aa13.33□□□□□ -0.28
SPG11-201ENST00000261866 AMFRQ9UKV5 643 aa13.33□□□□□ -0.28
SPG11-201ENST00000261866 PRR36Q9H6K5 1346 aa13.33□□□□□ -0.28
SPG11-201ENST00000261866 GOLGA8SH3BPF8 625 aa13.33□□□□□ -0.28
SPG11-201ENST00000261866 ADALQ6DHV7 355 aa13.33□□□□□ -0.28
SPG11-201ENST00000261866 RASEFQ8IZ41 740 aa13.33□□□□□ -0.28
SPG11-201ENST00000261866 SERPINB13Q9UIV8 391 aa13.33□□□□□ -0.28
SPG11-201ENST00000261866 USP14P54578 494 aa13.33□□□□□ -0.28
SPG11-201ENST00000261866 GBP6Q6ZN66 633 aa13.33□□□□□ -0.28
SPG11-201ENST00000261866 PCDHA4Q9UN74 947 aa13.33□□□□□ -0.28
SPG11-201ENST00000261866 RIOK3O14730 519 aaKnown RBP13.32□□□□□ -0.28
SPG11-201ENST00000261866 NPR1P16066 1061 aa13.32□□□□□ -0.28
SPG11-201ENST00000261866 DYNLT1P63172 113 aa13.32□□□□□ -0.28
SPG11-201ENST00000261866 FYB2Q5VWT5 728 aa13.32□□□□□ -0.28
SPG11-201ENST00000261866 FANCLQ9NW38 375 aa13.32□□□□□ -0.28
SPG11-201ENST00000261866 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.32□□□□□ -0.28
SPG11-201ENST00000261866 PLEKHG1Q9ULL1 1385 aa13.32□□□□□ -0.28
SPG11-201ENST00000261866 BBOX1O75936 387 aa13.32□□□□□ -0.28
SPG11-201ENST00000261866 ADD2P35612 726 aa13.32□□□□□ -0.28
SPG11-201ENST00000261866 GRAPQ13588 217 aa13.32□□□□□ -0.28
SPG11-201ENST00000261866 RSRC2Q7L4I2 434 aaKnown RBP13.32□□□□□ -0.28
SPG11-201ENST00000261866 GRAPLQ8TC17 118 aaPredicted RBP13.32□□□□□ -0.28
SPG11-201ENST00000261866 IRAK4Q9NWZ3 460 aa13.32□□□□□ -0.28
SPG11-201ENST00000261866 GH2P01242 217 aa13.32□□□□□ -0.28
SPG11-201ENST00000261866 IFT20Q8IY31 132 aa13.32□□□□□ -0.28
SPG11-201ENST00000261866 PARD3BQ8TEW8 1205 aa13.32□□□□□ -0.28
SPG11-201ENST00000261866 PRPF31Q8WWY3 499 aaKnown RBP13.32□□□□□ -0.28
SPG11-201ENST00000261866 FAM149B1Q96BN6 582 aa13.32□□□□□ -0.28
SPG11-201ENST00000261866 ZBED2Q9BTP6 218 aa13.32□□□□□ -0.28
SPG11-201ENST00000261866 RAVER2Q9HCJ3 691 aaKnown RBP13.32□□□□□ -0.28
SPG11-201ENST00000261866 SWAP70Q9UH65 585 aa13.32□□□□□ -0.28
SPG11-201ENST00000261866 PPFIA1Q13136 1202 aa13.32□□□□□ -0.28
SPG11-201ENST00000261866 SETD1BQ9UPS6 1966 aaKnown RBP13.32□□□□□ -0.28
SPG11-201ENST00000261866 ADCY1Q08828 1119 aa13.32□□□□□ -0.28
SPG11-201ENST00000261866 RASGRF1Q13972 1273 aa13.32□□□□□ -0.28
SPG11-201ENST00000261866 CDC37Q16543 378 aaPredicted RBP13.32□□□□□ -0.28
SPG11-201ENST00000261866 OSBP2Q969R2 916 aa13.32□□□□□ -0.28
SPG11-201ENST00000261866 ECE2O60344 883 aa13.32□□□□□ -0.28
SPG11-201ENST00000261866 TFDP1Q14186 410 aa13.32□□□□□ -0.28
SPG11-201ENST00000261866 PPP1R12CQ9BZL4 782 aa13.32□□□□□ -0.28
SPG11-201ENST00000261866 INPP5FQ9Y2H2 1132 aa13.32□□□□□ -0.28
SPG11-201ENST00000261866 NFX1Q12986 1120 aaKnown RBP13.31□□□□□ -0.28
SPG11-201ENST00000261866 FAM83BQ5T0W9 1011 aa13.31□□□□□ -0.28
SPG11-201ENST00000261866 AIFM3Q96NN9 605 aa13.31□□□□□ -0.28
SPG11-201ENST00000261866 ZSWIM6Q9HCJ5 1215 aa13.31□□□□□ -0.28
SPG11-201ENST00000261866 LMBRD1Q9NUN5 540 aa13.31□□□□□ -0.28
SPG11-201ENST00000261866 SNX1Q13596 522 aa13.31□□□□□ -0.28
SPG11-201ENST00000261866 SDCCAG8Q86SQ7 713 aaPredicted RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms