RNA–Protein interactions for RNA: ENST00000257765.9

KHDC1-201, Transcript of KH domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KHDC1, Length 1,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1-201ENST00000257765 ANKRD45Q5TZF3 282 aa21.78■■□□□ 1.08
KHDC1-201ENST00000257765 FRMPD2Q68DX3 1309 aaPredicted RBP21.78■■□□□ 1.08
KHDC1-201ENST00000257765 PTPDC1A2A3K4 754 aa21.77■■□□□ 1.08
KHDC1-201ENST00000257765 OTOP2Q7RTS6 562 aa21.77■■□□□ 1.08
KHDC1-201ENST00000257765 TMEM47Q9BQJ4 181 aa21.77■■□□□ 1.08
KHDC1-201ENST00000257765 WNT8AQ9H1J5 351 aa21.77■■□□□ 1.08
KHDC1-201ENST00000257765 GPCPD1Q9NPB8 672 aa21.77■■□□□ 1.08
KHDC1-201ENST00000257765 POLR3EQ9NVU0 708 aa21.77■■□□□ 1.08
KHDC1-201ENST00000257765 A0A0D9SFI3 127 aa21.76■■□□□ 1.07
KHDC1-201ENST00000257765 PDE1AP54750 535 aa21.76■■□□□ 1.07
KHDC1-201ENST00000257765 AKNAD1Q5T1N1 836 aa21.76■■□□□ 1.07
KHDC1-201ENST00000257765 SLC30A10Q6XR72 485 aa21.76■■□□□ 1.07
KHDC1-201ENST00000257765 PPM1EQ8WY54 764 aa21.76■■□□□ 1.07
KHDC1-201ENST00000257765 FAM227BQ96M60 508 aa21.76■■□□□ 1.07
KHDC1-201ENST00000257765 WDR11Q9BZH6 1224 aa21.76■■□□□ 1.07
KHDC1-201ENST00000257765 ALDH8A1Q9H2A2 487 aaPredicted RBP21.76■■□□□ 1.07
KHDC1-201ENST00000257765 NKX2-4Q9H2Z4 354 aa21.76■■□□□ 1.07
KHDC1-201ENST00000257765 TCP11L1Q9NUJ3 509 aa21.76■■□□□ 1.07
KHDC1-201ENST00000257765 ZMYM6O95789 1325 aa21.76■■□□□ 1.07
KHDC1-201ENST00000257765 SCN10AQ9Y5Y9 1956 aa21.76■■□□□ 1.07
KHDC1-201ENST00000257765 TTC28Q96AY4 2481 aa21.75■■□□□ 1.07
KHDC1-201ENST00000257765 FGAP02671 866 aa21.75■■□□□ 1.07
KHDC1-201ENST00000257765 PDHBP11177 359 aa21.75■■□□□ 1.07
KHDC1-201ENST00000257765 CPT1AP50416 773 aa21.75■■□□□ 1.07
KHDC1-201ENST00000257765 MCMDC2Q4G0Z9 681 aa21.75■■□□□ 1.07
KHDC1-201ENST00000257765 RPUSD2Q8IZ73 545 aaKnown RBP21.75■■□□□ 1.07
KHDC1-201ENST00000257765 SLC28A3Q9HAS3 691 aa21.75■■□□□ 1.07
KHDC1-201ENST00000257765 PRDM6Q9NQX0 595 aa21.75■■□□□ 1.07
KHDC1-201ENST00000257765 PNMA2Q9UL42 364 aa21.75■■□□□ 1.07
KHDC1-201ENST00000257765 TANC1Q9C0D5 1861 aa21.75■■□□□ 1.07
KHDC1-201ENST00000257765 SCN5AQ14524 2016 aa21.74■■□□□ 1.07
KHDC1-201ENST00000257765 CALML3P27482 149 aa21.74■■□□□ 1.07
KHDC1-201ENST00000257765 OR6J1Q8NGC5 347 aa21.74■■□□□ 1.07
KHDC1-201ENST00000257765 SCLYQ96I15 445 aa21.74■■□□□ 1.07
KHDC1-201ENST00000257765 YBX2Q9Y2T7 364 aaKnown RBP21.74■■□□□ 1.07
KHDC1-201ENST00000257765 LAMA4Q16363 1823 aa21.73■■□□□ 1.07
KHDC1-201ENST00000257765 RBM47A0AV96 593 aaKnown RBP21.73■■□□□ 1.07
KHDC1-201ENST00000257765 SUPT20HL2P0C7V6 817 aa21.73■■□□□ 1.07
KHDC1-201ENST00000257765 HSPD1P10809 573 aaKnown RBP21.73■■□□□ 1.07
KHDC1-201ENST00000257765 RRP1P56182 461 aaKnown RBP21.73■■□□□ 1.07
KHDC1-201ENST00000257765 PURAQ00577 322 aaKnown RBP21.73■■□□□ 1.07
KHDC1-201ENST00000257765 ADGRE1Q14246 886 aa21.73■■□□□ 1.07
KHDC1-201ENST00000257765 RNF207Q6ZRF8 634 aa21.73■■□□□ 1.07
KHDC1-201ENST00000257765 TICAM2Q86XR7 235 aa21.73■■□□□ 1.07
KHDC1-201ENST00000257765 CLEC4DQ8WXI8 215 aa21.73■■□□□ 1.07
KHDC1-201ENST00000257765 MPHOSPH6Q99547 160 aaKnown RBP21.73■■□□□ 1.07
KHDC1-201ENST00000257765 TRMT13Q9NUP7 481 aaKnown RBP21.73■■□□□ 1.07
KHDC1-201ENST00000257765 THEGQ9P2T0 379 aa21.73■■□□□ 1.07
KHDC1-201ENST00000257765 SLC4A7Q9Y6M7 1214 aa21.73■■□□□ 1.07
KHDC1-201ENST00000257765 TNKSO95271 1327 aa21.73■■□□□ 1.07
KHDC1-201ENST00000257765 WDR19Q8NEZ3 1342 aa21.73■■□□□ 1.07
KHDC1-201ENST00000257765 ZBBXA8MT70 800 aa21.72■■□□□ 1.07
KHDC1-201ENST00000257765 PFKMP08237 780 aa21.72■■□□□ 1.07
KHDC1-201ENST00000257765 MYL3P08590 195 aa21.72■■□□□ 1.07
KHDC1-201ENST00000257765 IGFBP4P22692 258 aa21.72■■□□□ 1.07
KHDC1-201ENST00000257765 HAND2P61296 217 aa21.72■■□□□ 1.07
KHDC1-201ENST00000257765 PDE4DQ08499 809 aa21.72■■□□□ 1.07
KHDC1-201ENST00000257765 ZNF543Q08ER8 600 aa21.72■■□□□ 1.07
KHDC1-201ENST00000257765 BRDTQ58F21 947 aaPredicted RBP21.72■■□□□ 1.07
KHDC1-201ENST00000257765 ZNF589Q86UQ0 364 aaPredicted RBP21.72■■□□□ 1.07
KHDC1-201ENST00000257765 MTG1Q9BT17 334 aaPredicted RBP21.72■■□□□ 1.07
KHDC1-201ENST00000257765 GPHNQ9NQX3 736 aaPredicted RBP21.72■■□□□ 1.07
KHDC1-201ENST00000257765 RAD50Q92878 1312 aa21.72■■□□□ 1.07
KHDC1-201ENST00000257765 CHD9Q3L8U1 2897 aa21.71■■□□□ 1.07
KHDC1-201ENST00000257765 NKRFO15226 690 aaKnown RBP eCLIP21.71■■□□□ 1.07
KHDC1-201ENST00000257765 PCP11498 1178 aaKnown RBP21.71■■□□□ 1.07
KHDC1-201ENST00000257765 CYP2C9P11712 490 aa21.71■■□□□ 1.07
KHDC1-201ENST00000257765 RPS6P62753 249 aaKnown RBP21.71■■□□□ 1.07
KHDC1-201ENST00000257765 NMIQ13287 307 aaPredicted RBP21.71■■□□□ 1.07
KHDC1-201ENST00000257765 PPP2R5BQ15173 497 aa21.71■■□□□ 1.07
KHDC1-201ENST00000257765 ATXN2LQ8WWM7 1075 aaKnown RBP21.71■■□□□ 1.07
KHDC1-201ENST00000257765 TTC14Q96N46 770 aa21.71■■□□□ 1.07
KHDC1-201ENST00000257765 CCDC171Q6TFL3 1326 aa21.71■■□□□ 1.07
KHDC1-201ENST00000257765 SNHG28P0DPA3 235 aa21.7■■□□□ 1.06
KHDC1-201ENST00000257765 EDNRBP24530 442 aa21.7■■□□□ 1.06
KHDC1-201ENST00000257765 RABGGTBP53611 331 aa21.7■■□□□ 1.06
KHDC1-201ENST00000257765 PPP2R2DQ66LE6 453 aa21.7■■□□□ 1.06
KHDC1-201ENST00000257765 MFSD6Q6ZSS7 791 aa21.7■■□□□ 1.06
KHDC1-201ENST00000257765 DNERQ8NFT8 737 aa21.7■■□□□ 1.06
KHDC1-201ENST00000257765 SCFD2Q8WU76 684 aa21.7■■□□□ 1.06
KHDC1-201ENST00000257765 VWCEQ96DN2 955 aa21.7■■□□□ 1.06
KHDC1-201ENST00000257765 CRBNQ96SW2 442 aa21.7■■□□□ 1.06
KHDC1-201ENST00000257765 PCDHA11Q9Y5I1 949 aa21.7■■□□□ 1.06
KHDC1-201ENST00000257765 MYH6P13533 1939 aa21.69■■□□□ 1.06
KHDC1-201ENST00000257765 TNFRSF10AO00220 468 aa21.69■■□□□ 1.06
KHDC1-201ENST00000257765 HDAC1Q13547 482 aaPredicted RBP21.69■■□□□ 1.06
KHDC1-201ENST00000257765 CCDC85BQ15834 202 aaPredicted RBP21.69■■□□□ 1.06
KHDC1-201ENST00000257765 FAM47CQ5HY64 1035 aa21.69■■□□□ 1.06
KHDC1-201ENST00000257765 TBC1D10CQ8IV04 446 aa21.69■■□□□ 1.06
KHDC1-201ENST00000257765 RNF41Q9H4P4 317 aaPredicted RBP21.69■■□□□ 1.06
KHDC1-201ENST00000257765 TRIM6-TRIM34B2RNG4 842 aa21.68■■□□□ 1.06
KHDC1-201ENST00000257765 B4DLN1 442 aa21.68■■□□□ 1.06
KHDC1-201ENST00000257765 ATP2A2P16615 1042 aaKnown RBP21.68■■□□□ 1.06
KHDC1-201ENST00000257765 MRPL12P52815 198 aaKnown RBP21.68■■□□□ 1.06
KHDC1-201ENST00000257765 NBPF20Q3BBV1 942 aa21.68■■□□□ 1.06
KHDC1-201ENST00000257765 GPATCH4Q5T3I0 446 aaKnown RBP21.68■■□□□ 1.06
KHDC1-201ENST00000257765 KPNA6O60684 536 aa21.67■■□□□ 1.06
KHDC1-201ENST00000257765 MYOGP15173 224 aa21.67■■□□□ 1.06
KHDC1-201ENST00000257765 TTLL4Q14679 1199 aa21.67■■□□□ 1.06
KHDC1-201ENST00000257765 USH1GQ495M9 461 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms