RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 SLC4A3P48751 1232 aa13.42□□□□□ -0.26
PFDN1-201ENST00000261813 RCAN1P53805 252 aa13.42□□□□□ -0.26
PFDN1-201ENST00000261813 PRKCZQ05513 592 aa13.42□□□□□ -0.26
PFDN1-201ENST00000261813 ARHGEF6Q15052 776 aa13.42□□□□□ -0.26
PFDN1-201ENST00000261813 CDC37Q16543 378 aaPredicted RBP13.42□□□□□ -0.26
PFDN1-201ENST00000261813 WDR78Q5VTH9 848 aa13.42□□□□□ -0.26
PFDN1-201ENST00000261813 TYW1BQ6NUM6 668 aa13.42□□□□□ -0.26
PFDN1-201ENST00000261813 CCAR1Q8IX12 1150 aaKnown RBP13.42□□□□□ -0.26
PFDN1-201ENST00000261813 CMTR1Q8N1G2 835 aaKnown RBP13.42□□□□□ -0.26
PFDN1-201ENST00000261813 SRBD1Q8N5C6 995 aaKnown RBP13.42□□□□□ -0.26
PFDN1-201ENST00000261813 COA7Q96BR5 231 aa13.42□□□□□ -0.26
PFDN1-201ENST00000261813 MTMR8Q96EF0 704 aa13.42□□□□□ -0.26
PFDN1-201ENST00000261813 EPAS1Q99814 870 aa13.42□□□□□ -0.26
PFDN1-201ENST00000261813 ADAM33Q9BZ11 813 aa13.42□□□□□ -0.26
PFDN1-201ENST00000261813 MROH8Q9H579 483 aa13.42□□□□□ -0.26
PFDN1-201ENST00000261813 FAM217BQ9NTX9 383 aaPredicted RBP13.42□□□□□ -0.26
PFDN1-201ENST00000261813 GJD2Q9UKL4 321 aa13.42□□□□□ -0.26
PFDN1-201ENST00000261813 NAP1L2Q9ULW6 460 aaPredicted RBP13.42□□□□□ -0.26
PFDN1-201ENST00000261813 LIMCH1Q9UPQ0 1083 aa13.42□□□□□ -0.26
PFDN1-201ENST00000261813 PLXNB2O15031 1838 aa13.42□□□□□ -0.26
PFDN1-201ENST00000261813 PTPREP23469 700 aa13.41□□□□□ -0.26
PFDN1-201ENST00000261813 PDIA3P30101 505 aaKnown RBP13.41□□□□□ -0.26
PFDN1-201ENST00000261813 CDC27P30260 824 aa13.41□□□□□ -0.26
PFDN1-201ENST00000261813 GNAQP50148 359 aa13.41□□□□□ -0.26
PFDN1-201ENST00000261813 METAP2P50579 478 aaKnown RBP eCLIP13.41□□□□□ -0.26
PFDN1-201ENST00000261813 AK2P54819 239 aa13.41□□□□□ -0.26
PFDN1-201ENST00000261813 GRB14Q14449 540 aa13.41□□□□□ -0.26
PFDN1-201ENST00000261813 RTN1Q16799 776 aa13.41□□□□□ -0.26
PFDN1-201ENST00000261813 QRICH1Q2TAL8 776 aa13.41□□□□□ -0.26
PFDN1-201ENST00000261813 MORN1Q5T089 497 aa13.41□□□□□ -0.26
PFDN1-201ENST00000261813 TMTC3Q6ZXV5 915 aa13.41□□□□□ -0.26
PFDN1-201ENST00000261813 USP6NLQ92738 828 aa13.41□□□□□ -0.26
PFDN1-201ENST00000261813 SPZ1Q9BXG8 430 aa13.41□□□□□ -0.26
PFDN1-201ENST00000261813 CWC22Q9HCG8 908 aaKnown RBP13.41□□□□□ -0.26
PFDN1-201ENST00000261813 SH2B1Q9NRF2 756 aaPredicted RBP13.41□□□□□ -0.26
PFDN1-201ENST00000261813 CCPG1Q9ULG6 757 aa13.41□□□□□ -0.26
PFDN1-201ENST00000261813 PTPN22Q9Y2R2 807 aa13.41□□□□□ -0.26
PFDN1-201ENST00000261813 PTCH2Q9Y6C5 1203 aa13.41□□□□□ -0.26
PFDN1-201ENST00000261813 SLC15A5A6NIM6 579 aa13.4□□□□□ -0.26
PFDN1-201ENST00000261813 PPP1R11O60927 126 aaPredicted RBP13.4□□□□□ -0.26
PFDN1-201ENST00000261813 ALAS1P13196 640 aa13.4□□□□□ -0.26
PFDN1-201ENST00000261813 HOXD10P28358 340 aa13.4□□□□□ -0.26
PFDN1-201ENST00000261813 COPB2P35606 906 aa13.4□□□□□ -0.26
PFDN1-201ENST00000261813 FLT3LGP49771 235 aa13.4□□□□□ -0.26
PFDN1-201ENST00000261813 PRMT2P55345 433 aa13.4□□□□□ -0.26
PFDN1-201ENST00000261813 HOMER1Q86YM7 354 aa13.4□□□□□ -0.26
PFDN1-201ENST00000261813 PIGSQ96S52 555 aa13.4□□□□□ -0.26
PFDN1-201ENST00000261813 LZTS2Q9BRK4 669 aa13.4□□□□□ -0.26
PFDN1-201ENST00000261813 HOMER2Q9NSB8 354 aa13.4□□□□□ -0.26
PFDN1-201ENST00000261813 RNF146Q9NTX7 359 aa13.4□□□□□ -0.26
PFDN1-201ENST00000261813 RBM28Q9NW13 759 aaKnown RBP13.4□□□□□ -0.26
PFDN1-201ENST00000261813 TPCN1Q9ULQ1 816 aa13.4□□□□□ -0.26
PFDN1-201ENST00000261813 CNTNAP5Q8WYK1 1306 aa13.39□□□□□ -0.27
PFDN1-201ENST00000261813 ZNF236Q9UL36 1845 aa13.39□□□□□ -0.27
PFDN1-201ENST00000261813 ZBTB5O15062 677 aa13.39□□□□□ -0.27
PFDN1-201ENST00000261813 HSP90AA1P07900 732 aaKnown RBP13.39□□□□□ -0.27
PFDN1-201ENST00000261813 SMARCA1P28370 1054 aa13.39□□□□□ -0.27
PFDN1-201ENST00000261813 ADD1P35611 737 aaKnown RBP13.39□□□□□ -0.27
PFDN1-201ENST00000261813 PSEN2P49810 448 aa13.39□□□□□ -0.27
PFDN1-201ENST00000261813 FUT2Q10981 343 aa13.39□□□□□ -0.27
PFDN1-201ENST00000261813 TKFCQ3LXA3 575 aa13.39□□□□□ -0.27
PFDN1-201ENST00000261813 MUM1L1Q5H9M0 696 aa13.39□□□□□ -0.27
PFDN1-201ENST00000261813 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.39□□□□□ -0.27
PFDN1-201ENST00000261813 ABRAQ8N0Z2 381 aa13.39□□□□□ -0.27
PFDN1-201ENST00000261813 CCDC82Q8N4S0 544 aa13.39□□□□□ -0.27
PFDN1-201ENST00000261813 CHST13Q8NET6 341 aa13.39□□□□□ -0.27
PFDN1-201ENST00000261813 SOCS4Q8WXH5 440 aa13.39□□□□□ -0.27
PFDN1-201ENST00000261813 PIBF1Q8WXW3 757 aa13.39□□□□□ -0.27
PFDN1-201ENST00000261813 ZNF274Q96GC6 653 aaPredicted RBP13.39□□□□□ -0.27
PFDN1-201ENST00000261813 TRERF1Q96PN7 1200 aa13.39□□□□□ -0.27
PFDN1-201ENST00000261813 MMP19Q99542 508 aa13.39□□□□□ -0.27
PFDN1-201ENST00000261813 NUDT12Q9BQG2 462 aa13.39□□□□□ -0.27
PFDN1-201ENST00000261813 ACAD9Q9H845 621 aa13.39□□□□□ -0.27
PFDN1-201ENST00000261813 IVNS1ABPQ9Y6Y0 642 aa13.39□□□□□ -0.27
PFDN1-201ENST00000261813 STRNO43815 780 aa13.38□□□□□ -0.27
PFDN1-201ENST00000261813 CYP2B6P20813 491 aa13.38□□□□□ -0.27
PFDN1-201ENST00000261813 ADORA2AP29274 412 aa13.38□□□□□ -0.27
PFDN1-201ENST00000261813 CCT2P78371 535 aaKnown RBP13.38□□□□□ -0.27
PFDN1-201ENST00000261813 MAP2K5Q13163 448 aa13.38□□□□□ -0.27
PFDN1-201ENST00000261813 IRF5Q13568 498 aa13.38□□□□□ -0.27
PFDN1-201ENST00000261813 USH1GQ495M9 461 aa13.38□□□□□ -0.27
PFDN1-201ENST00000261813 NOL8Q76FK4 1167 aaKnown RBP13.38□□□□□ -0.27
PFDN1-201ENST00000261813 FBXO11Q86XK2 927 aa13.38□□□□□ -0.27
PFDN1-201ENST00000261813 CLEC4DQ8WXI8 215 aa13.38□□□□□ -0.27
PFDN1-201ENST00000261813 DDX12PQ92771 950 aa13.38□□□□□ -0.27
PFDN1-201ENST00000261813 NCOA5Q9HCD5 579 aaKnown RBP13.38□□□□□ -0.27
PFDN1-201ENST00000261813 FBXO40Q9UH90 709 aa13.38□□□□□ -0.27
PFDN1-201ENST00000261813 PNMA6FA0A0J9YX94 578 aa13.37□□□□□ -0.27
PFDN1-201ENST00000261813 hCG_1642624A0A1W2PR95 340 aa13.37□□□□□ -0.27
PFDN1-201ENST00000261813 NFIBO00712 420 aa13.37□□□□□ -0.27
PFDN1-201ENST00000261813 COBLO75128 1261 aa13.37□□□□□ -0.27
PFDN1-201ENST00000261813 LARGE1O95461 756 aa13.37□□□□□ -0.27
PFDN1-201ENST00000261813 FCER1AP12319 257 aa13.37□□□□□ -0.27
PFDN1-201ENST00000261813 RGS2P41220 211 aa13.37□□□□□ -0.27
PFDN1-201ENST00000261813 STK3Q13188 491 aa13.37□□□□□ -0.27
PFDN1-201ENST00000261813 KCTD2Q14681 263 aa13.37□□□□□ -0.27
PFDN1-201ENST00000261813 PPP2R5BQ15173 497 aa13.37□□□□□ -0.27
PFDN1-201ENST00000261813 DMRTA1Q5VZB9 504 aa13.37□□□□□ -0.27
PFDN1-201ENST00000261813 NPLOC4Q8TAT6 608 aa13.37□□□□□ -0.27
PFDN1-201ENST00000261813 RAET1EQ8TD07 263 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms