RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 NOC4LQ9BVI4 516 aaKnown RBP16.17■□□□□ 0.18
SFSWAP-201ENST00000261674 HAUS4Q9H6D7 363 aa16.17■□□□□ 0.18
SFSWAP-201ENST00000261674 FAM207AQ9NSI2 230 aaPredicted RBP16.17■□□□□ 0.18
SFSWAP-201ENST00000261674 RAB21Q9UL25 225 aa16.17■□□□□ 0.18
SFSWAP-201ENST00000261674 MYH6P13533 1939 aa16.17■□□□□ 0.18
SFSWAP-201ENST00000261674 RCCD1A6NED2 376 aa16.17■□□□□ 0.18
SFSWAP-201ENST00000261674 CCNT1O60563 726 aaKnown RBP16.17■□□□□ 0.18
SFSWAP-201ENST00000261674 CXCR5P32302 372 aa16.17■□□□□ 0.18
SFSWAP-201ENST00000261674 PDE6BP35913 854 aa16.17■□□□□ 0.18
SFSWAP-201ENST00000261674 TECP42680 631 aa16.17■□□□□ 0.18
SFSWAP-201ENST00000261674 ENOX2Q16206 610 aaKnown RBP16.17■□□□□ 0.18
SFSWAP-201ENST00000261674 NAALADL2Q58DX5 795 aa16.17■□□□□ 0.18
SFSWAP-201ENST00000261674 ZNF444Q8N0Y2 327 aaPredicted RBP16.17■□□□□ 0.18
SFSWAP-201ENST00000261674 DEF6Q9H4E7 631 aa16.17■□□□□ 0.18
SFSWAP-201ENST00000261674 SLC39A2Q9NP94 309 aa16.17■□□□□ 0.18
SFSWAP-201ENST00000261674 TCP11L1Q9NUJ3 509 aa16.17■□□□□ 0.18
SFSWAP-201ENST00000261674 EXOC1Q9NV70 894 aa16.17■□□□□ 0.18
SFSWAP-201ENST00000261674 NID2Q14112 1375 aa16.16■□□□□ 0.18
SFSWAP-201ENST00000261674 LGALS16A8MUM7 142 aa16.16■□□□□ 0.18
SFSWAP-201ENST00000261674 NKRFO15226 690 aaKnown RBP eCLIP16.16■□□□□ 0.181e-6■□□□□ 10.8
SFSWAP-201ENST00000261674 SCNN1DP51172 638 aa16.16■□□□□ 0.18
SFSWAP-201ENST00000261674 HERVK_113P62684 666 aa16.16■□□□□ 0.18
SFSWAP-201ENST00000261674 TBC1D16Q8TBP0 767 aa16.16■□□□□ 0.18
SFSWAP-201ENST00000261674 HNRNPLLQ8WVV9 542 aaKnown RBP16.16■□□□□ 0.18
SFSWAP-201ENST00000261674 ACBD3Q9H3P7 528 aa16.16■□□□□ 0.18
SFSWAP-201ENST00000261674 MMRN2Q9H8L6 949 aa16.16■□□□□ 0.18
SFSWAP-201ENST00000261674 PCDHA4Q9UN74 947 aa16.16■□□□□ 0.18
SFSWAP-201ENST00000261674 PLEKP08567 350 aaPredicted RBP16.16■□□□□ 0.18
SFSWAP-201ENST00000261674 PLCG1P19174 1290 aa16.16■□□□□ 0.18
SFSWAP-201ENST00000261674 CYLC1P35663 651 aaPredicted RBP16.16■□□□□ 0.18
SFSWAP-201ENST00000261674 TRAPPC10P48553 1259 aa16.16■□□□□ 0.18
SFSWAP-201ENST00000261674 STK4Q13043 487 aa16.16■□□□□ 0.18
SFSWAP-201ENST00000261674 WDR59Q6PJI9 974 aa16.16■□□□□ 0.18
SFSWAP-201ENST00000261674 DYMQ7RTS9 669 aa16.16■□□□□ 0.18
SFSWAP-201ENST00000261674 CCDC42Q96M95 316 aa16.16■□□□□ 0.18
SFSWAP-201ENST00000261674 CRACR2AQ9BSW2 395 aa16.16■□□□□ 0.18
SFSWAP-201ENST00000261674 ZC3H12CQ9C0D7 883 aaKnown RBP16.16■□□□□ 0.18
SFSWAP-201ENST00000261674 NAPAP54920 295 aa16.15■□□□□ 0.18
SFSWAP-201ENST00000261674 C2orf54Q08AI8 447 aa16.15■□□□□ 0.18
SFSWAP-201ENST00000261674 TUBB2AQ13885 445 aa16.15■□□□□ 0.18
SFSWAP-201ENST00000261674 RCSD1Q6JBY9 416 aa16.15■□□□□ 0.18
SFSWAP-201ENST00000261674 GOLGA5Q8TBA6 731 aa16.15■□□□□ 0.18
SFSWAP-201ENST00000261674 CCDC47Q96A33 483 aaKnown RBP16.15■□□□□ 0.18
SFSWAP-201ENST00000261674 PYM1Q9BRP8 204 aaKnown RBP16.15■□□□□ 0.18
SFSWAP-201ENST00000261674 TUBB2BQ9BVA1 445 aa16.15■□□□□ 0.18
SFSWAP-201ENST00000261674 NHEJ1Q9H9Q4 299 aaPredicted RBP16.15■□□□□ 0.18
SFSWAP-201ENST00000261674 KRT83P78385 493 aa16.15■□□□□ 0.18
SFSWAP-201ENST00000261674 CRY2Q49AN0 593 aa16.15■□□□□ 0.18
SFSWAP-201ENST00000261674 DNAJC21Q5F1R6 531 aaKnown RBP16.15■□□□□ 0.18
SFSWAP-201ENST00000261674 CABP7Q86V35 215 aa16.15■□□□□ 0.18
SFSWAP-201ENST00000261674 CNOT6LQ96LI5 555 aaKnown RBP16.15■□□□□ 0.18
SFSWAP-201ENST00000261674 ANKRD2Q9GZV1 360 aa16.15■□□□□ 0.18
SFSWAP-201ENST00000261674 FEZ2Q9UHY8 353 aaPredicted RBP16.15■□□□□ 0.18
SFSWAP-201ENST00000261674 MYO1CO00159 1063 aa16.15■□□□□ 0.18
SFSWAP-201ENST00000261674 RNF40O75150 1001 aa16.15■□□□□ 0.18
SFSWAP-201ENST00000261674 TXKP42681 527 aa16.15■□□□□ 0.18
SFSWAP-201ENST00000261674 KIF5AQ12840 1032 aa16.15■□□□□ 0.18
SFSWAP-201ENST00000261674 SPA17Q15506 151 aa16.15■□□□□ 0.18
SFSWAP-201ENST00000261674 ANKRD40Q6AI12 368 aa16.15■□□□□ 0.18
SFSWAP-201ENST00000261674 TGFBRAP1Q8WUH2 860 aa16.15■□□□□ 0.18
SFSWAP-201ENST00000261674 TANGO6Q9C0B7 1094 aa16.15■□□□□ 0.18
SFSWAP-201ENST00000261674 SMARCAL1Q9NZC9 954 aa16.15■□□□□ 0.18
SFSWAP-201ENST00000261674 DNM2P50570 870 aa16.14■□□□□ 0.17
SFSWAP-201ENST00000261674 AMPD2Q01433 879 aa16.14■□□□□ 0.17
SFSWAP-201ENST00000261674 AOC3Q16853 763 aa16.14■□□□□ 0.17
SFSWAP-201ENST00000261674 MAPKAPK5Q8IW41 473 aa16.14■□□□□ 0.17
SFSWAP-201ENST00000261674 MASTLQ96GX5 879 aa16.14■□□□□ 0.17
SFSWAP-201ENST00000261674 MYO1AQ9UBC5 1043 aa16.14■□□□□ 0.17
SFSWAP-201ENST00000261674 LRWD1Q9UFC0 647 aa16.14■□□□□ 0.17
SFSWAP-201ENST00000261674 BCS1LQ9Y276 419 aa16.14■□□□□ 0.17
SFSWAP-201ENST00000261674 UBR3Q6ZT12 1888 aa16.14■□□□□ 0.17
SFSWAP-201ENST00000261674 ECM29Q5VYK3 1845 aa16.14■□□□□ 0.17
SFSWAP-201ENST00000261674 NPR1P16066 1061 aa16.14■□□□□ 0.17
SFSWAP-201ENST00000261674 PPARDQ03181 441 aa16.14■□□□□ 0.17
SFSWAP-201ENST00000261674 ARL6IP4Q66PJ3 421 aaKnown RBP16.14■□□□□ 0.17
SFSWAP-201ENST00000261674 IL17RBQ9NRM6 502 aa16.14■□□□□ 0.17
SFSWAP-201ENST00000261674 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.14■□□□□ 0.17
SFSWAP-201ENST00000261674 TNRC6CQ9HCJ0 1690 aaKnown RBP16.14■□□□□ 0.17
SFSWAP-201ENST00000261674 SLC7A5Q01650 507 aa16.13■□□□□ 0.17
SFSWAP-201ENST00000261674 C4orf32Q8N8J7 132 aa16.13■□□□□ 0.17
SFSWAP-201ENST00000261674 ZNF277Q9NRM2 450 aaPredicted RBP16.13■□□□□ 0.17
SFSWAP-201ENST00000261674 CAPN11Q9UMQ6 739 aa16.13■□□□□ 0.17
SFSWAP-201ENST00000261674 PCDHA6Q9UN73 950 aa16.13■□□□□ 0.17
SFSWAP-201ENST00000261674 PCDHA8Q9Y5H6 950 aa16.13■□□□□ 0.17
SFSWAP-201ENST00000261674 AKR1B10O60218 316 aa16.13■□□□□ 0.17
SFSWAP-201ENST00000261674 BBOX1O75936 387 aa16.13■□□□□ 0.17
SFSWAP-201ENST00000261674 USP14P54578 494 aa16.13■□□□□ 0.17
SFSWAP-201ENST00000261674 CHD4Q14839 1912 aa16.13■□□□□ 0.17
SFSWAP-201ENST00000261674 ANKRD36CQ5JPF3 1778 aa16.13■□□□□ 0.17
SFSWAP-201ENST00000261674 TRAPPC11Q7Z392 1133 aa16.13■□□□□ 0.17
SFSWAP-201ENST00000261674 UBA5Q9GZZ9 404 aa16.13■□□□□ 0.17
SFSWAP-201ENST00000261674 BIN2Q9UBW5 565 aaPredicted RBP16.13■□□□□ 0.17
SFSWAP-201ENST00000261674 RRP15Q9Y3B9 282 aaKnown RBP16.13■□□□□ 0.17
SFSWAP-201ENST00000261674 PCDHAC2Q9Y5I4 1007 aa16.13■□□□□ 0.17
SFSWAP-201ENST00000261674 SLURP2P0DP57 97 aa16.13■□□□□ 0.17
SFSWAP-201ENST00000261674 LRRC15Q8TF66 581 aa16.13■□□□□ 0.17
SFSWAP-201ENST00000261674 ATP8A2Q9NTI2 1148 aa16.13■□□□□ 0.17
SFSWAP-201ENST00000261674 PDE2AO00408 941 aaPredicted RBP16.12■□□□□ 0.17
SFSWAP-201ENST00000261674 ORC4O43929 436 aa16.12■□□□□ 0.17
SFSWAP-201ENST00000261674 SSBP05455 408 aaKnown RBP eCLIP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms