RNA–Protein interactions for RNA: ENST00000254941.6

NIP7-202, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 1 (best) BASIC

Gene NIP7, Length 1,887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-202ENST00000254941 EDIL3O43854 480 aa10.76□□□□□ -0.69
NIP7-202ENST00000254941 CCNT1O60563 726 aaKnown RBP10.76□□□□□ -0.69
NIP7-202ENST00000254941 FOSP01100 380 aaPredicted RBP10.76□□□□□ -0.69
NIP7-202ENST00000254941 PFKFB1P16118 471 aa10.76□□□□□ -0.69
NIP7-202ENST00000254941 TAL1P17542 331 aaPredicted RBP10.76□□□□□ -0.69
NIP7-202ENST00000254941 GRIN1Q05586 938 aa10.76□□□□□ -0.69
NIP7-202ENST00000254941 LETM2Q2VYF4 491 aa10.76□□□□□ -0.69
NIP7-202ENST00000254941 CATSPERGQ6ZRH7 1159 aa10.76□□□□□ -0.69
NIP7-202ENST00000254941 CLSTN2Q9H4D0 955 aa10.76□□□□□ -0.69
NIP7-202ENST00000254941 ELP3Q9H9T3 547 aa10.76□□□□□ -0.69
NIP7-202ENST00000254941 PNMA2Q9UL42 364 aa10.76□□□□□ -0.69
NIP7-202ENST00000254941 ADAMTS5Q9UNA0 930 aa10.76□□□□□ -0.69
NIP7-202ENST00000254941 ABCB11O95342 1321 aa10.76□□□□□ -0.69
NIP7-202ENST00000254941 CXCL11O14625 94 aa10.75□□□□□ -0.69
NIP7-202ENST00000254941 KINO60870 393 aaKnown RBP10.75□□□□□ -0.69
NIP7-202ENST00000254941 PRPHP41219 470 aa10.75□□□□□ -0.69
NIP7-202ENST00000254941 PPIL2Q13356 520 aa10.75□□□□□ -0.69
NIP7-202ENST00000254941 COG2Q14746 738 aa10.75□□□□□ -0.69
NIP7-202ENST00000254941 PPP4R3AQ6IN85 833 aa10.75□□□□□ -0.69
NIP7-202ENST00000254941 RBM43Q6ZSC3 357 aaKnown RBP10.75□□□□□ -0.69
NIP7-202ENST00000254941 MYPNQ86TC9 1320 aa10.75□□□□□ -0.69
NIP7-202ENST00000254941 CRYGNQ8WXF5 182 aa10.75□□□□□ -0.69
NIP7-202ENST00000254941 OTUD5Q96G74 571 aa10.75□□□□□ -0.69
NIP7-202ENST00000254941 AGBL1Q96MI9 1066 aa10.75□□□□□ -0.69
NIP7-202ENST00000254941 P2RX7Q99572 595 aaKnown RBP10.75□□□□□ -0.69
NIP7-202ENST00000254941 ANO3Q9BYT9 981 aa10.75□□□□□ -0.69
NIP7-202ENST00000254941 CSRNP2Q9H175 543 aa10.75□□□□□ -0.69
NIP7-202ENST00000254941 CCPG1Q9ULG6 757 aa10.75□□□□□ -0.69
NIP7-202ENST00000254941 KCNH4Q9UQ05 1017 aa10.75□□□□□ -0.69
NIP7-202ENST00000254941 A0A0G2JMZ2 1700 aa10.75□□□□□ -0.69
NIP7-202ENST00000254941 A0A0G2JLL6 359 aaPredicted RBP10.74□□□□□ -0.69
NIP7-202ENST00000254941 NEMFO60524 1076 aa10.74□□□□□ -0.69
NIP7-202ENST00000254941 ZBED4O75132 1171 aa10.74□□□□□ -0.69
NIP7-202ENST00000254941 ZNF202O95125 648 aa10.74□□□□□ -0.69
NIP7-202ENST00000254941 USP11P51784 963 aa10.74□□□□□ -0.69
NIP7-202ENST00000254941 IL17AQ16552 155 aa10.74□□□□□ -0.69
NIP7-202ENST00000254941 CAMK4Q16566 473 aa10.74□□□□□ -0.69
NIP7-202ENST00000254941 LRSAM1Q6UWE0 723 aa10.74□□□□□ -0.69
NIP7-202ENST00000254941 PRRT2Q7Z6L0 340 aaPredicted RBP10.74□□□□□ -0.69
NIP7-202ENST00000254941 PROCA1Q8NCQ7 364 aaPredicted RBP10.74□□□□□ -0.69
NIP7-202ENST00000254941 ATG4CQ96DT6 458 aa10.74□□□□□ -0.69
NIP7-202ENST00000254941 TMEM60Q9H2L4 133 aa10.74□□□□□ -0.69
NIP7-202ENST00000254941 TNMDQ9H2S6 317 aa10.74□□□□□ -0.69
NIP7-202ENST00000254941 NMRK2Q9NPI5 230 aa10.74□□□□□ -0.69
NIP7-202ENST00000254941 HOXC10Q9NYD6 342 aa10.74□□□□□ -0.69
NIP7-202ENST00000254941 FSD2A1L4K1 749 aa10.74□□□□□ -0.69
NIP7-202ENST00000254941 VWA3AA6NCI4 1184 aa10.74□□□□□ -0.69
NIP7-202ENST00000254941 SPDYE3A6NKU9 549 aa10.74□□□□□ -0.69
NIP7-202ENST00000254941 CTAGE5O15320 804 aa10.74□□□□□ -0.69
NIP7-202ENST00000254941 GCFC2P16383 781 aaKnown RBP10.74□□□□□ -0.69
NIP7-202ENST00000254941 HOXA7P31268 230 aaPredicted RBP10.74□□□□□ -0.69
NIP7-202ENST00000254941 HOXA13P31271 388 aaPredicted RBP10.74□□□□□ -0.69
NIP7-202ENST00000254941 SYKP43405 635 aa10.74□□□□□ -0.69
NIP7-202ENST00000254941 OAZ1P54368 228 aa10.74□□□□□ -0.69
NIP7-202ENST00000254941 FKBP1BP68106 108 aa10.74□□□□□ -0.69
NIP7-202ENST00000254941 GHRHRQ02643 423 aa10.74□□□□□ -0.69
NIP7-202ENST00000254941 FMR1Q06787 632 aaKnown RBP eCLIP10.74□□□□□ -0.69
NIP7-202ENST00000254941 SPECC1Q5M775 1068 aa10.74□□□□□ -0.69
NIP7-202ENST00000254941 GAS2L3Q86XJ1 694 aa10.74□□□□□ -0.69
NIP7-202ENST00000254941 CPXCR1Q8N123 301 aa10.74□□□□□ -0.69
NIP7-202ENST00000254941 REPS2Q8NFH8 660 aa10.74□□□□□ -0.69
NIP7-202ENST00000254941 WNK4Q96J92 1243 aa10.74□□□□□ -0.69
NIP7-202ENST00000254941 TIGD1Q96MW7 591 aa10.74□□□□□ -0.69
NIP7-202ENST00000254941 RAVER2Q9HCJ3 691 aaKnown RBP10.74□□□□□ -0.69
NIP7-202ENST00000254941 FAM13BQ9NYF5 915 aa10.74□□□□□ -0.69
NIP7-202ENST00000254941 KCNH3Q9ULD8 1083 aa10.74□□□□□ -0.69
NIP7-202ENST00000254941 C19orf67A6NJJ6 358 aa10.73□□□□□ -0.69
NIP7-202ENST00000254941 GCOM1H8Y6P7 765 aaPredicted RBP10.73□□□□□ -0.69
NIP7-202ENST00000254941 ATP2A1O14983 1001 aa10.73□□□□□ -0.69
NIP7-202ENST00000254941 GABBR2O75899 941 aa10.73□□□□□ -0.69
NIP7-202ENST00000254941 TDP2O95551 362 aa10.73□□□□□ -0.69
NIP7-202ENST00000254941 CFBP00751 764 aa10.73□□□□□ -0.69
NIP7-202ENST00000254941 OR52Z1P0C646 297 aa10.73□□□□□ -0.69
NIP7-202ENST00000254941 POLR2MP0CAP2 368 aa10.73□□□□□ -0.69
NIP7-202ENST00000254941 LONP1P36776 959 aaKnown RBP10.73□□□□□ -0.69
NIP7-202ENST00000254941 SREBF1P36956 1147 aa10.73□□□□□ -0.69
NIP7-202ENST00000254941 TREML2Q5T2D2 321 aa10.73□□□□□ -0.69
NIP7-202ENST00000254941 MOXD1Q6UVY6 613 aa10.73□□□□□ -0.69
NIP7-202ENST00000254941 DTHD1Q6ZMT9 781 aa10.73□□□□□ -0.69
NIP7-202ENST00000254941 USP49Q70CQ1 688 aa10.73□□□□□ -0.69
NIP7-202ENST00000254941 CLEC4DQ8WXI8 215 aa10.73□□□□□ -0.69
NIP7-202ENST00000254941 TBC1D5Q92609 795 aa10.73□□□□□ -0.69
NIP7-202ENST00000254941 OPTNQ96CV9 577 aa10.73□□□□□ -0.69
NIP7-202ENST00000254941 NAP1L4Q99733 375 aaKnown RBP10.73□□□□□ -0.69
NIP7-202ENST00000254941 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.73□□□□□ -0.69
NIP7-202ENST00000254941 CTDP1Q9Y5B0 961 aaPredicted RBP10.73□□□□□ -0.69
NIP7-202ENST00000254941 CYP3A7-CYP3A51PA0A087WV96 503 aa10.72□□□□□ -0.69
NIP7-202ENST00000254941 SPDYE16A6NNV3 312 aaPredicted RBP10.72□□□□□ -0.69
NIP7-202ENST00000254941 CYP3A7P24462 503 aa10.72□□□□□ -0.69
NIP7-202ENST00000254941 HSD17B4P51659 736 aa10.72□□□□□ -0.69
NIP7-202ENST00000254941 ARHGAP4P98171 946 aa10.72□□□□□ -0.69
NIP7-202ENST00000254941 MCF2L2Q86YR7 1114 aa10.72□□□□□ -0.69
NIP7-202ENST00000254941 SAMD3Q8N6K7 520 aa10.72□□□□□ -0.69
NIP7-202ENST00000254941 SLC10A4Q96EP9 437 aa10.72□□□□□ -0.69
NIP7-202ENST00000254941 EPSTI1Q96J88 318 aa10.72□□□□□ -0.69
NIP7-202ENST00000254941 MTMR9Q96QG7 549 aa10.72□□□□□ -0.69
NIP7-202ENST00000254941 ZNF408Q9H9D4 720 aa10.72□□□□□ -0.69
NIP7-202ENST00000254941 MAP3K20Q9NYL2 800 aaKnown RBP10.72□□□□□ -0.69
NIP7-202ENST00000254941 ZNF214Q9UL59 606 aaPredicted RBP10.72□□□□□ -0.69
NIP7-202ENST00000254941 GOLGA6L3A6NEY3 463 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms