RNA–Protein interactions for RNA: ENST00000256637.7

SORT1-201, Transcript of sortilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SORT1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-201ENST00000256637 CDC42BPGQ6DT37 1551 aa18.59■□□□□ 0.57
SORT1-201ENST00000256637 F5H423 210 aaPredicted RBP18.59■□□□□ 0.57
SORT1-201ENST00000256637 ZNF202O95125 648 aa18.59■□□□□ 0.57
SORT1-201ENST00000256637 HSPD1P10809 573 aaKnown RBP18.59■□□□□ 0.57
SORT1-201ENST00000256637 YWHAEP62258 255 aaKnown RBP18.59■□□□□ 0.57
SORT1-201ENST00000256637 ZNF513Q8N8E2 541 aaPredicted RBP18.59■□□□□ 0.57
SORT1-201ENST00000256637 RMDN2Q96LZ7 410 aa18.59■□□□□ 0.57
SORT1-201ENST00000256637 SOS2Q07890 1332 aaPredicted RBP18.59■□□□□ 0.57
SORT1-201ENST00000256637 NUP160Q12769 1436 aa18.59■□□□□ 0.57
SORT1-201ENST00000256637 ESPNB1AK53 854 aa18.59■□□□□ 0.57
SORT1-201ENST00000256637 BUB1O43683 1085 aa18.59■□□□□ 0.57
SORT1-201ENST00000256637 BUB1BO60566 1050 aaPredicted RBP18.58■□□□□ 0.57
SORT1-201ENST00000256637 KLHL30Q0D2K2 578 aa18.58■□□□□ 0.57
SORT1-201ENST00000256637 TAF1CQ15572 869 aaPredicted RBP18.58■□□□□ 0.57
SORT1-201ENST00000256637 CDC37Q16543 378 aaPredicted RBP18.58■□□□□ 0.57
SORT1-201ENST00000256637 DENND2CQ68D51 928 aa18.58■□□□□ 0.57
SORT1-201ENST00000256637 UTP11Q9Y3A2 253 aaKnown RBP18.58■□□□□ 0.57
SORT1-201ENST00000256637 HECW2Q9P2P5 1572 aa18.58■□□□□ 0.57
SORT1-201ENST00000256637 KBTBD13C9JR72 458 aa18.58■□□□□ 0.57
SORT1-201ENST00000256637 GNL1P36915 607 aaPredicted RBP18.58■□□□□ 0.57
SORT1-201ENST00000256637 NXNQ6DKJ4 435 aa18.58■□□□□ 0.57
SORT1-201ENST00000256637 SLC7A5P2Q9GIP4 190 aa18.58■□□□□ 0.57
SORT1-201ENST00000256637 ADALQ6DHV7 355 aa18.58■□□□□ 0.56
SORT1-201ENST00000256637 YAF2Q8IY57 180 aa18.58■□□□□ 0.56
SORT1-201ENST00000256637 SLC38A10Q9HBR0 1119 aa18.58■□□□□ 0.56
SORT1-201ENST00000256637 IQCA1LA6NCM1 817 aa18.58■□□□□ 0.56
SORT1-201ENST00000256637 RBM46Q8TBY0 533 aaKnown RBP18.58■□□□□ 0.56
SORT1-201ENST00000256637 COL15A1P39059 1388 aa18.58■□□□□ 0.56
SORT1-201ENST00000256637 ACCSLQ4AC99 568 aa18.58■□□□□ 0.56
SORT1-201ENST00000256637 FAM8A1Q9UBU6 413 aa18.58■□□□□ 0.56
SORT1-201ENST00000256637 GOLGA8SH3BPF8 625 aa18.57■□□□□ 0.56
SORT1-201ENST00000256637 SCG2P13521 617 aa18.57■□□□□ 0.56
SORT1-201ENST00000256637 PTPREP23469 700 aa18.57■□□□□ 0.56
SORT1-201ENST00000256637 PDE6CP51160 858 aa18.57■□□□□ 0.56
SORT1-201ENST00000256637 RWDD4Q6NW29 188 aaKnown RBP18.57■□□□□ 0.56
SORT1-201ENST00000256637 MTRF1LQ9UGC7 380 aaKnown RBP18.57■□□□□ 0.56
SORT1-201ENST00000256637 CDK8P49336 464 aa18.57■□□□□ 0.56
SORT1-201ENST00000256637 CDO1Q16878 200 aa18.57■□□□□ 0.56
SORT1-201ENST00000256637 PDCD6IPQ8WUM4 868 aaKnown RBP18.57■□□□□ 0.56
SORT1-201ENST00000256637 EAF2Q96CJ1 260 aaPredicted RBP18.57■□□□□ 0.56
SORT1-201ENST00000256637 ANAPC5Q9UJX4 755 aa18.57■□□□□ 0.56
SORT1-201ENST00000256637 A6NJR5 290 aa18.57■□□□□ 0.56
SORT1-201ENST00000256637 CEP104O60308 925 aa18.57■□□□□ 0.56
SORT1-201ENST00000256637 DYNLT1P63172 113 aa18.57■□□□□ 0.56
SORT1-201ENST00000256637 PTPN21Q16825 1174 aa18.57■□□□□ 0.56
SORT1-201ENST00000256637 APOBEC3FQ8IUX4 373 aaKnown RBP18.57■□□□□ 0.56
SORT1-201ENST00000256637 PZPP20742 1482 aa18.57■□□□□ 0.56
SORT1-201ENST00000256637 SCARF1Q14162 830 aa18.57■□□□□ 0.56
SORT1-201ENST00000256637 TTC37Q6PGP7 1564 aa18.57■□□□□ 0.56
SORT1-201ENST00000256637 MED23Q9ULK4 1368 aa18.57■□□□□ 0.56
SORT1-201ENST00000256637 CASP2P42575 452 aa18.57■□□□□ 0.56
SORT1-201ENST00000256637 SFMBT2Q5VUG0 894 aa18.57■□□□□ 0.56
SORT1-201ENST00000256637 CCDC105Q8IYK2 499 aa18.57■□□□□ 0.56
SORT1-201ENST00000256637 HEXIM2Q96MH2 286 aaKnown RBP18.57■□□□□ 0.56
SORT1-201ENST00000256637 SMC6Q96SB8 1091 aa18.57■□□□□ 0.56
SORT1-201ENST00000256637 FASTKD5Q7L8L6 764 aaKnown RBP18.56■□□□□ 0.56
SORT1-201ENST00000256637 CATSPER4Q7RTX7 472 aa18.56■□□□□ 0.56
SORT1-201ENST00000256637 URGCPQ8TCY9 931 aa18.56■□□□□ 0.56
SORT1-201ENST00000256637 FANCBQ8NB91 859 aa18.56■□□□□ 0.56
SORT1-201ENST00000256637 RPS6KA4O75676 772 aa18.56■□□□□ 0.56
SORT1-201ENST00000256637 OR52Z1P0C646 297 aa18.56■□□□□ 0.56
SORT1-201ENST00000256637 RHPN2Q8IUC4 686 aa18.56■□□□□ 0.56
SORT1-201ENST00000256637 BAG1Q99933 345 aaPredicted RBP18.56■□□□□ 0.56
SORT1-201ENST00000256637 COA1Q9GZY4 146 aa18.56■□□□□ 0.56
SORT1-201ENST00000256637 XRCC5P13010 732 aaKnown RBP18.56■□□□□ 0.56
SORT1-201ENST00000256637 SLC27A3Q5K4L6 730 aa18.56■□□□□ 0.56
SORT1-201ENST00000256637 CSRNP2Q9H175 543 aa18.56■□□□□ 0.56
SORT1-201ENST00000256637 DNAJC5Q9H3Z4 198 aa18.56■□□□□ 0.56
SORT1-201ENST00000256637 VPS37BQ9H9H4 285 aa18.56■□□□□ 0.56
SORT1-201ENST00000256637 COPB2P35606 906 aa18.56■□□□□ 0.56
SORT1-201ENST00000256637 CLUL1Q15846 466 aa18.56■□□□□ 0.56
SORT1-201ENST00000256637 RFX6Q8HWS3 928 aa18.56■□□□□ 0.56
SORT1-201ENST00000256637 ATP5JP18859 108 aa18.55■□□□□ 0.56
SORT1-201ENST00000256637 CTAGE3PQ8IX95 158 aa18.55■□□□□ 0.56
SORT1-201ENST00000256637 HUNKP57058 714 aa18.55■□□□□ 0.56
SORT1-201ENST00000256637 CCNYQ8ND76 341 aa18.55■□□□□ 0.56
SORT1-201ENST00000256637 N4BP2L2Q92802 583 aaPredicted RBP18.55■□□□□ 0.56
SORT1-201ENST00000256637 TRIM56Q9BRZ2 755 aaKnown RBP18.55■□□□□ 0.56
SORT1-201ENST00000256637 NT5C3AQ9H0P0 336 aa18.55■□□□□ 0.56
SORT1-201ENST00000256637 CLTCQ00610 1675 aaKnown RBP18.55■□□□□ 0.56
SORT1-201ENST00000256637 GRIN3BO60391 1043 aa18.55■□□□□ 0.56
SORT1-201ENST00000256637 ACRBPQ8NEB7 543 aa18.55■□□□□ 0.56
SORT1-201ENST00000256637 RAB20Q9NX57 234 aa18.55■□□□□ 0.56
SORT1-201ENST00000256637 TTC36A6NLP5 189 aa18.55■□□□□ 0.56
SORT1-201ENST00000256637 KCNJ6P48051 423 aa18.55■□□□□ 0.56
SORT1-201ENST00000256637 RASSF7Q02833 373 aa18.55■□□□□ 0.56
SORT1-201ENST00000256637 HS1BP3Q53T59 392 aa18.55■□□□□ 0.56
SORT1-201ENST00000256637 SPATA24Q86W54 205 aa18.55■□□□□ 0.56
SORT1-201ENST00000256637 SPDYE1Q8NFV5 336 aaPredicted RBP18.55■□□□□ 0.56
SORT1-201ENST00000256637 OR6J1Q8NGC5 347 aa18.55■□□□□ 0.56
SORT1-201ENST00000256637 CCDC85CA6NKD9 419 aa18.55■□□□□ 0.56
SORT1-201ENST00000256637 MYL7Q01449 175 aa18.55■□□□□ 0.56
SORT1-201ENST00000256637 RNF219Q5W0B1 726 aaPredicted RBP18.55■□□□□ 0.56
SORT1-201ENST00000256637 FIS1Q9Y3D6 152 aa18.55■□□□□ 0.56
SORT1-201ENST00000256637 CUTAO60888 179 aa18.54■□□□□ 0.56
SORT1-201ENST00000256637 LRRN2O75325 713 aa18.54■□□□□ 0.56
SORT1-201ENST00000256637 ANGEL2Q5VTE6 544 aaKnown RBP18.54■□□□□ 0.56
SORT1-201ENST00000256637 PTPN22Q9Y2R2 807 aa18.54■□□□□ 0.56
SORT1-201ENST00000256637 PSAPP07602 524 aa18.54■□□□□ 0.56
SORT1-201ENST00000256637 SEPT6Q14141 434 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms