RNA–Protein interactions for RNA: ENST00000257075.9

PUM1-201, Transcript of pumilio RNA binding family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PUM1, Length 5,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-201ENST00000257075 MTFR1LQ9H019 292 aa11.69□□□□□ -0.54
PUM1-201ENST00000257075 RAVER2Q9HCJ3 691 aaKnown RBP11.69□□□□□ -0.54
PUM1-201ENST00000257075 LMCD1Q9NZU5 365 aa11.69□□□□□ -0.54
PUM1-201ENST00000257075 CPSF1Q10570 1443 aaKnown RBP11.69□□□□□ -0.54
PUM1-201ENST00000257075 LAD1O00515 517 aa11.68□□□□□ -0.54
PUM1-201ENST00000257075 STAM2O75886 525 aa11.68□□□□□ -0.54
PUM1-201ENST00000257075 DSTYKQ6XUX3 929 aa11.68□□□□□ -0.54
PUM1-201ENST00000257075 C4orf50Q6ZRC1 276 aa11.68□□□□□ -0.54
PUM1-201ENST00000257075 MICALCLQ6ZW33 695 aa11.68□□□□□ -0.54
PUM1-201ENST00000257075 KIF9Q9HAQ2 790 aa11.68□□□□□ -0.54
PUM1-201ENST00000257075 RNF146Q9NTX7 359 aa11.68□□□□□ -0.54
PUM1-201ENST00000257075 SPATA31A5Q5VU36 1347 aa11.68□□□□□ -0.54
PUM1-201ENST00000257075 SPATA31A7Q8IWB4 1347 aa11.68□□□□□ -0.54
PUM1-201ENST00000257075 PNMA6FA0A0J9YX94 578 aa11.68□□□□□ -0.54
PUM1-201ENST00000257075 DPYSL4O14531 572 aa11.68□□□□□ -0.54
PUM1-201ENST00000257075 LMNB1P20700 586 aa11.68□□□□□ -0.54
PUM1-201ENST00000257075 PTH1RQ03431 593 aa11.68□□□□□ -0.54
PUM1-201ENST00000257075 SFMBT2Q5VUG0 894 aa11.68□□□□□ -0.54
PUM1-201ENST00000257075 FAM173BQ6P4H8 233 aa11.68□□□□□ -0.54
PUM1-201ENST00000257075 RBM46Q8TBY0 533 aaKnown RBP11.68□□□□□ -0.54
PUM1-201ENST00000257075 TCP11Q8WWU5 503 aa11.68□□□□□ -0.54
PUM1-201ENST00000257075 TLR7Q9NYK1 1049 aaKnown RBP11.68□□□□□ -0.54
PUM1-201ENST00000257075 KIF28PB7ZC32 967 aa11.68□□□□□ -0.54
PUM1-201ENST00000257075 TUBB4AP04350 444 aa11.68□□□□□ -0.54
PUM1-201ENST00000257075 PRDX5P30044 214 aa11.68□□□□□ -0.54
PUM1-201ENST00000257075 KCNJ6P48051 423 aa11.68□□□□□ -0.54
PUM1-201ENST00000257075 MYO1EQ12965 1108 aa11.68□□□□□ -0.54
PUM1-201ENST00000257075 CASC4Q6P4E1 433 aa11.68□□□□□ -0.54
PUM1-201ENST00000257075 NLRP4Q96MN2 994 aa11.68□□□□□ -0.54
PUM1-201ENST00000257075 SRRTQ9BXP5 876 aaKnown RBP11.68□□□□□ -0.54
PUM1-201ENST00000257075 PIDD1Q9HB75 910 aa11.68□□□□□ -0.54
PUM1-201ENST00000257075 PFDN4Q9NQP4 134 aa11.68□□□□□ -0.54
PUM1-201ENST00000257075 HERC5Q9UII4 1024 aaKnown RBP11.68□□□□□ -0.54
PUM1-201ENST00000257075 SOS2Q07890 1332 aaPredicted RBP11.68□□□□□ -0.54
PUM1-201ENST00000257075 CDHR2Q9BYE9 1310 aa11.68□□□□□ -0.54
PUM1-201ENST00000257075 ASB14A6NK59 587 aa11.68□□□□□ -0.54
PUM1-201ENST00000257075 BTBD18B2RXH4 712 aa11.68□□□□□ -0.54
PUM1-201ENST00000257075 PFDN6O15212 129 aa11.68□□□□□ -0.54
PUM1-201ENST00000257075 PFKFB2O60825 505 aa11.68□□□□□ -0.54
PUM1-201ENST00000257075 GAP43P17677 238 aa11.68□□□□□ -0.54
PUM1-201ENST00000257075 LONP1P36776 959 aaKnown RBP11.68□□□□□ -0.54
PUM1-201ENST00000257075 PSMC4P43686 418 aa11.68□□□□□ -0.54
PUM1-201ENST00000257075 ITIH3Q06033 890 aa11.68□□□□□ -0.54
PUM1-201ENST00000257075 ZNF569Q5MCW4 686 aa11.68□□□□□ -0.54
PUM1-201ENST00000257075 NBPF11Q86T75 865 aa11.68□□□□□ -0.54
PUM1-201ENST00000257075 PPM1KQ8N3J5 372 aa11.68□□□□□ -0.54
PUM1-201ENST00000257075 RYBPQ8N488 228 aaPredicted RBP11.68□□□□□ -0.54
PUM1-201ENST00000257075 MARCH10Q8NA82 808 aaPredicted RBP11.68□□□□□ -0.54
PUM1-201ENST00000257075 TRERF1Q96PN7 1200 aa11.68□□□□□ -0.54
PUM1-201ENST00000257075 TAB2Q9NYJ8 693 aa11.68□□□□□ -0.54
PUM1-201ENST00000257075 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.68□□□□□ -0.54
PUM1-201ENST00000257075 KRT10P13645 584 aa11.68□□□□□ -0.54
PUM1-201ENST00000257075 NEDD9Q14511 834 aa11.68□□□□□ -0.54
PUM1-201ENST00000257075 KARSQ15046 597 aaKnown RBP11.68□□□□□ -0.54
PUM1-201ENST00000257075 PPANQ9NQ55 473 aaKnown RBP11.68□□□□□ -0.54
PUM1-201ENST00000257075 SERTAD1Q9UHV2 236 aa11.68□□□□□ -0.54
PUM1-201ENST00000257075 AFG3L2Q9Y4W6 797 aa11.68□□□□□ -0.54
PUM1-201ENST00000257075 RPAP1Q9BWH6 1393 aaPredicted RBP11.68□□□□□ -0.54
PUM1-201ENST00000257075 ZNF233A6NK53 670 aa11.67□□□□□ -0.54
PUM1-201ENST00000257075 SRGAP2CP0DJJ0 459 aa11.67□□□□□ -0.54
PUM1-201ENST00000257075 SLC12A2P55011 1212 aa11.67□□□□□ -0.54
PUM1-201ENST00000257075 SEPT2Q15019 361 aa11.67□□□□□ -0.54
PUM1-201ENST00000257075 CLUL1Q15846 466 aa11.67□□□□□ -0.54
PUM1-201ENST00000257075 GBP6Q6ZN66 633 aa11.67□□□□□ -0.54
PUM1-201ENST00000257075 GANCQ8TET4 914 aa11.67□□□□□ -0.54
PUM1-201ENST00000257075 PRPF31Q8WWY3 499 aaKnown RBP11.67□□□□□ -0.54
PUM1-201ENST00000257075 CDK12Q9NYV4 1490 aaPredicted RBP11.67□□□□□ -0.54
PUM1-201ENST00000257075 STAT3P40763 770 aa11.67□□□□□ -0.54
PUM1-201ENST00000257075 TFAMQ00059 246 aaKnown RBP11.67□□□□□ -0.54
PUM1-201ENST00000257075 ZBTB16Q05516 673 aa11.67□□□□□ -0.54
PUM1-201ENST00000257075 URGCPQ8TCY9 931 aa11.67□□□□□ -0.54
PUM1-201ENST00000257075 FAM149B1Q96BN6 582 aa11.67□□□□□ -0.54
PUM1-201ENST00000257075 ACCSQ96QU6 501 aa11.67□□□□□ -0.54
PUM1-201ENST00000257075 SUGT1Q9Y2Z0 365 aa11.67□□□□□ -0.54
PUM1-201ENST00000257075 KIF1BO60333 1816 aa11.67□□□□□ -0.54
PUM1-201ENST00000257075 SYNJ2BP-COX16A0A087WUM0 186 aa11.67□□□□□ -0.54
PUM1-201ENST00000257075 ESYT2A0FGR8 921 aa11.67□□□□□ -0.54
PUM1-201ENST00000257075 TRAPPC10P48553 1259 aa11.67□□□□□ -0.54
PUM1-201ENST00000257075 STRIP1Q5VSL9 837 aa11.67□□□□□ -0.54
PUM1-201ENST00000257075 PRR5LQ6MZQ0 368 aa11.67□□□□□ -0.54
PUM1-201ENST00000257075 SRGAP1Q7Z6B7 1085 aa11.67□□□□□ -0.54
PUM1-201ENST00000257075 TBCKQ8TEA7 893 aa11.67□□□□□ -0.54
PUM1-201ENST00000257075 GJA10Q969M2 543 aa11.67□□□□□ -0.54
PUM1-201ENST00000257075 GGA3Q9NZ52 723 aa11.67□□□□□ -0.54
PUM1-201ENST00000257075 COX16Q9P0S2 106 aa11.67□□□□□ -0.54
PUM1-201ENST00000257075 INPP5FQ9Y2H2 1132 aa11.67□□□□□ -0.54
PUM1-201ENST00000257075 CYP2D7A0A087X1C5 515 aa11.67□□□□□ -0.54
PUM1-201ENST00000257075 HOXA13P31271 388 aaPredicted RBP11.67□□□□□ -0.54
PUM1-201ENST00000257075 PDE6CP51160 858 aa11.67□□□□□ -0.54
PUM1-201ENST00000257075 RNASE9P60153 205 aaKnown RBP11.67□□□□□ -0.54
PUM1-201ENST00000257075 PTGDRQ13258 359 aa11.67□□□□□ -0.54
PUM1-201ENST00000257075 PRPF38AQ8NAV1 312 aaKnown RBP11.67□□□□□ -0.54
PUM1-201ENST00000257075 BAG1Q99933 345 aaPredicted RBP11.67□□□□□ -0.54
PUM1-201ENST00000257075 NSRP1Q9H0G5 558 aaKnown RBP11.67□□□□□ -0.54
PUM1-201ENST00000257075 ACAD9Q9H845 621 aa11.67□□□□□ -0.54
PUM1-201ENST00000257075 PIH1D3Q9NQM4 214 aaKnown RBP11.67□□□□□ -0.54
PUM1-201ENST00000257075 CPSF3Q9UKF6 684 aaKnown RBP11.67□□□□□ -0.54
PUM1-201ENST00000257075 PAXBP1Q9Y5B6 917 aa11.67□□□□□ -0.54
PUM1-201ENST00000257075 PTPRMP28827 1452 aa11.67□□□□□ -0.54
PUM1-201ENST00000257075 ACTN4O43707 911 aaKnown RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms