RNA–Protein interactions for RNA: ENST00000254066.9

RARA-201, Transcript of retinoic acid receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RARA, Length 2,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-201ENST00000254066 PPARAQ07869 468 aa22.66■■□□□ 1.22
RARA-201ENST00000254066 SLMAPQ14BN4 828 aa22.66■■□□□ 1.22
RARA-201ENST00000254066 CFAP221Q4G0U5 840 aa22.66■■□□□ 1.22
RARA-201ENST00000254066 ZSWIM5Q9P217 1185 aa22.66■■□□□ 1.22
RARA-201ENST00000254066 ZBTB12Q9Y330 459 aaPredicted RBP22.66■■□□□ 1.22
RARA-201ENST00000254066 TRAPPC3O43617 180 aa22.65■■□□□ 1.22
RARA-201ENST00000254066 ZC3H6P61129 1189 aaKnown RBP22.65■■□□□ 1.22
RARA-201ENST00000254066 SLC39A6Q13433 755 aa22.65■■□□□ 1.22
RARA-201ENST00000254066 CCDC96Q2M329 555 aa22.65■■□□□ 1.22
RARA-201ENST00000254066 CRELD2Q6UXH1 353 aaPredicted RBP22.65■■□□□ 1.22
RARA-201ENST00000254066 ZNF512BQ96KM6 892 aaPredicted RBP22.65■■□□□ 1.22
RARA-201ENST00000254066 KDM4CQ9H3R0 1056 aa22.65■■□□□ 1.22
RARA-201ENST00000254066 LRWD1Q9UFC0 647 aa22.65■■□□□ 1.22
RARA-201ENST00000254066 GCP02774 474 aa22.65■■□□□ 1.22
RARA-201ENST00000254066 KRT2P35908 639 aa22.65■■□□□ 1.22
RARA-201ENST00000254066 ATP2C1P98194 919 aaPredicted RBP22.65■■□□□ 1.22
RARA-201ENST00000254066 BORCS6Q96GS4 357 aa22.65■■□□□ 1.22
RARA-201ENST00000254066 CAPN6Q9Y6Q1 641 aa22.65■■□□□ 1.22
RARA-201ENST00000254066 TIAM2Q8IVF5 1701 aa22.64■■□□□ 1.22
RARA-201ENST00000254066 BRWD3Q6RI45 1802 aa22.64■■□□□ 1.22
RARA-201ENST00000254066 DNM1LO00429 736 aa22.64■■□□□ 1.21
RARA-201ENST00000254066 PAEPP09466 180 aa22.64■■□□□ 1.21
RARA-201ENST00000254066 HSPA9P38646 679 aaKnown RBP22.64■■□□□ 1.21
RARA-201ENST00000254066 ATP2B2Q01814 1243 aa22.64■■□□□ 1.21
RARA-201ENST00000254066 BIRC3Q13489 604 aa22.64■■□□□ 1.21
RARA-201ENST00000254066 KRT27Q7Z3Y8 459 aa22.64■■□□□ 1.21
RARA-201ENST00000254066 ZNF496Q96IT1 587 aaPredicted RBP22.64■■□□□ 1.21
RARA-201ENST00000254066 FAM210AQ96ND0 272 aa22.64■■□□□ 1.21
RARA-201ENST00000254066 PLCB1Q9NQ66 1216 aa22.64■■□□□ 1.21
RARA-201ENST00000254066 AGPAT5Q9NUQ2 364 aa22.64■■□□□ 1.21
RARA-201ENST00000254066 EPB41L3Q9Y2J2 1087 aaPredicted RBP22.64■■□□□ 1.21
RARA-201ENST00000254066 PKD1L3Q7Z443 1732 aa22.64■■□□□ 1.21
RARA-201ENST00000254066 COBLO75128 1261 aa22.63■■□□□ 1.21
RARA-201ENST00000254066 A1BGP04217 495 aa22.63■■□□□ 1.21
RARA-201ENST00000254066 SCARF1Q14162 830 aa22.63■■□□□ 1.21
RARA-201ENST00000254066 KCNB1Q14721 858 aa22.63■■□□□ 1.21
RARA-201ENST00000254066 IFIH1Q9BYX4 1025 aaKnown RBP22.63■■□□□ 1.21
RARA-201ENST00000254066 BLZF1Q9H2G9 400 aa22.63■■□□□ 1.21
RARA-201ENST00000254066 PCDHA13Q9Y5I0 950 aa22.63■■□□□ 1.21
RARA-201ENST00000254066 PJA2O43164 708 aa22.63■■□□□ 1.21
RARA-201ENST00000254066 GBP2P32456 591 aaPredicted RBP22.63■■□□□ 1.21
RARA-201ENST00000254066 SCTRP47872 440 aa22.63■■□□□ 1.21
RARA-201ENST00000254066 CDC37Q16543 378 aaPredicted RBP22.63■■□□□ 1.21
RARA-201ENST00000254066 ARMC2Q8NEN0 867 aa22.63■■□□□ 1.21
RARA-201ENST00000254066 HINFPQ9BQA5 517 aa22.63■■□□□ 1.21
RARA-201ENST00000254066 PHF20Q9BVI0 1012 aa22.63■■□□□ 1.21
RARA-201ENST00000254066 TJP1Q07157 1748 aa22.63■■□□□ 1.21
RARA-201ENST00000254066 GRID2IPA4D2P6 1211 aa22.62■■□□□ 1.21
RARA-201ENST00000254066 ADORA1P30542 326 aa22.62■■□□□ 1.21
RARA-201ENST00000254066 MATR3P43243 847 aaKnown RBP eCLIP22.62■■□□□ 1.21
RARA-201ENST00000254066 CARSP49589 748 aaKnown RBP22.62■■□□□ 1.21
RARA-201ENST00000254066 CACNA2D3Q8IZS8 1091 aa22.62■■□□□ 1.21
RARA-201ENST00000254066 RNF10Q8N5U6 811 aaKnown RBP22.62■■□□□ 1.21
RARA-201ENST00000254066 SCLT1Q96NL6 688 aa22.62■■□□□ 1.21
RARA-201ENST00000254066 RBM12Q9NTZ6 932 aaKnown RBP22.62■■□□□ 1.21
RARA-201ENST00000254066 HAUS2Q9NVX0 235 aa22.62■■□□□ 1.21
RARA-201ENST00000254066 SLC12A6Q9UHW9 1150 aa22.62■■□□□ 1.21
RARA-201ENST00000254066 NFU1Q9UMS0 254 aa22.62■■□□□ 1.21
RARA-201ENST00000254066 ZNF263O14978 683 aa22.62■■□□□ 1.21
RARA-201ENST00000254066 MYL1P05976 194 aa22.62■■□□□ 1.21
RARA-201ENST00000254066 SARNPP82979 210 aaKnown RBP22.62■■□□□ 1.21
RARA-201ENST00000254066 CYP27A1Q02318 531 aa22.62■■□□□ 1.21
RARA-201ENST00000254066 CHRNA2Q15822 529 aa22.62■■□□□ 1.21
RARA-201ENST00000254066 NFRKBQ6P4R8 1299 aa22.62■■□□□ 1.21
RARA-201ENST00000254066 CCHCR1Q8TD31 782 aa22.62■■□□□ 1.21
RARA-201ENST00000254066 ZNF594Q96JF6 807 aaPredicted RBP22.62■■□□□ 1.21
RARA-201ENST00000254066 ERGIC2Q96RQ1 377 aa22.62■■□□□ 1.21
RARA-201ENST00000254066 MTRQ99707 1265 aa22.62■■□□□ 1.21
RARA-201ENST00000254066 PLAGL2Q9UPG8 496 aa22.62■■□□□ 1.21
RARA-201ENST00000254066 SPATA31A1Q5TZJ5 1347 aa22.62■■□□□ 1.21
RARA-201ENST00000254066 RASSF10A6NK89 507 aa22.61■■□□□ 1.21
RARA-201ENST00000254066 GLI1P08151 1106 aa22.61■■□□□ 1.21
RARA-201ENST00000254066 RIPK1Q13546 671 aa22.61■■□□□ 1.21
RARA-201ENST00000254066 WTAPQ15007 396 aa22.61■■□□□ 1.21
RARA-201ENST00000254066 FAM98CQ17RN3 349 aaKnown RBP22.61■■□□□ 1.21
RARA-201ENST00000254066 FAM114A1Q8IWE2 563 aa22.61■■□□□ 1.21
RARA-201ENST00000254066 SEC16BQ96JE7 1060 aa22.61■■□□□ 1.21
RARA-201ENST00000254066 EBF2Q9HAK2 575 aa22.61■■□□□ 1.21
RARA-201ENST00000254066 HEXIM1O94992 359 aaKnown RBP22.61■■□□□ 1.21
RARA-201ENST00000254066 EVA1CP58658 441 aa22.61■■□□□ 1.21
RARA-201ENST00000254066 RUFY4Q6ZNE9 571 aa22.61■■□□□ 1.21
RARA-201ENST00000254066 FANCBQ8NB91 859 aa22.61■■□□□ 1.21
RARA-201ENST00000254066 RASSF8Q8NHQ8 419 aa22.61■■□□□ 1.21
RARA-201ENST00000254066 TUBGCP2Q9BSJ2 902 aa22.61■■□□□ 1.21
RARA-201ENST00000254066 PUS3Q9BZE2 481 aaKnown RBP22.61■■□□□ 1.21
RARA-201ENST00000254066 EPB41L5Q9HCM4 733 aa22.61■■□□□ 1.21
RARA-201ENST00000254066 PPANQ9NQ55 473 aaKnown RBP22.61■■□□□ 1.21
RARA-201ENST00000254066 A0A0G2JS52 829 aa22.6■■□□□ 1.21
RARA-201ENST00000254066 PES1O00541 588 aaKnown RBP22.6■■□□□ 1.21
RARA-201ENST00000254066 MPHOSPH10O00566 681 aaKnown RBP22.6■■□□□ 1.21
RARA-201ENST00000254066 PSMA7O14818 248 aa22.6■■□□□ 1.21
RARA-201ENST00000254066 FAM153BP0C7A2 387 aa22.6■■□□□ 1.21
RARA-201ENST00000254066 TBC1D8BQ0IIM8 1120 aa22.6■■□□□ 1.21
RARA-201ENST00000254066 FAM153CQ494X1 144 aa22.6■■□□□ 1.21
RARA-201ENST00000254066 NAIF1Q69YI7 327 aaPredicted RBP22.6■■□□□ 1.21
RARA-201ENST00000254066 FAM153AQ9UHL3 310 aa22.6■■□□□ 1.21
RARA-201ENST00000254066 ERICH2A1L162 156 aa22.6■■□□□ 1.21
RARA-201ENST00000254066 GCOM1H8Y6P7 765 aaPredicted RBP22.6■■□□□ 1.21
RARA-201ENST00000254066 MOCS3O95396 460 aa22.6■■□□□ 1.21
RARA-201ENST00000254066 MYZAPP0CAP1 466 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms