RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 NAT10Q9H0A0 1025 aaKnown RBP8.51□□□□□ -1.05
GPNMB-201ENST00000258733 VCX3AQ9NNX9 186 aa8.51□□□□□ -1.05
GPNMB-201ENST00000258733 CASS4Q9NQ75 786 aa8.51□□□□□ -1.05
GPNMB-201ENST00000258733 SAMM50Q9Y512 469 aa8.51□□□□□ -1.05
GPNMB-201ENST00000258733 SHANK2Q9UPX8 1470 aa8.51□□□□□ -1.05
GPNMB-201ENST00000258733 YEATS2Q9ULM3 1422 aa8.51□□□□□ -1.05
GPNMB-201ENST00000258733 NUP153P49790 1475 aaKnown RBP8.51□□□□□ -1.05
GPNMB-201ENST00000258733 TNFRSF10AO00220 468 aa8.51□□□□□ -1.05
GPNMB-201ENST00000258733 USO1O60763 962 aaKnown RBP8.51□□□□□ -1.05
GPNMB-201ENST00000258733 RNF40O75150 1001 aa8.51□□□□□ -1.05
GPNMB-201ENST00000258733 ATG7O95352 703 aa8.51□□□□□ -1.05
GPNMB-201ENST00000258733 GJA9P57773 515 aa8.51□□□□□ -1.05
GPNMB-201ENST00000258733 PDE4DQ08499 809 aa8.51□□□□□ -1.05
GPNMB-201ENST00000258733 C15orf59Q2T9L4 293 aaPredicted RBP8.51□□□□□ -1.05
GPNMB-201ENST00000258733 LRRC8AQ8IWT6 810 aa8.51□□□□□ -1.05
GPNMB-201ENST00000258733 ABTB2Q8N961 1025 aa8.51□□□□□ -1.05
GPNMB-201ENST00000258733 EPS8L3Q8TE67 593 aaKnown RBP8.51□□□□□ -1.05
GPNMB-201ENST00000258733 DQX1Q8TE96 717 aaKnown RBP8.51□□□□□ -1.05
GPNMB-201ENST00000258733 CNKSR1Q969H4 720 aa8.51□□□□□ -1.05
GPNMB-201ENST00000258733 CARD6Q9BX69 1037 aa8.51□□□□□ -1.05
GPNMB-201ENST00000258733 MTMR12Q9C0I1 747 aa8.51□□□□□ -1.05
GPNMB-201ENST00000258733 CCSER2Q9H7U1 834 aa8.51□□□□□ -1.05
GPNMB-201ENST00000258733 EVLQ9UI08 416 aaPredicted RBP8.51□□□□□ -1.05
GPNMB-201ENST00000258733 ABCC2Q92887 1545 aa8.51□□□□□ -1.05
GPNMB-201ENST00000258733 NCKAP5LQ9HCH0 1330 aa8.5□□□□□ -1.05
GPNMB-201ENST00000258733 ANKRD30BQ9BXX2 1392 aa8.5□□□□□ -1.05
GPNMB-201ENST00000258733 CDC42BPAQ5VT25 1732 aa8.5□□□□□ -1.05
GPNMB-201ENST00000258733 CDK13Q14004 1512 aaKnown RBP8.5□□□□□ -1.05
GPNMB-201ENST00000258733 CCDC169A6NNP5 214 aa8.5□□□□□ -1.05
GPNMB-201ENST00000258733 MAP3K7O43318 606 aa8.5□□□□□ -1.05
GPNMB-201ENST00000258733 KCNA6P17658 529 aa8.5□□□□□ -1.05
GPNMB-201ENST00000258733 ADCY8P40145 1251 aa8.5□□□□□ -1.05
GPNMB-201ENST00000258733 GPC3P51654 580 aa8.5□□□□□ -1.05
GPNMB-201ENST00000258733 RARSP54136 660 aaKnown RBP8.5□□□□□ -1.05
GPNMB-201ENST00000258733 LVRNQ6Q4G3 990 aa8.5□□□□□ -1.05
GPNMB-201ENST00000258733 CCDC42Q96M95 316 aa8.5□□□□□ -1.05
GPNMB-201ENST00000258733 RBM14Q96PK6 669 aaKnown RBP8.5□□□□□ -1.05
GPNMB-201ENST00000258733 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.5□□□□□ -1.05
GPNMB-201ENST00000258733 ACTR5Q9H9F9 607 aaPredicted RBP8.5□□□□□ -1.05
GPNMB-201ENST00000258733 TTC7AQ9ULT0 858 aaPredicted RBP8.5□□□□□ -1.05
GPNMB-201ENST00000258733 ZNF536O15090 1300 aa8.5□□□□□ -1.05
GPNMB-201ENST00000258733 TTC41PQ6P2S7 1318 aa8.5□□□□□ -1.05
GPNMB-201ENST00000258733 UBN2Q6ZU65 1347 aa8.5□□□□□ -1.05
GPNMB-201ENST00000258733 SCAF11Q99590 1463 aaKnown RBP8.5□□□□□ -1.05
GPNMB-201ENST00000258733 HNRNPRO43390 633 aaKnown RBP8.5□□□□□ -1.05
GPNMB-201ENST00000258733 FLOT1O75955 427 aa8.5□□□□□ -1.05
GPNMB-201ENST00000258733 LCA5LO95447 670 aa8.5□□□□□ -1.05
GPNMB-201ENST00000258733 GYS1P13807 737 aa8.5□□□□□ -1.05
GPNMB-201ENST00000258733 HSPA1LP34931 641 aa8.5□□□□□ -1.05
GPNMB-201ENST00000258733 GPSM2P81274 684 aa8.5□□□□□ -1.05
GPNMB-201ENST00000258733 POU5F1BQ06416 359 aa8.5□□□□□ -1.05
GPNMB-201ENST00000258733 PLEKHG6Q3KR16 790 aa8.5□□□□□ -1.05
GPNMB-201ENST00000258733 NAALADL2Q58DX5 795 aa8.5□□□□□ -1.05
GPNMB-201ENST00000258733 SLC27A3Q5K4L6 730 aa8.5□□□□□ -1.05
GPNMB-201ENST00000258733 TBC1D9BQ66K14 1250 aa8.5□□□□□ -1.05
GPNMB-201ENST00000258733 DUS1LQ6P1R4 473 aaKnown RBP8.5□□□□□ -1.05
GPNMB-201ENST00000258733 NLGN1Q8N2Q7 840 aa8.5□□□□□ -1.05
GPNMB-201ENST00000258733 PDCD7Q8N8D1 485 aaKnown RBP8.5□□□□□ -1.05
GPNMB-201ENST00000258733 SCAIQ8N9R8 606 aa8.5□□□□□ -1.05
GPNMB-201ENST00000258733 USP38Q8NB14 1042 aa8.5□□□□□ -1.05
GPNMB-201ENST00000258733 PPP1R14CQ8TAE6 165 aa8.5□□□□□ -1.05
GPNMB-201ENST00000258733 MAML1Q92585 1016 aa8.5□□□□□ -1.05
GPNMB-201ENST00000258733 COG3Q96JB2 828 aa8.5□□□□□ -1.05
GPNMB-201ENST00000258733 FGD4Q96M96 766 aa8.5□□□□□ -1.05
GPNMB-201ENST00000258733 ALPK1Q96QP1 1244 aa8.5□□□□□ -1.05
GPNMB-201ENST00000258733 SIKE1Q9BRV8 207 aa8.5□□□□□ -1.05
GPNMB-201ENST00000258733 ERP44Q9BS26 406 aa8.5□□□□□ -1.05
GPNMB-201ENST00000258733 FAM167BQ9BTA0 163 aa8.5□□□□□ -1.05
GPNMB-201ENST00000258733 CEP44Q9C0F1 390 aa8.5□□□□□ -1.05
GPNMB-201ENST00000258733 GBA3Q9H227 469 aa8.5□□□□□ -1.05
GPNMB-201ENST00000258733 KAT14Q9H8E8 782 aa8.5□□□□□ -1.05
GPNMB-201ENST00000258733 PARVBQ9HBI1 364 aa8.5□□□□□ -1.05
GPNMB-201ENST00000258733 NOD2Q9HC29 1040 aa8.5□□□□□ -1.05
GPNMB-201ENST00000258733 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.5□□□□□ -1.05
GPNMB-201ENST00000258733 CHMP2BQ9UQN3 213 aa8.5□□□□□ -1.05
GPNMB-201ENST00000258733 ZNF711Q9Y462 761 aa8.5□□□□□ -1.05
GPNMB-201ENST00000258733 TRIM17Q9Y577 477 aa8.5□□□□□ -1.05
GPNMB-201ENST00000258733 A0A1B0GVL5 298 aa8.49□□□□□ -1.05
GPNMB-201ENST00000258733 BECN2A8MW95 431 aa8.49□□□□□ -1.05
GPNMB-201ENST00000258733 TMCC2O75069 709 aa8.49□□□□□ -1.05
GPNMB-201ENST00000258733 GLI1P08151 1106 aa8.49□□□□□ -1.05
GPNMB-201ENST00000258733 PORP16435 677 aaPredicted RBP8.49□□□□□ -1.05
GPNMB-201ENST00000258733 ANKDD1AQ495B1 522 aa8.49□□□□□ -1.05
GPNMB-201ENST00000258733 CFAP70Q5T0N1 1121 aa8.49□□□□□ -1.05
GPNMB-201ENST00000258733 DSTYKQ6XUX3 929 aa8.49□□□□□ -1.05
GPNMB-201ENST00000258733 Q6ZUG5 572 aa8.49□□□□□ -1.05
GPNMB-201ENST00000258733 SESTD1Q86VW0 696 aa8.49□□□□□ -1.05
GPNMB-201ENST00000258733 IFNLR1Q8IU57 520 aaPredicted RBP8.49□□□□□ -1.05
GPNMB-201ENST00000258733 CHPFQ8IZ52 775 aa8.49□□□□□ -1.05
GPNMB-201ENST00000258733 FAM9CQ8IZT9 166 aa8.49□□□□□ -1.05
GPNMB-201ENST00000258733 AADATQ8N5Z0 425 aa8.49□□□□□ -1.05
GPNMB-201ENST00000258733 CCHCR1Q8TD31 782 aa8.49□□□□□ -1.05
GPNMB-201ENST00000258733 CHAMP1Q96JM3 812 aa8.49□□□□□ -1.05
GPNMB-201ENST00000258733 NOP53Q9NZM5 478 aaKnown RBP8.49□□□□□ -1.05
GPNMB-201ENST00000258733 ZDHHC9Q9Y397 364 aa8.49□□□□□ -1.05
GPNMB-201ENST00000258733 SH3TC1Q8TE82 1336 aa8.49□□□□□ -1.05
GPNMB-201ENST00000258733 ABCC5O15440 1437 aa8.49□□□□□ -1.05
GPNMB-201ENST00000258733 PZPP20742 1482 aa8.49□□□□□ -1.05
GPNMB-201ENST00000258733 KDM5CP41229 1560 aa8.49□□□□□ -1.05
GPNMB-201ENST00000258733 GRXCR2A6NFK2 248 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms